Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:103035814-103235827

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hoxc4 15 103018934 to 103036852 17918 + protein coding gene homeobox C4
Gm30528 15 103026807 to 103063780 36973 - lncRNA gene predicted gene, 30528
Cpgi7867 15 103035556 to 103035988 432 CpG island CpG island 7867
Cpgi7868 15 103041022 to 103041376 354 CpG island CpG island 7868
5730585A16Rik 15 103058280 to 103059306 1026 - protein coding gene RIKEN cDNA 5730585A16 gene
Cpgi7869 15 103060565 to 103061061 496 CpG island CpG island 7869
Cpgi7870 15 103061542 to 103061785 243 CpG island CpG island 7870
Cpgi7871 15 103069170 to 103069526 356 CpG island CpG island 7871
Cpgi7872 15 103085807 to 103086751 944 CpG island CpG island 7872
Gm28876 15 103096151 to 103102111 5960 - lincRNA gene predicted gene 28876
Tssr136721 15 103097784 to 103097787 3 - TSS region transcription start site region 136721
Tssr136722 15 103101964 to 103101970 6 - TSS region transcription start site region 136722
Tssr136723 15 103102101 to 103102117 16 - TSS region transcription start site region 136723
Tssr133513 15 103102215 to 103102228 13 + TSS region transcription start site region 133513
Gm10830 15 103102237 to 103105069 2832 + lincRNA gene predicted gene 10830
Gm28265 15 103102284 to 103104602 2318 - lincRNA gene predicted gene 28265
Cpgi7873 15 103102394 to 103102631 237 CpG island CpG island 7873
D930007P13Rik 15 103123070 to 103146828 23758 - lincRNA gene Riken cDNA D930007P13 gene
Tssr133514 15 103135797 to 103135808 11 + TSS region transcription start site region 133514
Tssr133515 15 103135814 to 103135827 13 + TSS region transcription start site region 133515
Tssr133516 15 103135830 to 103135845 15 + TSS region transcription start site region 133516
Gm49477 15 103135881 to 103140669 4788 + lincRNA gene predicted gene, 49477
Cpgi7874 15 103146365 to 103147474 1109 CpG island CpG island 7874
Smug1 15 103153290 to 103167092 13802 - protein coding gene single-strand selective monofunctional uracil DNA glycosylase
Cpgi7875 15 103155809 to 103156091 282 CpG island CpG island 7875
D15Mit160 15 103162729 to 103162875 146 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 160
Cpgi7876 15 103163233 to 103163417 184 CpG island CpG island 7876
Tssr136724 15 103163294 to 103163336 42 - TSS region transcription start site region 136724
Tssr136725 15 103168029 to 103168046 17 - TSS region transcription start site region 136725
Cpgi7877 15 103168631 to 103169584 953 CpG island CpG island 7877
Cpgi7878 15 103170008 to 103170515 507 CpG island CpG island 7878
Cpgi7879 15 103182098 to 103182876 778 CpG island CpG island 7879
Cpgi7880 15 103183026 to 103184230 1204 CpG island CpG island 7880
Cbx5 15 103191544 to 103239816 48272 - protein coding gene chromobox 5
Tssr136726 15 103193380 to 103193384 4 - TSS region transcription start site region 136726
Tssr136727 15 103196805 to 103196824 19 - TSS region transcription start site region 136727
Tssr136728 15 103199622 to 103199637 15 - TSS region transcription start site region 136728
Tssr136729 15 103213236 to 103213252 16 - TSS region transcription start site region 136729
Tssr136730 15 103215118 to 103215136 18 - TSS region transcription start site region 136730
Tssr136731 15 103215285 to 103215361 76 - TSS region transcription start site region 136731
Tssr136732 15 103216261 to 103216285 24 - TSS region transcription start site region 136732
A630065K11Rik 15 103231957 to 103234051 2094 unclassified gene RIKEN cDNA A630065K11 gene