MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 15:13107334-13486975

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cdh6	15	13028701 to 13173675	144974	-	protein coding gene	cadherin 6
Tssr133801	15	13132923 to 13132929	6	-	TSS region	transcription start site region 133801
Tssr133802	15	13148149 to 13148153	4	-	TSS region	transcription start site region 133802
Gm46513	15	13149264 to 13169977	20713	+	lncRNA gene	predicted gene, 46513
Tssr130754	15	13155227 to 13155238	11	+	TSS region	transcription start site region 130754
Tssr130755	15	13155242 to 13155247	5	+	TSS region	transcription start site region 130755
Cpgi6963	15	13172341 to 13172784	443		CpG island	CpG island 6963
Cpgi6964	15	13173030 to 13173558	528		CpG island	CpG island 6964
Tssr133803	15	13173586 to 13173602	16	-	TSS region	transcription start site region 133803
Tssr133804	15	13173607 to 13173644	37	-	TSS region	transcription start site region 133804
Tssr133805	15	13173650 to 13173658	8	-	TSS region	transcription start site region 133805
Tssr133806	15	13173660 to 13173706	46	-	TSS region	transcription start site region 133806
D15Mit53	15	13280455 to 13280591	136		DNA segment	DNA segment, Chr 15, Massachusetts Institute of Technology 53
Gm46517	15	13287334 to 13306975	19641	+	lncRNA gene	predicted gene, 46517
Gm8238	15	13418422 to 13418856	434	-	pseudogene	predicted gene 8238
Cpgi6965	15	13418665 to 13418887	222		CpG island	CpG island 6965
Gm4940	15	13452316 to 13453109	793	+	pseudogene	predicted gene 4940
Tssr130756	15	13481325 to 13481328	3	+	TSS region	transcription start site region 130756
Gm49112	15	13481349 to 13481637	288	+	pseudogene	predicted gene, 49112