Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:10964580-11834593

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34315 15 10949648 to 10981650 32002 - lncRNA gene predicted gene, 34315
C1qtnf3 15 10952332 to 10980150 27818 + protein coding gene C1q and tumor necrosis factor related protein 3
Cpgi6946 15 10981341 to 10982146 805 CpG island CpG island 6946
Tssr130700 15 10981747 to 10981765 18 + TSS region transcription start site region 130700
Amacr 15 10981756 to 10996624 14868 + protein coding gene alpha-methylacyl-CoA racemase
Tssr130701 15 10981780 to 10981805 25 + TSS region transcription start site region 130701
Tssr130702 15 10992369 to 10992370 1 + TSS region transcription start site region 130702
Tssr4552 15 10996428 to 10996431 3 + TSS region transcription start site region 4552
Tssr130703 15 11000716 to 11000736 20 + TSS region transcription start site region 130703
Slc45a2 15 11000721 to 11029233 28512 + protein coding gene solute carrier family 45, member 2
Tssr130704 15 11000748 to 11000763 15 + TSS region transcription start site region 130704
Cpgi6947 15 11027764 to 11028018 254 CpG island CpG island 6947
Rxfp3 15 11033717 to 11037968 4251 - protein coding gene relaxin family peptide receptor 3
Cpgi6948 15 11035853 to 11038036 2183 CpG island CpG island 6948
Tssr130705 15 11064764 to 11064797 33 + TSS region transcription start site region 130705
Adamts12 15 11064790 to 11346867 282077 + protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
Tssr130706 15 11064801 to 11064823 22 + TSS region transcription start site region 130706
Tssr130707 15 11064863 to 11064877 14 + TSS region transcription start site region 130707
Tssr130708 15 11076330 to 11076333 3 + TSS region transcription start site region 130708
Tssr4553 15 11334759 to 11334765 6 + TSS region transcription start site region 4553
Gm34444 15 11359975 to 11367060 7085 - lncRNA gene predicted gene, 34444
Gm24844 15 11361611 to 11361737 126 - snoRNA gene predicted gene, 24844
Tars 15 11383663 to 11399658 15995 - protein coding gene threonyl-tRNA synthetase
Cpgi6949 15 11399388 to 11399964 576 CpG island CpG island 6949
Tssr133747 15 11399552 to 11399559 7 - TSS region transcription start site region 133747
Tssr133748 15 11399580 to 11399593 13 - TSS region transcription start site region 133748
Tssr133749 15 11399594 to 11399674 80 - TSS region transcription start site region 133749
Tssr133750 15 11399676 to 11399683 7 - TSS region transcription start site region 133750
Gm49106 15 11625097 to 11630746 5649 - lincRNA gene predicted gene, 49106
Gm49107 15 11630729 to 11638325 7596 + lincRNA gene predicted gene, 49107
Gm41271 15 11696810 to 11703703 6893 - lncRNA gene predicted gene, 41271
Gm41272 15 11709377 to 11715373 5996 - lncRNA gene predicted gene, 41272
Tssr133751 15 11720558 to 11720564 6 - TSS region transcription start site region 133751
Gm34501 15 11725754 to 11729618 3864 - lncRNA gene predicted gene, 34501
Tssr4554 15 11762916 to 11762918 2 + TSS region transcription start site region 4554