Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:103183038-103823045

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190 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7880 15 103183026 to 103184230 1204 CpG island CpG island 7880
Cbx5 15 103191544 to 103239816 48272 - protein coding gene chromobox 5
Tssr136726 15 103193380 to 103193384 4 - TSS region transcription start site region 136726
Tssr136727 15 103196805 to 103196824 19 - TSS region transcription start site region 136727
Tssr136728 15 103199622 to 103199637 15 - TSS region transcription start site region 136728
Tssr136729 15 103213236 to 103213252 16 - TSS region transcription start site region 136729
Tssr136730 15 103215118 to 103215136 18 - TSS region transcription start site region 136730
Tssr136731 15 103215285 to 103215361 76 - TSS region transcription start site region 136731
Tssr136732 15 103216261 to 103216285 24 - TSS region transcription start site region 136732
A630065K11Rik 15 103231957 to 103234051 2094 unclassified gene RIKEN cDNA A630065K11 gene
Cpgi7881 15 103239221 to 103240971 1750 CpG island CpG island 7881
Tssr136733 15 103239797 to 103239806 9 - TSS region transcription start site region 136733
Tssr136734 15 103239812 to 103239888 76 - TSS region transcription start site region 136734
Tssr133517 15 103239947 to 103239993 46 + TSS region transcription start site region 133517
Tssr133518 15 103240021 to 103240070 49 + TSS region transcription start site region 133518
Tssr133519 15 103240405 to 103240429 24 + TSS region transcription start site region 133519
Hnrnpa1 15 103240432 to 103246692 6260 + protein coding gene heterogeneous nuclear ribonucleoprotein A1
Tssr133520 15 103240442 to 103240453 11 + TSS region transcription start site region 133520
Tssr136735 15 103240748 to 103240758 10 - TSS region transcription start site region 136735
Tssr133521 15 103244003 to 103244019 16 + TSS region transcription start site region 133521
Tssr4744 15 103245586 to 103245593 7 + TSS region transcription start site region 4744
Nfe2 15 103248212 to 103258403 10191 - protein coding gene nuclear factor, erythroid derived 2
Tssr136736 15 103249321 to 103249343 22 - TSS region transcription start site region 136736
Tssr136737 15 103251055 to 103251071 16 - TSS region transcription start site region 136737
Tssr136738 15 103251647 to 103251654 7 - TSS region transcription start site region 136738
Tssr136739 15 103251657 to 103251705 48 - TSS region transcription start site region 136739
Tssr136740 15 103252768 to 103252784 16 - TSS region transcription start site region 136740
Tssr136741 15 103252814 to 103252829 15 - TSS region transcription start site region 136741
Tssr133522 15 103253016 to 103253025 9 + TSS region transcription start site region 133522
Tssr136742 15 103253497 to 103253501 4 - TSS region transcription start site region 136742
Cpgi7882 15 103255051 to 103255498 447 CpG island CpG island 7882
Tssr136743 15 103255229 to 103255250 21 - TSS region transcription start site region 136743
Tssr136744 15 103255259 to 103255279 20 - TSS region transcription start site region 136744
Tssr136745 15 103255371 to 103255386 15 - TSS region transcription start site region 136745
Tssr136746 15 103255390 to 103255397 7 - TSS region transcription start site region 136746
Tssr136747 15 103255427 to 103255432 5 - TSS region transcription start site region 136747
Tssr136748 15 103255433 to 103255445 12 - TSS region transcription start site region 136748
Tssr136749 15 103260140 to 103260187 47 - TSS region transcription start site region 136749
Cpgi7883 15 103272560 to 103273149 589 CpG island CpG island 7883
Copz1 15 103272834 to 103299869 27035 + protein coding gene coatomer protein complex, subunit zeta 1
Tssr133523 15 103272888 to 103272892 4 + TSS region transcription start site region 133523
Tssr133524 15 103272893 to 103272907 14 + TSS region transcription start site region 133524
Tssr133525 15 103273805 to 103273808 3 + TSS region transcription start site region 133525
Tssr133526 15 103282047 to 103282051 4 + TSS region transcription start site region 133526
Mir148b 15 103285125 to 103285221 96 + miRNA gene microRNA 148b
Gm41406 15 103285701 to 103290490 4789 - lncRNA gene predicted gene, 41406
Tssr133527 15 103293404 to 103293406 2 + TSS region transcription start site region 133527
Tssr133528 15 103296725 to 103296759 34 + TSS region transcription start site region 133528
Tssr133529 15 103297880 to 103297900 20 + TSS region transcription start site region 133529
Tssr133530 15 103298663 to 103298669 6 + TSS region transcription start site region 133530
Tssr133531 15 103298785 to 103298808 23 + TSS region transcription start site region 133531
Tssr133532 15 103298869 to 103298888 19 + TSS region transcription start site region 133532
Tssr133533 15 103298930 to 103298972 42 + TSS region transcription start site region 133533
Tssr133534 15 103299354 to 103299388 34 + TSS region transcription start site region 133534
Cpgi7884 15 103300152 to 103300373 221 CpG island CpG island 7884
Gm49482 15 103301065 to 103309077 8012 + antisense lncRNA gene predicted gene, 49482
Cpgi7885 15 103304713 to 103305734 1021 CpG island CpG island 7885
Tssr133535 15 103305443 to 103305449 6 + TSS region transcription start site region 133535
Gpr84 15 103308235 to 103310612 2377 - protein coding gene G protein-coupled receptor 84
Tssr133536 15 103308367 to 103308406 39 + TSS region transcription start site region 133536
Cpgi7886 15 103308443 to 103309509 1066 CpG island CpG island 7886
Tssr136750 15 103310402 to 103310413 11 - TSS region transcription start site region 136750
Tssr136751 15 103310425 to 103310444 19 - TSS region transcription start site region 136751
Tssr136752 15 103310448 to 103310476 28 - TSS region transcription start site region 136752
Zfp385a 15 103313895 to 103340086 26191 - protein coding gene zinc finger protein 385A
Cpgi7887 15 103313996 to 103314547 551 CpG island CpG island 7887
Tssr136753 15 103314741 to 103314754 13 - TSS region transcription start site region 136753
Tssr136754 15 103314876 to 103314899 23 - TSS region transcription start site region 136754
Tssr136755 15 103314957 to 103314983 26 - TSS region transcription start site region 136755
Cpgi7888 15 103314971 to 103315236 265 CpG island CpG island 7888
Tssr136756 15 103314996 to 103315023 27 - TSS region transcription start site region 136756
Tssr136757 15 103315072 to 103315084 12 - TSS region transcription start site region 136757
Tssr136758 15 103315997 to 103316017 20 - TSS region transcription start site region 136758
Tssr136759 15 103316535 to 103316540 5 - TSS region transcription start site region 136759
Tssr136760 15 103318262 to 103318274 12 - TSS region transcription start site region 136760
Tssr136761 15 103319606 to 103319612 6 - TSS region transcription start site region 136761
Tssr136762 15 103319723 to 103319726 3 - TSS region transcription start site region 136762
Cpgi7889 15 103322890 to 103323833 943 CpG island CpG island 7889
Tssr136763 15 103323217 to 103323267 50 - TSS region transcription start site region 136763
Tssr136764 15 103323429 to 103323446 17 - TSS region transcription start site region 136764
Tssr136765 15 103323495 to 103323566 71 - TSS region transcription start site region 136765
Tssr136766 15 103333355 to 103333390 35 - TSS region transcription start site region 136766
Tssr136767 15 103333810 to 103333836 26 - TSS region transcription start site region 136767
Tssr136768 15 103334271 to 103334347 76 - TSS region transcription start site region 136768
Tssr133537 15 103335779 to 103335781 2 + TSS region transcription start site region 133537
Cpgi7890 15 103339795 to 103340187 392 CpG island CpG island 7890
Tssr136769 15 103340085 to 103340100 15 - TSS region transcription start site region 136769
Tssr136770 15 103340102 to 103340125 23 - TSS region transcription start site region 136770
Tssr136771 15 103340130 to 103340141 11 - TSS region transcription start site region 136771
Itga5 15 103344286 to 103366763 22477 - protein coding gene integrin alpha 5 (fibronectin receptor alpha)
Tssr136772 15 103344558 to 103344574 16 - TSS region transcription start site region 136772
Tssr136773 15 103344638 to 103344656 18 - TSS region transcription start site region 136773
Tssr136774 15 103344712 to 103344724 12 - TSS region transcription start site region 136774
Tssr136775 15 103344730 to 103344767 37 - TSS region transcription start site region 136775
Tssr136776 15 103344774 to 103344789 15 - TSS region transcription start site region 136776
Tssr136777 15 103344806 to 103344833 27 - TSS region transcription start site region 136777
Tssr136778 15 103347255 to 103347263 8 - TSS region transcription start site region 136778
Mir6963 15 103350455 to 103350525 70 - miRNA gene microRNA 6963
Tssr136779 15 103353757 to 103353784 27 - TSS region transcription start site region 136779
Cpgi7891 15 103365554 to 103366837 1283 CpG island CpG island 7891
Tssr136780 15 103366527 to 103366579 52 - TSS region transcription start site region 136780
Tssr136781 15 103366588 to 103366600 12 - TSS region transcription start site region 136781
Tssr136782 15 103366770 to 103366798 28 - TSS region transcription start site region 136782
Tssr136783 15 103376807 to 103376840 33 - TSS region transcription start site region 136783
Gm37322 15 103378071 to 103378407 336 + unclassified gene predicted gene, 37322
Tssr136784 15 103393659 to 103393671 12 - TSS region transcription start site region 136784
Gtsf1 15 103402458 to 103430446 27988 - protein coding gene gametocyte specific factor 1
Tssr136785 15 103420549 to 103420558 9 - TSS region transcription start site region 136785
Tssr136786 15 103429538 to 103429542 4 - TSS region transcription start site region 136786
Tssr136787 15 103429547 to 103429565 18 - TSS region transcription start site region 136787
Cpgi7892 15 103430200 to 103430558 358 CpG island CpG island 7892
Tssr136788 15 103430359 to 103430373 14 - TSS region transcription start site region 136788
Tssr136789 15 103430384 to 103430385 1 - TSS region transcription start site region 136789
Tssr136790 15 103430388 to 103430431 43 - TSS region transcription start site region 136790
Gtsf2 15 103438957 to 103448469 9512 - protein coding gene gametocyte specific factor 2
Gm9106 15 103445380 to 103446699 1319 - pseudogene predicted gene 9106
Tssr136791 15 103446648 to 103446668 20 - TSS region transcription start site region 136791
Tssr136792 15 103448455 to 103448464 9 - TSS region transcription start site region 136792
Tssr136793 15 103448473 to 103448492 19 - TSS region transcription start site region 136793
Tssr133538 15 103453782 to 103453860 78 + TSS region transcription start site region 133538
Nckap1l 15 103453794 to 103498810 45016 + protein coding gene NCK associated protein 1 like
Tssr133539 15 103453905 to 103453915 10 + TSS region transcription start site region 133539
Tssr133540 15 103462733 to 103462791 58 + TSS region transcription start site region 133540
Tssr133541 15 103464573 to 103464587 14 + TSS region transcription start site region 133541
Tssr133542 15 103470702 to 103470713 11 + TSS region transcription start site region 133542
D15Mit79 15 103472156 to 103472268 112 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 79
Tssr133543 15 103473534 to 103473548 14 + TSS region transcription start site region 133543
Tssr133544 15 103479117 to 103479125 8 + TSS region transcription start site region 133544
Tssr133545 15 103479129 to 103479144 15 + TSS region transcription start site region 133545
Tssr133546 15 103479180 to 103479185 5 + TSS region transcription start site region 133546
Cpgi7893 15 103502519 to 103504032 1513 CpG island CpG island 7893
Tssr133547 15 103502951 to 103503030 79 + TSS region transcription start site region 133547
Pde1b 15 103503034 to 103530052 27018 + protein coding gene phosphodiesterase 1B, Ca2+-calmodulin dependent
Tssr133548 15 103503038 to 103503045 7 + TSS region transcription start site region 133548
Tssr133549 15 103503067 to 103503088 21 + TSS region transcription start site region 133549
Tssr133550 15 103503163 to 103503217 54 + TSS region transcription start site region 133550
Tssr4745 15 103503219 to 103503241 22 + TSS region transcription start site region 4745
Tssr133551 15 103503250 to 103503259 9 + TSS region transcription start site region 133551
Tssr133552 15 103503261 to 103503288 27 + TSS region transcription start site region 133552
Tssr133553 15 103514331 to 103514352 21 + TSS region transcription start site region 133553
Tssr133554 15 103515108 to 103515133 25 + TSS region transcription start site region 133554
Tssr133555 15 103515244 to 103515254 10 + TSS region transcription start site region 133555
D15Mit35 15 103517333 to 103517472 139 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 35
Eae32 15 103517472 to 32578270 -70939202 QTL experimental allergic encephalomyelitis susceptibility 32
Dshv1 15 103517472 to 92890759 -10626713 QTL dorsal hippocampal volume 1
Cal7 15 103517472 to 99121283 -4396189 heritable phenotypic marker caracul-like 7
Bmd4 15 103517472 to 56323312 -47194160 QTL bone mineral density 4
Bhr2 15 103517472 to 64434485 -39082987 QTL bronchial hyperresponsiveness 2
Ppp1r1a 15 103530279 to 103538003 7724 - protein coding gene protein phosphatase 1, regulatory inhibitor subunit 1A
Tssr136794 15 103534392 to 103534404 12 - TSS region transcription start site region 136794
Cpgi7894 15 103537007 to 103538157 1150 CpG island CpG island 7894
Tssr136795 15 103537928 to 103538019 91 - TSS region transcription start site region 136795
Tssr136796 15 103538021 to 103538032 11 - TSS region transcription start site region 136796
Tssr133556 15 103538066 to 103538088 22 + TSS region transcription start site region 133556
Tssr133557 15 103538098 to 103538111 13 + TSS region transcription start site region 133557
Tssr136797 15 103538310 to 103538341 31 - TSS region transcription start site region 136797
Glycam1 15 103562759 to 103565081 2322 - protein coding gene glycosylation dependent cell adhesion molecule 1
Tssr136798 15 103562796 to 103562809 13 - TSS region transcription start site region 136798
Tssr136799 15 103562825 to 103562833 8 - TSS region transcription start site region 136799
Tssr133558 15 103562827 to 103562865 38 + TSS region transcription start site region 133558
Tssr136800 15 103562836 to 103562846 10 - TSS region transcription start site region 136800
Tssr136801 15 103562866 to 103562876 10 - TSS region transcription start site region 136801
Tssr136802 15 103562921 to 103562929 8 - TSS region transcription start site region 136802
Tssr136803 15 103562930 to 103562941 11 - TSS region transcription start site region 136803
Tssr136804 15 103562951 to 103562960 9 - TSS region transcription start site region 136804
Tssr133559 15 103562962 to 103562971 9 + TSS region transcription start site region 133559
Tssr136805 15 103562994 to 103563004 10 - TSS region transcription start site region 136805
Tssr136806 15 103563272 to 103563275 3 - TSS region transcription start site region 136806
Tssr136807 15 103563281 to 103563292 11 - TSS region transcription start site region 136807
Tssr136808 15 103563294 to 103563298 4 - TSS region transcription start site region 136808
Tssr136809 15 103563305 to 103563309 4 - TSS region transcription start site region 136809
Tssr136810 15 103563333 to 103563344 11 - TSS region transcription start site region 136810
Tssr136811 15 103563381 to 103563393 12 - TSS region transcription start site region 136811
Tssr133560 15 103563399 to 103563420 21 + TSS region transcription start site region 133560
Tssr136812 15 103563408 to 103563429 21 - TSS region transcription start site region 136812
Tssr136813 15 103563431 to 103563463 32 - TSS region transcription start site region 136813
Tssr136814 15 103564222 to 103564252 30 - TSS region transcription start site region 136814
Tssr136815 15 103565069 to 103565088 19 - TSS region transcription start site region 136815
Gm9108 15 103586944 to 103588368 1424 - pseudogene predicted gene 9108
Tssr136816 15 103588393 to 103588401 8 - TSS region transcription start site region 136816
Gm46539 15 103609534 to 103631409 21875 + lncRNA gene predicted gene, 46539
Gm49272 15 103649792 to 103655698 5906 + lincRNA gene predicted gene, 49272
Gm49273 15 103657839 to 103661681 3842 + pseudogene predicted gene, 49273
Gm49274 15 103661105 to 103661512 407 - pseudogene predicted gene, 49274
Gm49275 15 103661886 to 103661982 96 - pseudogene predicted gene, 49275
Chab4 15 103751919 to 103755469 3550 QTL cholesterol absorption 4
Mucl1 15 103751919 to 103755469 3550 - protein coding gene mucin-like 1
Tssr4746 15 103751943 to 103751957 14 - TSS region transcription start site region 4746
Tssr4747 15 103755505 to 103755510 5 - TSS region transcription start site region 4747
Gm49491 15 103804646 to 103804910 264 - pseudogene predicted gene, 49491