Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:11968149-12180472

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700047G03Rik 15 11967062 to 11970083 3021 + lincRNA gene RIKEN cDNA 1700047G03 gene
Tssr130710 15 11971308 to 11971311 3 + TSS region transcription start site region 130710
Sub1 15 11981336 to 11996035 14699 - protein coding gene SUB1 homolog, transcriptional regulator
Tssr133757 15 11987691 to 11987695 4 - TSS region transcription start site region 133757
Tssr133758 15 11991016 to 11991050 34 - TSS region transcription start site region 133758
Cpgi6952 15 11995260 to 11996358 1098 CpG island CpG island 6952
Tssr133759 15 11995998 to 11996014 16 - TSS region transcription start site region 133759
Tssr133760 15 11996944 to 11996962 18 - TSS region transcription start site region 133760
Tssr133761 15 12010064 to 12010067 3 - TSS region transcription start site region 133761
Cpgi6953 15 12010503 to 12010894 391 CpG island CpG island 6953
Tssr133762 15 12010801 to 12010811 10 - TSS region transcription start site region 133762
Tssr133763 15 12010871 to 12010882 11 - TSS region transcription start site region 133763
Gm2559 15 12031565 to 12031927 362 - pseudogene predicted gene 2559
Tssr133764 15 12032589 to 12032633 44 - TSS region transcription start site region 133764
Gm34759 15 12068149 to 12080472 12323 - lincRNA gene predicted gene, 34759
Cpgi6954 15 12106189 to 12106472 283 CpG island CpG island 6954
Tssr133765 15 12106903 to 12106910 7 - TSS region transcription start site region 133765
Cpgi6955 15 12117238 to 12119113 1875 CpG island CpG island 6955
Tssr130711 15 12117584 to 12117612 28 + TSS region transcription start site region 130711
Zfr 15 12117720 to 12185449 67729 + protein coding gene zinc finger RNA binding protein
Tssr130712 15 12117782 to 12117795 13 + TSS region transcription start site region 130712
Tssr130713 15 12117813 to 12117846 33 + TSS region transcription start site region 130713
Tssr130714 15 12117848 to 12117905 57 + TSS region transcription start site region 130714
Tssr130715 15 12118032 to 12118074 42 + TSS region transcription start site region 130715
9330115C17Rik 15 12120032 to 12121428 1396 unclassified gene RIKEN cDNA 9330115C17 gene
Tssr130716 15 12122858 to 12122860 2 + TSS region transcription start site region 130716
Tssr130717 15 12129505 to 12129511 6 + TSS region transcription start site region 130717
Tssr130718 15 12136569 to 12136588 19 + TSS region transcription start site region 130718
Tssr133766 15 12136663 to 12136684 21 - TSS region transcription start site region 133766
Tssr133767 15 12137923 to 12137937 14 - TSS region transcription start site region 133767
Tssr130719 15 12146157 to 12146201 44 + TSS region transcription start site region 130719
Tssr130720 15 12146275 to 12146286 11 + TSS region transcription start site region 130720
Tssr130721 15 12149312 to 12149315 3 + TSS region transcription start site region 130721
Gm25713 15 12158333 to 12158441 108 - snRNA gene predicted gene, 25713
Mir1898 15 12171492 to 12171574 82 + miRNA gene microRNA 1898
Tssr130722 15 12179652 to 12179664 12 + TSS region transcription start site region 130722
Tssr130723 15 12179719 to 12179735 16 + TSS region transcription start site region 130723