Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:12649914-12829942

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pdzd2 15 12359711 to 12739924 380213 - protein coding gene PDZ domain containing 2
Gm41273 15 12651354 to 12666136 14782 + lncRNA gene predicted gene, 41273
Lfibq25 15 12672707 to 13093785 421078 QTL liver fibrosis QTL 25
Tssr133788 15 12674170 to 12674186 16 - TSS region transcription start site region 133788
Tssr133789 15 12674206 to 12674217 11 - TSS region transcription start site region 133789
Tssr133790 15 12681726 to 12681729 3 - TSS region transcription start site region 133790
Gm24302 15 12695124 to 12695224 100 + miRNA gene predicted gene, 24302
Tssr133791 15 12737161 to 12737166 5 - TSS region transcription start site region 133791
Cpgi6960 15 12739158 to 12740328 1170 CpG island CpG island 6960
Tssr133792 15 12739870 to 12739906 36 - TSS region transcription start site region 133792
Tssr133793 15 12739914 to 12739942 28 - TSS region transcription start site region 133793
Tssr133794 15 12739948 to 12739961 13 - TSS region transcription start site region 133794
Gm49276 15 12757098 to 12757464 366 - pseudogene predicted gene, 49276
Gm17756 15 12765172 to 12765375 203 - pseudogene predicted gene, 17756
Gm41274 15 12798524 to 12800946 2422 + lncRNA gene predicted gene, 41274
Gm49277 15 12804782 to 12805173 391 - pseudogene predicted gene, 49277
6030458C11Rik 15 12808177 to 12824649 16472 - protein coding gene RIKEN cDNA 6030458C11 gene
Tssr133795 15 12813706 to 12813719 13 - TSS region transcription start site region 133795
Tssr133796 15 12823809 to 12823812 3 - TSS region transcription start site region 133796
Cpgi6961 15 12824218 to 12825356 1138 CpG island CpG island 6961
Tssr133797 15 12824584 to 12824604 20 - TSS region transcription start site region 133797
Tssr133798 15 12824605 to 12824654 49 - TSS region transcription start site region 133798
Tssr133799 15 12824664 to 12824675 11 - TSS region transcription start site region 133799
Drosha 15 12824815 to 12935291 110476 + protein coding gene drosha, ribonuclease type III
Tssr130744 15 12824822 to 12824833 11 + TSS region transcription start site region 130744
Tssr130745 15 12824841 to 12824883 42 + TSS region transcription start site region 130745
Tssr130746 15 12824884 to 12824907 23 + TSS region transcription start site region 130746
D15Mit199 15 12826616 to 12826740 124 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 199