Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:103008280-103109306

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hoxc6 15 102998257 to 103011881 13624 + protein coding gene homeobox C6
Tssr133502 15 103009481 to 103009507 26 + TSS region transcription start site region 133502
Tssr133503 15 103009517 to 103009544 27 + TSS region transcription start site region 133503
Tssr133504 15 103009545 to 103009558 13 + TSS region transcription start site region 133504
Cpgi7861 15 103009655 to 103009854 199 CpG island CpG island 7861
Tssr133505 15 103010127 to 103010140 13 + TSS region transcription start site region 133505
Cpgi7862 15 103010615 to 103010897 282 CpG island CpG island 7862
Tssr133506 15 103014000 to 103014014 14 + TSS region transcription start site region 133506
Hoxc5 15 103014008 to 103017429 3421 + protein coding gene homeobox C5
Tssr133507 15 103014129 to 103014145 16 + TSS region transcription start site region 133507
Cpgi7863 15 103014156 to 103014589 433 CpG island CpG island 7863
Tssr4743 15 103014337 to 103014368 31 + TSS region transcription start site region 4743
Tssr133508 15 103014370 to 103014389 19 + TSS region transcription start site region 133508
Cpgi7864 15 103014852 to 103015336 484 CpG island CpG island 7864
Mir615 15 103014910 to 103015001 91 + miRNA gene microRNA 615
Hoxc4 15 103018934 to 103036852 17918 + protein coding gene homeobox C4
Tssr133509 15 103018964 to 103018973 9 + TSS region transcription start site region 133509
Gm30528 15 103026807 to 103063780 36973 - lncRNA gene predicted gene, 30528
Cpgi7865 15 103027474 to 103027814 340 CpG island CpG island 7865
Cpgi7866 15 103034600 to 103035109 509 CpG island CpG island 7866
Tssr133510 15 103034617 to 103034642 25 + TSS region transcription start site region 133510
Tssr133511 15 103034657 to 103034676 19 + TSS region transcription start site region 133511
Tssr133512 15 103034700 to 103034720 20 + TSS region transcription start site region 133512
Cpgi7867 15 103035556 to 103035988 432 CpG island CpG island 7867
Cpgi7868 15 103041022 to 103041376 354 CpG island CpG island 7868
5730585A16Rik 15 103058280 to 103059306 1026 - protein coding gene RIKEN cDNA 5730585A16 gene
Cpgi7869 15 103060565 to 103061061 496 CpG island CpG island 7869
Cpgi7870 15 103061542 to 103061785 243 CpG island CpG island 7870
Cpgi7871 15 103069170 to 103069526 356 CpG island CpG island 7871
Cpgi7872 15 103085807 to 103086751 944 CpG island CpG island 7872
Gm28876 15 103096151 to 103102111 5960 - lincRNA gene predicted gene 28876
Tssr136721 15 103097784 to 103097787 3 - TSS region transcription start site region 136721
Tssr136722 15 103101964 to 103101970 6 - TSS region transcription start site region 136722
Tssr136723 15 103102101 to 103102117 16 - TSS region transcription start site region 136723
Tssr133513 15 103102215 to 103102228 13 + TSS region transcription start site region 133513
Gm10830 15 103102237 to 103105069 2832 + lincRNA gene predicted gene 10830
Gm28265 15 103102284 to 103104602 2318 - lincRNA gene predicted gene 28265
Cpgi7873 15 103102394 to 103102631 237 CpG island CpG island 7873