Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Map3k12 | 15 | 19357 | - | protein coding gene | mitogen-activated protein kinase kinase kinase 12 | |
Gm46504 | 15 | 1027 | + | protein coding gene | predicted gene, 46504 | |
Cpgi7823 | 15 | 897 | CpG island | CpG island 7823 | ||
Tssr136703 | 15 | 49 | - | TSS region | transcription start site region 136703 | |
Tssr136704 | 15 | 20 | - | TSS region | transcription start site region 136704 | |
Cpgi7824 | 15 | 1012 | CpG island | CpG island 7824 | ||
Tarbp2 | 15 | 5484 | + | protein coding gene | TARBP2, RISC loading complex RNA binding subunit | |
Tssr133453 | 15 | 24 | + | TSS region | transcription start site region 133453 | |
Tssr133454 | 15 | 91 | + | TSS region | transcription start site region 133454 | |
Tssr133455 | 15 | 64 | + | TSS region | transcription start site region 133455 | |
Tssr133456 | 15 | 8 | + | TSS region | transcription start site region 133456 | |
Tssr133457 | 15 | 7 | + | TSS region | transcription start site region 133457 | |
Tssr133458 | 15 | 20 | + | TSS region | transcription start site region 133458 | |
Tssr133459 | 15 | 19 | + | TSS region | transcription start site region 133459 | |
Npff | 15 | 782 | - | protein coding gene | neuropeptide FF-amide peptide precursor | |
Gm28047 | 15 | 101224 | - | protein coding gene | predicted gene, 28047 | |
Tssr136705 | 15 | 4 | - | TSS region | transcription start site region 136705 | |
Atf7 | 15 | 99518 | - | protein coding gene | activating transcription factor 7 | |
Tssr136706 | 15 | 22 | - | TSS region | transcription start site region 136706 | |
Tssr136707 | 15 | 6 | - | TSS region | transcription start site region 136707 | |
5830427D02Rik | 15 | 4998 | + | lncRNA gene | RIKEN cDNA 5830427D02 gene | |
Tssr136708 | 15 | 33 | - | TSS region | transcription start site region 136708 | |
Cpgi7825 | 15 | 1160 | CpG island | CpG island 7825 | ||
Tssr136709 | 15 | 39 | - | TSS region | transcription start site region 136709 | |
Tssr136710 | 15 | 63 | - | TSS region | transcription start site region 136710 | |
Tssr133460 | 15 | 18 | + | TSS region | transcription start site region 133460 | |
Gm25141 | 15 | 106 | - | snRNA gene | predicted gene, 25141 | |
Tssr133461 | 15 | 9 | + | TSS region | transcription start site region 133461 | |
Rpl39-ps | 15 | 150 | + | pseudogene | ribosomal protein L39, pseudogene | |
Tssr133462 | 15 | 8 | + | TSS region | transcription start site region 133462 | |
Gm4544 | 15 | 3357 | + | lincRNA gene | predicted gene 4544 | |
Tssr133463 | 15 | 11 | + | TSS region | transcription start site region 133463 | |
Atp5g2 | 15 | 8179 | - | protein coding gene | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9) | |
Cpgi7826 | 15 | 700 | CpG island | CpG island 7826 | ||
Tssr136711 | 15 | 9 | - | TSS region | transcription start site region 136711 | |
Tssr136712 | 15 | 53 | - | TSS region | transcription start site region 136712 | |
Cpgi7827 | 15 | 903 | CpG island | CpG island 7827 | ||
Mir688 | 15 | 74 | - | miRNA gene | microRNA 688 | |
Tssr136713 | 15 | 24 | - | TSS region | transcription start site region 136713 | |
Tssr133464 | 15 | 19 | + | TSS region | transcription start site region 133464 | |
Tssr133465 | 15 | 23 | + | TSS region | transcription start site region 133465 | |
Tssr133466 | 15 | 16 | + | TSS region | transcription start site region 133466 | |
Cpgi7828 | 15 | 1041 | CpG island | CpG island 7828 | ||
Calcoco1 | 15 | 15401 | - | protein coding gene | calcium binding and coiled coil domain 1 | |
Tssr136714 | 15 | 13 | - | TSS region | transcription start site region 136714 | |
Tssr136715 | 15 | 77 | - | TSS region | transcription start site region 136715 | |
Cpgi7829 | 15 | 551 | CpG island | CpG island 7829 | ||
Tssr136716 | 15 | 53 | - | TSS region | transcription start site region 136716 | |
Tssr136717 | 15 | 17 | - | TSS region | transcription start site region 136717 | |
Tssr136718 | 15 | 12 | - | TSS region | transcription start site region 136718 | |
Gm36510 | 15 | 5630 | + | lncRNA gene | predicted gene, 36510 | |
Cpgi7830 | 15 | 207 | CpG island | CpG island 7830 | ||
Cpgi7831 | 15 | 273 | CpG island | CpG island 7831 | ||
Cpgi7832 | 15 | 159 | CpG island | CpG island 7832 | ||
Cpgi7833 | 15 | 1476 | CpG island | CpG island 7833 | ||
Gm38436 | 15 | 468 | - | lncRNA gene | predicted gene, 38436 | |
Tssr133467 | 15 | 24 | + | TSS region | transcription start site region 133467 | |
Tssr133468 | 15 | 5 | + | TSS region | transcription start site region 133468 | |
D15Mit219.1 | 15 | 113 | DNA segment | DNA segment, Chr 15, Massachusetts Institute of Technology 219.1 | ||
D15Mit219 | 15 | 90 | DNA segment | DNA segment, Chr 15, Massachusetts Institute of Technology 219 | ||
Gm49473 | 15 | 250 | - | pseudogene | predicted gene, 49473 | |
Gm36560 | 15 | 22049 | + | lincRNA gene | predicted gene, 36560 | |
Gm10831 | 15 | 1952 | unclassified non-coding RNA gene | predicted gene 10831 | ||
Tssr133469 | 15 | 1 | + | TSS region | transcription start site region 133469 | |
Cpgi7834 | 15 | 414 | CpG island | CpG island 7834 | ||
Cpgi7835 | 15 | 263 | CpG island | CpG island 7835 | ||
Cpgi7836 | 15 | 151 | CpG island | CpG island 7836 | ||
Cpgi7837 | 15 | 1500 | CpG island | CpG island 7837 | ||
Tssr133470 | 15 | 11 | + | TSS region | transcription start site region 133470 | |
Hoxc13 | 15 | 7683 | + | protein coding gene | homeobox C13 | |
Tssr133471 | 15 | 5 | + | TSS region | transcription start site region 133471 | |
Tssr133472 | 15 | 22 | + | TSS region | transcription start site region 133472 | |
Tssr133473 | 15 | 27 | + | TSS region | transcription start site region 133473 | |
Cpgi7838 | 15 | 465 | CpG island | CpG island 7838 | ||
Tssr133474 | 15 | 6 | + | TSS region | transcription start site region 133474 | |
Tssr4741 | 15 | 46 | + | TSS region | transcription start site region 4741 | |
Cpgi7839 | 15 | 155 | CpG island | CpG island 7839 | ||
Cpgi7840 | 15 | 181 | CpG island | CpG island 7840 | ||
Gm36820 | 15 | 1666 | - | lncRNA gene | predicted gene, 36820 | |
Cpgi7841 | 15 | 349 | CpG island | CpG island 7841 | ||
Cpgi7842 | 15 | 880 | CpG island | CpG island 7842 | ||
Tssr133475 | 15 | 18 | + | TSS region | transcription start site region 133475 | |
Tssr133476 | 15 | 12 | + | TSS region | transcription start site region 133476 | |
Hoxc12 | 15 | 1664 | + | protein coding gene | homeobox C12 | |
Cpgi7843 | 15 | 319 | CpG island | CpG island 7843 | ||
Cpgi7844 | 15 | 382 | CpG island | CpG island 7844 | ||
Cpgi7845 | 15 | 806 | CpG island | CpG island 7845 | ||
Hotair | 15 | 3668 | - | lincRNA gene | HOX transcript antisense RNA (non-protein coding) | |
Gm27337 | 15 | 68 | + | unclassified non-coding RNA gene | predicted gene, 27337 | |
Gm27443 | 15 | 97 | + | unclassified non-coding RNA gene | predicted gene, 27443 | |
Gm28011 | 15 | 174 | + | unclassified non-coding RNA gene | predicted gene, 28011 | |
Cpgi7846 | 15 | 326 | CpG island | CpG island 7846 | ||
Gm27535 | 15 | 156 | + | unclassified non-coding RNA gene | predicted gene, 27535 | |
Cpgi7847 | 15 | 1035 | CpG island | CpG island 7847 | ||
Tssr4742 | 15 | 23 | + | TSS region | transcription start site region 4742 | |
Hoxc11 | 15 | 2175 | + | protein coding gene | homeobox C11 | |
Cpgi7848 | 15 | 848 | CpG island | CpG island 7848 | ||
Cpgi7849 | 15 | 361 | CpG island | CpG island 7849 | ||
Cpgi7850 | 15 | 1474 | CpG island | CpG island 7850 | ||
Tssr133477 | 15 | 12 | + | TSS region | transcription start site region 133477 | |
Tssr133478 | 15 | 22 | + | TSS region | transcription start site region 133478 | |
Tssr133479 | 15 | 18 | + | TSS region | transcription start site region 133479 | |
Hoxc10 | 15 | 5097 | + | protein coding gene | homeobox C10 | |
Tssr133480 | 15 | 14 | + | TSS region | transcription start site region 133480 | |
Tssr133481 | 15 | 38 | + | TSS region | transcription start site region 133481 | |
Tssr133482 | 15 | 6 | + | TSS region | transcription start site region 133482 | |
Cpgi7851 | 15 | 345 | CpG island | CpG island 7851 | ||
Mir196a-2 | 15 | 84 | + | miRNA gene | microRNA 196a-2 | |
Cpgi7852 | 15 | 1965 | CpG island | CpG island 7852 | ||
Gm4200 | 15 | 1931 | protein coding gene | predicted gene 4200 | ||
Hoxc9 | 15 | 7412 | + | protein coding gene | homeobox C9 | |
Tssr136719 | 15 | 15 | - | TSS region | transcription start site region 136719 | |
Cpgi7853 | 15 | 171 | CpG island | CpG island 7853 | ||
Tssr136720 | 15 | 33 | - | TSS region | transcription start site region 136720 | |
Gm36878 | 15 | 762 | - | lncRNA gene | predicted gene, 36878 | |
Cpgi7854 | 15 | 1421 | CpG island | CpG island 7854 | ||
Tssr133483 | 15 | 16 | + | TSS region | transcription start site region 133483 | |
Tssr133484 | 15 | 37 | + | TSS region | transcription start site region 133484 | |
Tssr133485 | 15 | 21 | + | TSS region | transcription start site region 133485 | |
Gm29852 | 15 | 3617 | - | lncRNA gene | predicted gene, 29852 | |
D15Mit16.1 | 15 | 122 | DNA segment | DNA segment, Chr 15, Massachusetts Institute of Technology 16.1 | ||
Bmca | 15 | 118 | QTL | bile mucin accumulation | ||
D15Mit16 | 15 | 118 | DNA segment | DNA segment, Chr 15, Massachusetts Institute of Technology 16 | ||
Sluc34b | 15 | 118 | QTL | susceptibility to lung cancer 34b | ||
Sluc34a | 15 | 118 | QTL | susceptibility to lung cancer 34a | ||
D15Mit16.2 | 15 | 114 | DNA segment | DNA segment, Chr 15, Massachusetts Institute of Technology 16.2 | ||
Cal6 | 15 | -8013244 | heritable phenotypic marker | caracul-like 6 | ||
Shar | 15 | -3624702 | heritable phenotypic marker | shiny and rough | ||
Hyplip2 | 15 | -90586006 | QTL | hyperlipidemia 2 | ||
Sluc34 | 15 | -5001071 | QTL | susceptibility to lung cancer 34 | ||
Tssr133486 | 15 | 1 | + | TSS region | transcription start site region 133486 | |
Cpgi7855 | 15 | 1239 | CpG island | CpG island 7855 | ||
Tssr133487 | 15 | 11 | + | TSS region | transcription start site region 133487 | |
Tssr133488 | 15 | 15 | + | TSS region | transcription start site region 133488 | |
Tssr133489 | 15 | 42 | + | TSS region | transcription start site region 133489 | |
Tssr133490 | 15 | 14 | + | TSS region | transcription start site region 133490 | |
Hoxc8 | 15 | 3504 | + | protein coding gene | homeobox C8 | |
Tssr133491 | 15 | 19 | + | TSS region | transcription start site region 133491 | |
Tssr133492 | 15 | 1 | + | TSS region | transcription start site region 133492 | |
Tssr133493 | 15 | 10 | + | TSS region | transcription start site region 133493 | |
Tssr133494 | 15 | 5 | + | TSS region | transcription start site region 133494 | |
Tssr133495 | 15 | 3 | + | TSS region | transcription start site region 133495 | |
Tssr133496 | 15 | 14 | + | TSS region | transcription start site region 133496 | |
Tssr133497 | 15 | 6 | + | TSS region | transcription start site region 133497 | |
Tssr133498 | 15 | 5 | + | TSS region | transcription start site region 133498 | |
Tssr133499 | 15 | 18 | + | TSS region | transcription start site region 133499 | |
D15Mit15 | 15 | 158 | DNA segment | DNA segment, Chr 15, Massachusetts Institute of Technology 15 | ||
Skull22 | 15 | 158 | QTL | skull morphology 22 | ||
Epfpq3 | 15 | -24276369 | QTL | epididymal fat percentage QTL 3 | ||
W3q6 | 15 | -24276369 | QTL | weight 3 weeks QTL 6 | ||
Cpgi7856 | 15 | 222 | CpG island | CpG island 7856 | ||
Gm29905 | 15 | 803 | - | lncRNA gene | predicted gene, 29905 | |
Cpgi7857 | 15 | 210 | CpG island | CpG island 7857 | ||
Tssr133500 | 15 | 11 | + | TSS region | transcription start site region 133500 | |
Tssr133501 | 15 | 20 | + | TSS region | transcription start site region 133501 | |
Hoxc6 | 15 | 13624 | + | protein coding gene | homeobox C6 | |
Cpgi7858 | 15 | 672 | CpG island | CpG island 7858 | ||
Cpgi7859 | 15 | 344 | CpG island | CpG island 7859 | ||
Cpgi7860 | 15 | 231 | CpG island | CpG island 7860 | ||
Tssr133502 | 15 | 26 | + | TSS region | transcription start site region 133502 | |
Tssr133503 | 15 | 27 | + | TSS region | transcription start site region 133503 | |
Tssr133504 | 15 | 13 | + | TSS region | transcription start site region 133504 | |
Cpgi7861 | 15 | 199 | CpG island | CpG island 7861 | ||
Tssr133505 | 15 | 13 | + | TSS region | transcription start site region 133505 | |
Cpgi7862 | 15 | 282 | CpG island | CpG island 7862 | ||
Tssr133506 | 15 | 14 | + | TSS region | transcription start site region 133506 | |
Hoxc5 | 15 | 3421 | + | protein coding gene | homeobox C5 | |
Tssr133507 | 15 | 16 | + | TSS region | transcription start site region 133507 | |
Cpgi7863 | 15 | 433 | CpG island | CpG island 7863 | ||
Tssr4743 | 15 | 31 | + | TSS region | transcription start site region 4743 | |
Tssr133508 | 15 | 19 | + | TSS region | transcription start site region 133508 | |
Cpgi7864 | 15 | 484 | CpG island | CpG island 7864 | ||
Mir615 | 15 | 91 | + | miRNA gene | microRNA 615 | |
Hoxc4 | 15 | 17918 | + | protein coding gene | homeobox C4 | |
Tssr133509 | 15 | 9 | + | TSS region | transcription start site region 133509 | |
Gm30528 | 15 | 36973 | - | lncRNA gene | predicted gene, 30528 | |
Cpgi7865 | 15 | 340 | CpG island | CpG island 7865 | ||
Cpgi7866 | 15 | 509 | CpG island | CpG island 7866 | ||
Tssr133510 | 15 | 25 | + | TSS region | transcription start site region 133510 | |
Tssr133511 | 15 | 19 | + | TSS region | transcription start site region 133511 | |
Tssr133512 | 15 | 20 | + | TSS region | transcription start site region 133512 | |
Cpgi7867 | 15 | 432 | CpG island | CpG island 7867 | ||
Cpgi7868 | 15 | 354 | CpG island | CpG island 7868 | ||
5730585A16Rik | 15 | 1026 | - | protein coding gene | RIKEN cDNA 5730585A16 gene | |
Cpgi7869 | 15 | 496 | CpG island | CpG island 7869 | ||
Cpgi7870 | 15 | 243 | CpG island | CpG island 7870 | ||
Cpgi7871 | 15 | 356 | CpG island | CpG island 7871 | ||
Cpgi7872 | 15 | 944 | CpG island | CpG island 7872 | ||
Gm28876 | 15 | 5960 | - | lincRNA gene | predicted gene 28876 | |
Tssr136721 | 15 | 3 | - | TSS region | transcription start site region 136721 | |
Tssr136722 | 15 | 6 | - | TSS region | transcription start site region 136722 | |
Tssr136723 | 15 | 16 | - | TSS region | transcription start site region 136723 | |
Tssr133513 | 15 | 13 | + | TSS region | transcription start site region 133513 | |
Gm10830 | 15 | 2832 | + | lincRNA gene | predicted gene 10830 | |
Gm28265 | 15 | 2318 | - | lincRNA gene | predicted gene 28265 | |
Cpgi7873 | 15 | 237 | CpG island | CpG island 7873 | ||
D930007P13Rik | 15 | 23758 | - | lincRNA gene | Riken cDNA D930007P13 gene | |
Tssr133514 | 15 | 11 | + | TSS region | transcription start site region 133514 | |
Tssr133515 | 15 | 13 | + | TSS region | transcription start site region 133515 | |
Tssr133516 | 15 | 15 | + | TSS region | transcription start site region 133516 |