Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:15361566-19821681

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D15Mit81 15 15365251 to 15365366 115 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 81
D15Ertd50e 15 15453647 to 15453847 200 DNA segment DNA segment, Chr 15, ERATO Doi 50, expressed
4930557F08Rik 15 15778114 to 15814864 36750 + lincRNA gene RIKEN cDNA 4930557F08 gene
Gm25550 15 15819227 to 15819354 127 + snoRNA gene predicted gene, 25550
Gm49122 15 15875791 to 15876072 281 + pseudogene predicted gene, 49122
Gm29753 15 15943431 to 15943915 484 + pseudogene predicted gene, 29753
Gm6479 15 16206927 to 16207953 1026 - pseudogene predicted gene 6479
n-TNgtt2 15 16275950 to 16276023 73 - tRNA gene nuclear encoded tRNA asparagine 2 (anticodon GTT)
Gm41276 15 16489015 to 16496812 7797 - lincRNA gene predicted gene, 41276
Gm49126 15 16496911 to 16549904 52993 + lincRNA gene predicted gene, 49126
Gm2611 15 16599958 to 16600562 604 - pseudogene predicted gene 2611
Cdh9 15 16728756 to 16857094 128338 + protein coding gene cadherin 9
Tssr130758 15 16728907 to 16728921 14 + TSS region transcription start site region 130758
Tssr130759 15 16824997 to 16825008 11 + TSS region transcription start site region 130759
Gm49127 15 16830234 to 16850964 20730 - antisense lncRNA gene predicted gene, 49127
Gm49128 15 17025339 to 17076939 51600 - lincRNA gene predicted gene, 49128
Tssr130760 15 17103605 to 17103621 16 + TSS region transcription start site region 130760
D15Mit266 15 17176658 to 17176780 122 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 266
Gm22032 15 17591566 to 17591681 115 - miRNA gene predicted gene, 22032
Gm2638 15 17895690 to 17897697 2007 - pseudogene predicted gene 2638
Gm22895 15 17935578 to 17935885 307 + unclassified non-coding RNA gene predicted gene, 22895
Gm18532 15 18007430 to 18007845 415 + pseudogene predicted gene, 18532
Gm24713 15 18009263 to 18009369 106 - snRNA gene predicted gene, 24713
D15Mit251 15 18047068 to 18047186 118 DNA segment DNA Segment, Chr 15 Massachusetts Institute of Technology 251
Gm41277 15 18057962 to 18064083 6121 - lincRNA gene predicted gene, 41277
4921515E04Rik 15 18078137 to 18369627 291490 - lncRNA gene RIKEN cDNA 4921515E04 gene
Gm8318 15 18163881 to 18164752 871 + pseudogene predicted gene 8318
Gm49138 15 18385349 to 18385441 92 - pseudogene predicted gene, 49138
Gm49139 15 18479336 to 18479799 463 + pseudogene predicted gene, 49139
Gm49140 15 18635706 to 18636006 300 + pseudogene predicted gene, 49140
C030047K22Rik 15 18697949 to 18818669 120720 - lincRNA gene RIKEN cDNA C030047K22 gene
Tssr130761 15 18818664 to 18818691 27 + TSS region transcription start site region 130761
Tssr130762 15 18818700 to 18818726 26 + TSS region transcription start site region 130762
Tssr130763 15 18818895 to 18818942 47 + TSS region transcription start site region 130763
Cdh10 15 18818947 to 19014236 195289 + protein coding gene cadherin 10
Tssr130764 15 18818953 to 18818962 9 + TSS region transcription start site region 130764
Tssr4558 15 18820749 to 18820752 3 + TSS region transcription start site region 4558
Tssr130765 15 18923337 to 18923341 4 + TSS region transcription start site region 130765
Gm8328 15 19066151 to 19066569 418 - pseudogene predicted gene 8328
Gm35496 15 19185373 to 19203329 17956 + lincRNA gene predicted gene, 35496
Gm18533 15 19204246 to 19205844 1598 + pseudogene predicted gene, 18533
Gm49160 15 19237749 to 19240281 2532 + lincRNA gene predicted gene, 49160
Gm49162 15 19302948 to 19395422 92474 - lincRNA gene predicted gene, 49162
Gm49161 15 19305320 to 19306302 982 + unclassified gene predicted gene, 49161
Tssr133808 15 19366003 to 19366008 5 - TSS region transcription start site region 133808
Gm8341 15 19454755 to 19456352 1597 - pseudogene predicted gene 8341
Tssr130766 15 19632471 to 19632476 5 + TSS region transcription start site region 130766
Gm49166 15 19678232 to 19691806 13574 + lincRNA gene predicted gene, 49166
Gm18741 15 19749723 to 19750440 717 + pseudogene predicted gene, 18741
Gm46498 15 19756404 to 19756819 415 + pseudogene predicted gene, 46498