Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:102971255-102983186

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hoxc10	15	102966796 to 102971893	5097	+	protein coding gene	homeobox C10
Tssr133481	15	102971436 to 102971474	38	+	TSS region	transcription start site region 133481
Tssr133482	15	102972229 to 102972235	6	+	TSS region	transcription start site region 133482
Cpgi7851	15	102972346 to 102972691	345		CpG island	CpG island 7851
Mir196a-2	15	102973350 to 102973434	84	+	miRNA gene	microRNA 196a-2
Cpgi7852	15	102975705 to 102977670	1965		CpG island	CpG island 7852
Gm4200	15	102976255 to 102978186	1931		protein coding gene	predicted gene 4200
Hoxc9	15	102977032 to 102984444	7412	+	protein coding gene	homeobox C9
Tssr136719	15	102977463 to 102977478	15	-	TSS region	transcription start site region 136719
Cpgi7853	15	102978921 to 102979092	171		CpG island	CpG island 7853
Tssr136720	15	102979296 to 102979329	33	-	TSS region	transcription start site region 136720
Gm36878	15	102980480 to 102981242	762	-	lncRNA gene	predicted gene, 36878
Cpgi7854	15	102981172 to 102982593	1421		CpG island	CpG island 7854
Tssr133483	15	102981582 to 102981598	16	+	TSS region	transcription start site region 133483
Tssr133484	15	102981604 to 102981641	37	+	TSS region	transcription start site region 133484
Tssr133485	15	102982097 to 102982118	21	+	TSS region	transcription start site region 133485