Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:12349675-12679684

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Golph3 15 12321450 to 12351591 30141 + protein coding gene golgi phosphoprotein 3
Tssr130739 15 12349940 to 12349970 30 + TSS region transcription start site region 130739
Tssr130740 15 12350079 to 12350091 12 + TSS region transcription start site region 130740
Tssr130741 15 12350178 to 12350191 13 + TSS region transcription start site region 130741
Tssr130742 15 12350217 to 12350237 20 + TSS region transcription start site region 130742
Tssr130743 15 12350656 to 12350676 20 + TSS region transcription start site region 130743
D15Ertd136e 15 12355124 to 12355328 204 DNA segment DNA segment, Chr 15, ERATO Doi 136, expressed
Pdzd2 15 12359711 to 12739924 380213 - protein coding gene PDZ domain containing 2
Cpgi6958 15 12375088 to 12375578 490 CpG island CpG island 6958
Tssr133770 15 12397477 to 12397481 4 - TSS region transcription start site region 133770
D15Mit176 15 12402117 to 12402266 149 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 176
D15Mit177 15 12402143 to 12402259 116 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 177
Tssr133771 15 12419545 to 12419591 46 - TSS region transcription start site region 133771
Tssr133772 15 12419592 to 12419603 11 - TSS region transcription start site region 133772
Tssr133773 15 12419630 to 12419643 13 - TSS region transcription start site region 133773
Tssr133774 15 12424795 to 12424799 4 - TSS region transcription start site region 133774
Tssr133775 15 12491848 to 12491853 5 - TSS region transcription start site region 133775
Tssr133776 15 12493489 to 12493533 44 - TSS region transcription start site region 133776
Tssr133777 15 12514675 to 12514684 9 - TSS region transcription start site region 133777
5033430J17Rik 15 12535526 to 12536732 1206 unclassified non-coding RNA gene RIKEN cDNA 5033430J17 gene
Tssr133778 15 12548586 to 12548595 9 - TSS region transcription start site region 133778
Tssr133779 15 12549262 to 12549285 23 - TSS region transcription start site region 133779
Tssr133780 15 12549286 to 12549296 10 - TSS region transcription start site region 133780
Tssr133781 15 12549300 to 12549305 5 - TSS region transcription start site region 133781
Cpgi6959 15 12549315 to 12549777 462 CpG island CpG island 6959
Tssr133782 15 12549346 to 12549361 15 - TSS region transcription start site region 133782
Tssr133783 15 12549898 to 12549909 11 - TSS region transcription start site region 133783
Tssr133784 15 12550050 to 12550067 17 - TSS region transcription start site region 133784
Tssr133785 15 12550187 to 12550209 22 - TSS region transcription start site region 133785
Gm24135 15 12572430 to 12572530 100 - miRNA gene predicted gene, 24135
Gm2606 15 12574889 to 12575890 1001 + pseudogene predicted pseudogene 2606
Tssr4555 15 12599054 to 12599062 8 - TSS region transcription start site region 4555
Tssr133786 15 12622333 to 12622345 12 - TSS region transcription start site region 133786
Tssr133787 15 12622403 to 12622413 10 - TSS region transcription start site region 133787
F830212C03Rik 15 12633062 to 12635346 2284 - protein coding gene RIKEN cDNA F830212C03 gene
Gm41273 15 12651354 to 12666136 14782 + lncRNA gene predicted gene, 41273
Lfibq25 15 12672707 to 13093785 421078 QTL liver fibrosis QTL 25
Tssr133788 15 12674170 to 12674186 16 - TSS region transcription start site region 133788
Tssr133789 15 12674206 to 12674217 11 - TSS region transcription start site region 133789
Hyplip2 15 102988123 to 12402117 -90586006 QTL hyperlipidemia 2