Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:12858607-13488644

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lfibq25 15 12672707 to 13093785 421078 QTL liver fibrosis QTL 25
Drosha 15 12824815 to 12935291 110476 + protein coding gene drosha, ribonuclease type III
Tssr130749 15 12918392 to 12918407 15 + TSS region transcription start site region 130749
Tssr130750 15 12924005 to 12924015 10 + TSS region transcription start site region 130750
Tssr130751 15 12924045 to 12924063 18 + TSS region transcription start site region 130751
Tssr130752 15 12924064 to 12924090 26 + TSS region transcription start site region 130752
Tssr130753 15 12924092 to 12924105 13 + TSS region transcription start site region 130753
Gm49100 15 12955722 to 12960267 4545 + pseudogene predicted gene, 49100
Tssr133800 15 12962271 to 12962283 12 - TSS region transcription start site region 133800
D15Mit265a 15 12978809 to 12979006 197 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 265a
D15Mit265b 15 12978809 to 12978923 114 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 265b
uwl 15 12979006 to 3460212 -9518794 heritable phenotypic marker underwhite-like
Gm24664 15 12980829 to 12980928 99 + rRNA gene predicted gene, 24664
Cdh6 15 13028701 to 13173675 144974 - protein coding gene cadherin 6
B130021B11Rik 15 13029646 to 13033813 4167 unclassified gene RIKEN cDNA B130021B11 gene
Gm35018 15 13092017 to 13094568 2551 + lncRNA gene predicted gene, 35018
Tssr133801 15 13132923 to 13132929 6 - TSS region transcription start site region 133801
Tssr133802 15 13148149 to 13148153 4 - TSS region transcription start site region 133802
Gm46513 15 13149264 to 13169977 20713 + lncRNA gene predicted gene, 46513
Tssr130754 15 13155227 to 13155238 11 + TSS region transcription start site region 130754
Tssr130755 15 13155242 to 13155247 5 + TSS region transcription start site region 130755
Cpgi6963 15 13172341 to 13172784 443 CpG island CpG island 6963
Cpgi6964 15 13173030 to 13173558 528 CpG island CpG island 6964
Tssr133803 15 13173586 to 13173602 16 - TSS region transcription start site region 133803
Tssr133804 15 13173607 to 13173644 37 - TSS region transcription start site region 133804
Tssr133805 15 13173650 to 13173658 8 - TSS region transcription start site region 133805
Tssr133806 15 13173660 to 13173706 46 - TSS region transcription start site region 133806
D15Mit53 15 13280455 to 13280591 136 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 53
Gm46517 15 13287334 to 13306975 19641 + lncRNA gene predicted gene, 46517
Gm8238 15 13418422 to 13418856 434 - pseudogene predicted gene 8238
Cpgi6965 15 13418665 to 13418887 222 CpG island CpG island 6965
Gm4940 15 13452316 to 13453109 793 + pseudogene predicted gene 4940
Tssr130756 15 13481325 to 13481328 3 + TSS region transcription start site region 130756
Gm49112 15 13481349 to 13481637 288 + pseudogene predicted gene, 49112