Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:10729764-11399797

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930556M19Rik 15 10714836 to 10790123 75287 + lncRNA gene RIKEN cDNA 4930556M19 gene
Tssr133746 15 10771373 to 10771386 13 - TSS region transcription start site region 133746
D15Mit225 15 10799829 to 10799906 77 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 225
Gm19276 15 10829051 to 10832713 3662 + lincRNA gene predicted gene, 19276
Gm29742 15 10917437 to 10917821 384 + pseudogene predicted gene, 29742
Gm49068 15 10938122 to 10938544 422 + pseudogene predicted gene, 49068
Gm34315 15 10949648 to 10981650 32002 - lncRNA gene predicted gene, 34315
Tssr130698 15 10952203 to 10952214 11 + TSS region transcription start site region 130698
C1qtnf3 15 10952332 to 10980150 27818 + protein coding gene C1q and tumor necrosis factor related protein 3
Tssr130699 15 10952348 to 10952364 16 + TSS region transcription start site region 130699
Cpgi6945 15 10952383 to 10952605 222 CpG island CpG island 6945
Cpgi6946 15 10981341 to 10982146 805 CpG island CpG island 6946
Tssr130700 15 10981747 to 10981765 18 + TSS region transcription start site region 130700
Amacr 15 10981756 to 10996624 14868 + protein coding gene alpha-methylacyl-CoA racemase
Tssr130701 15 10981780 to 10981805 25 + TSS region transcription start site region 130701
Tssr130702 15 10992369 to 10992370 1 + TSS region transcription start site region 130702
Tssr4552 15 10996428 to 10996431 3 + TSS region transcription start site region 4552
Tssr130703 15 11000716 to 11000736 20 + TSS region transcription start site region 130703
Slc45a2 15 11000721 to 11029233 28512 + protein coding gene solute carrier family 45, member 2
Tssr130704 15 11000748 to 11000763 15 + TSS region transcription start site region 130704
Cpgi6947 15 11027764 to 11028018 254 CpG island CpG island 6947
Rxfp3 15 11033717 to 11037968 4251 - protein coding gene relaxin family peptide receptor 3
Cpgi6948 15 11035853 to 11038036 2183 CpG island CpG island 6948
Tssr130705 15 11064764 to 11064797 33 + TSS region transcription start site region 130705
Adamts12 15 11064790 to 11346867 282077 + protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
Tssr130706 15 11064801 to 11064823 22 + TSS region transcription start site region 130706
Tssr130707 15 11064863 to 11064877 14 + TSS region transcription start site region 130707
Tssr130708 15 11076330 to 11076333 3 + TSS region transcription start site region 130708
Tssr4553 15 11334759 to 11334765 6 + TSS region transcription start site region 4553
Gm34444 15 11359975 to 11367060 7085 - lncRNA gene predicted gene, 34444
Gm24844 15 11361611 to 11361737 126 - snoRNA gene predicted gene, 24844
Tars 15 11383663 to 11399658 15995 - protein coding gene threonyl-tRNA synthetase
Cpgi6949 15 11399388 to 11399964 576 CpG island CpG island 6949
Tssr133747 15 11399552 to 11399559 7 - TSS region transcription start site region 133747
Tssr133748 15 11399580 to 11399593 13 - TSS region transcription start site region 133748
Tssr133749 15 11399594 to 11399674 80 - TSS region transcription start site region 133749
Tssr133750 15 11399676 to 11399683 7 - TSS region transcription start site region 133750