Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:102968921-102989092

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hoxc10 15 102966796 to 102971893 5097 + protein coding gene homeobox C10
Tssr133481 15 102971436 to 102971474 38 + TSS region transcription start site region 133481
Tssr133482 15 102972229 to 102972235 6 + TSS region transcription start site region 133482
Cpgi7851 15 102972346 to 102972691 345 CpG island CpG island 7851
Mir196a-2 15 102973350 to 102973434 84 + miRNA gene microRNA 196a-2
Cpgi7852 15 102975705 to 102977670 1965 CpG island CpG island 7852
Gm4200 15 102976255 to 102978186 1931 protein coding gene predicted gene 4200
Hoxc9 15 102977032 to 102984444 7412 + protein coding gene homeobox C9
Tssr136719 15 102977463 to 102977478 15 - TSS region transcription start site region 136719
Cpgi7853 15 102978921 to 102979092 171 CpG island CpG island 7853
Tssr136720 15 102979296 to 102979329 33 - TSS region transcription start site region 136720
Gm36878 15 102980480 to 102981242 762 - lncRNA gene predicted gene, 36878
Cpgi7854 15 102981172 to 102982593 1421 CpG island CpG island 7854
Tssr133483 15 102981582 to 102981598 16 + TSS region transcription start site region 133483
Tssr133484 15 102981604 to 102981641 37 + TSS region transcription start site region 133484
Tssr133485 15 102982097 to 102982118 21 + TSS region transcription start site region 133485
Gm29852 15 102986689 to 102990306 3617 - lncRNA gene predicted gene, 29852
D15Mit16.1 15 102987916 to 102988038 122 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 16.1
Sluc34b 15 102988005 to 102988123 118 QTL susceptibility to lung cancer 34b
D15Mit16 15 102988005 to 102988123 118 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 16
Sluc34a 15 102988005 to 102988123 118 QTL susceptibility to lung cancer 34a
Bmca 15 102988005 to 102988123 118 QTL bile mucin accumulation
D15Mit16.2 15 102988108 to 102988222 114 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 16.2
Sluc34 15 102988123 to 97987052 -5001071 QTL susceptibility to lung cancer 34
Cal6 15 102988123 to 94974879 -8013244 heritable phenotypic marker caracul-like 6
Hyplip2 15 102988123 to 12402117 -90586006 QTL hyperlipidemia 2
Shar 15 102988123 to 99363421 -3624702 heritable phenotypic marker shiny and rough
Tssr133486 15 102988290 to 102988291 1 + TSS region transcription start site region 133486