Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:103230102-103450125

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111 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cbx5 15 103191544 to 103239816 48272 - protein coding gene chromobox 5
A630065K11Rik 15 103231957 to 103234051 2094 unclassified gene RIKEN cDNA A630065K11 gene
Cpgi7881 15 103239221 to 103240971 1750 CpG island CpG island 7881
Tssr136733 15 103239797 to 103239806 9 - TSS region transcription start site region 136733
Tssr136734 15 103239812 to 103239888 76 - TSS region transcription start site region 136734
Tssr133517 15 103239947 to 103239993 46 + TSS region transcription start site region 133517
Tssr133518 15 103240021 to 103240070 49 + TSS region transcription start site region 133518
Tssr133519 15 103240405 to 103240429 24 + TSS region transcription start site region 133519
Hnrnpa1 15 103240432 to 103246692 6260 + protein coding gene heterogeneous nuclear ribonucleoprotein A1
Tssr133520 15 103240442 to 103240453 11 + TSS region transcription start site region 133520
Tssr136735 15 103240748 to 103240758 10 - TSS region transcription start site region 136735
Tssr133521 15 103244003 to 103244019 16 + TSS region transcription start site region 133521
Tssr4744 15 103245586 to 103245593 7 + TSS region transcription start site region 4744
Nfe2 15 103248212 to 103258403 10191 - protein coding gene nuclear factor, erythroid derived 2
Tssr136736 15 103249321 to 103249343 22 - TSS region transcription start site region 136736
Tssr136737 15 103251055 to 103251071 16 - TSS region transcription start site region 136737
Tssr136738 15 103251647 to 103251654 7 - TSS region transcription start site region 136738
Tssr136739 15 103251657 to 103251705 48 - TSS region transcription start site region 136739
Tssr136740 15 103252768 to 103252784 16 - TSS region transcription start site region 136740
Tssr136741 15 103252814 to 103252829 15 - TSS region transcription start site region 136741
Tssr133522 15 103253016 to 103253025 9 + TSS region transcription start site region 133522
Tssr136742 15 103253497 to 103253501 4 - TSS region transcription start site region 136742
Cpgi7882 15 103255051 to 103255498 447 CpG island CpG island 7882
Tssr136743 15 103255229 to 103255250 21 - TSS region transcription start site region 136743
Tssr136744 15 103255259 to 103255279 20 - TSS region transcription start site region 136744
Tssr136745 15 103255371 to 103255386 15 - TSS region transcription start site region 136745
Tssr136746 15 103255390 to 103255397 7 - TSS region transcription start site region 136746
Tssr136747 15 103255427 to 103255432 5 - TSS region transcription start site region 136747
Tssr136748 15 103255433 to 103255445 12 - TSS region transcription start site region 136748
Tssr136749 15 103260140 to 103260187 47 - TSS region transcription start site region 136749
Cpgi7883 15 103272560 to 103273149 589 CpG island CpG island 7883
Copz1 15 103272834 to 103299869 27035 + protein coding gene coatomer protein complex, subunit zeta 1
Tssr133523 15 103272888 to 103272892 4 + TSS region transcription start site region 133523
Tssr133524 15 103272893 to 103272907 14 + TSS region transcription start site region 133524
Tssr133525 15 103273805 to 103273808 3 + TSS region transcription start site region 133525
Tssr133526 15 103282047 to 103282051 4 + TSS region transcription start site region 133526
Mir148b 15 103285125 to 103285221 96 + miRNA gene microRNA 148b
Gm41406 15 103285701 to 103290490 4789 - lncRNA gene predicted gene, 41406
Tssr133527 15 103293404 to 103293406 2 + TSS region transcription start site region 133527
Tssr133528 15 103296725 to 103296759 34 + TSS region transcription start site region 133528
Tssr133529 15 103297880 to 103297900 20 + TSS region transcription start site region 133529
Tssr133530 15 103298663 to 103298669 6 + TSS region transcription start site region 133530
Tssr133531 15 103298785 to 103298808 23 + TSS region transcription start site region 133531
Tssr133532 15 103298869 to 103298888 19 + TSS region transcription start site region 133532
Tssr133533 15 103298930 to 103298972 42 + TSS region transcription start site region 133533
Tssr133534 15 103299354 to 103299388 34 + TSS region transcription start site region 133534
Cpgi7884 15 103300152 to 103300373 221 CpG island CpG island 7884
Gm49482 15 103301065 to 103309077 8012 + antisense lncRNA gene predicted gene, 49482
Cpgi7885 15 103304713 to 103305734 1021 CpG island CpG island 7885
Tssr133535 15 103305443 to 103305449 6 + TSS region transcription start site region 133535
Gpr84 15 103308235 to 103310612 2377 - protein coding gene G protein-coupled receptor 84
Tssr133536 15 103308367 to 103308406 39 + TSS region transcription start site region 133536
Cpgi7886 15 103308443 to 103309509 1066 CpG island CpG island 7886
Tssr136750 15 103310402 to 103310413 11 - TSS region transcription start site region 136750
Tssr136751 15 103310425 to 103310444 19 - TSS region transcription start site region 136751
Tssr136752 15 103310448 to 103310476 28 - TSS region transcription start site region 136752
Zfp385a 15 103313895 to 103340086 26191 - protein coding gene zinc finger protein 385A
Cpgi7887 15 103313996 to 103314547 551 CpG island CpG island 7887
Tssr136753 15 103314741 to 103314754 13 - TSS region transcription start site region 136753
Tssr136754 15 103314876 to 103314899 23 - TSS region transcription start site region 136754
Tssr136755 15 103314957 to 103314983 26 - TSS region transcription start site region 136755
Cpgi7888 15 103314971 to 103315236 265 CpG island CpG island 7888
Tssr136756 15 103314996 to 103315023 27 - TSS region transcription start site region 136756
Tssr136757 15 103315072 to 103315084 12 - TSS region transcription start site region 136757
Tssr136758 15 103315997 to 103316017 20 - TSS region transcription start site region 136758
Tssr136759 15 103316535 to 103316540 5 - TSS region transcription start site region 136759
Tssr136760 15 103318262 to 103318274 12 - TSS region transcription start site region 136760
Tssr136761 15 103319606 to 103319612 6 - TSS region transcription start site region 136761
Tssr136762 15 103319723 to 103319726 3 - TSS region transcription start site region 136762
Cpgi7889 15 103322890 to 103323833 943 CpG island CpG island 7889
Tssr136763 15 103323217 to 103323267 50 - TSS region transcription start site region 136763
Tssr136764 15 103323429 to 103323446 17 - TSS region transcription start site region 136764
Tssr136765 15 103323495 to 103323566 71 - TSS region transcription start site region 136765
Tssr136766 15 103333355 to 103333390 35 - TSS region transcription start site region 136766
Tssr136767 15 103333810 to 103333836 26 - TSS region transcription start site region 136767
Tssr136768 15 103334271 to 103334347 76 - TSS region transcription start site region 136768
Tssr133537 15 103335779 to 103335781 2 + TSS region transcription start site region 133537
Cpgi7890 15 103339795 to 103340187 392 CpG island CpG island 7890
Tssr136769 15 103340085 to 103340100 15 - TSS region transcription start site region 136769
Tssr136770 15 103340102 to 103340125 23 - TSS region transcription start site region 136770
Tssr136771 15 103340130 to 103340141 11 - TSS region transcription start site region 136771
Itga5 15 103344286 to 103366763 22477 - protein coding gene integrin alpha 5 (fibronectin receptor alpha)
Tssr136772 15 103344558 to 103344574 16 - TSS region transcription start site region 136772
Tssr136773 15 103344638 to 103344656 18 - TSS region transcription start site region 136773
Tssr136774 15 103344712 to 103344724 12 - TSS region transcription start site region 136774
Tssr136775 15 103344730 to 103344767 37 - TSS region transcription start site region 136775
Tssr136776 15 103344774 to 103344789 15 - TSS region transcription start site region 136776
Tssr136777 15 103344806 to 103344833 27 - TSS region transcription start site region 136777
Tssr136778 15 103347255 to 103347263 8 - TSS region transcription start site region 136778
Mir6963 15 103350455 to 103350525 70 - miRNA gene microRNA 6963
Tssr136779 15 103353757 to 103353784 27 - TSS region transcription start site region 136779
Cpgi7891 15 103365554 to 103366837 1283 CpG island CpG island 7891
Tssr136780 15 103366527 to 103366579 52 - TSS region transcription start site region 136780
Tssr136781 15 103366588 to 103366600 12 - TSS region transcription start site region 136781
Tssr136782 15 103366770 to 103366798 28 - TSS region transcription start site region 136782
Tssr136783 15 103376807 to 103376840 33 - TSS region transcription start site region 136783
Gm37322 15 103378071 to 103378407 336 + unclassified gene predicted gene, 37322
Tssr136784 15 103393659 to 103393671 12 - TSS region transcription start site region 136784
Gtsf1 15 103402458 to 103430446 27988 - protein coding gene gametocyte specific factor 1
Tssr136785 15 103420549 to 103420558 9 - TSS region transcription start site region 136785
Tssr136786 15 103429538 to 103429542 4 - TSS region transcription start site region 136786
Tssr136787 15 103429547 to 103429565 18 - TSS region transcription start site region 136787
Cpgi7892 15 103430200 to 103430558 358 CpG island CpG island 7892
Tssr136788 15 103430359 to 103430373 14 - TSS region transcription start site region 136788
Tssr136789 15 103430384 to 103430385 1 - TSS region transcription start site region 136789
Tssr136790 15 103430388 to 103430431 43 - TSS region transcription start site region 136790
Gtsf2 15 103438957 to 103448469 9512 - protein coding gene gametocyte specific factor 2
Gm9106 15 103445380 to 103446699 1319 - pseudogene predicted gene 9106
Tssr136791 15 103446648 to 103446668 20 - TSS region transcription start site region 136791
Tssr136792 15 103448455 to 103448464 9 - TSS region transcription start site region 136792
Tssr136793 15 103448473 to 103448492 19 - TSS region transcription start site region 136793