Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:101994588-102214601

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(15Krt80-Krt18)1Tmm 15 101348315 to 102032026 683711 chromosomal deletion deletion, Chr 15, Thomas M Magin 1
Krt8 15 101996711 to 102004342 7631 - protein coding gene keratin 8
Tssr133312 15 101999486 to 101999493 7 + TSS region transcription start site region 133312
Cpgi7792 15 102002934 to 102003414 480 CpG island CpG island 7792
Cpgi7793 15 102003825 to 102004339 514 CpG island CpG island 7793
Tssr136647 15 102004305 to 102004321 16 - TSS region transcription start site region 136647
Gm36026 15 102006143 to 102009445 3302 + lincRNA gene predicted gene, 36026
Tssr4735 15 102009124 to 102009143 19 - TSS region transcription start site region 4735
Gm41404 15 102010591 to 102017249 6658 - lncRNA gene predicted gene, 41404
Cpgi7794 15 102027914 to 102028472 558 CpG island CpG island 7794
Tssr133313 15 102028200 to 102028211 11 + TSS region transcription start site region 133313
Krt18 15 102028216 to 102032026 3810 + protein coding gene keratin 18
Tssr133314 15 102028218 to 102028235 17 + TSS region transcription start site region 133314
D15Mit40 15 102029302 to 102029441 139 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 40
Tssr133315 15 102029881 to 102029893 12 + TSS region transcription start site region 133315
Gm41405 15 102045318 to 102047265 1947 + lncRNA gene predicted gene, 41405
Cpgi7795 15 102052098 to 102052498 400 CpG island CpG island 7795
Cpgi7796 15 102065751 to 102066003 252 CpG island CpG island 7796
Cpgi7797 15 102073535 to 102074828 1293 CpG island CpG island 7797
Tssr136648 15 102073589 to 102073611 22 - TSS region transcription start site region 136648
Tssr133316 15 102073639 to 102073642 3 + TSS region transcription start site region 133316
Tssr133317 15 102073644 to 102073654 10 + TSS region transcription start site region 133317
Eif4b 15 102073773 to 102097173 23400 + protein coding gene eukaryotic translation initiation factor 4B
Tssr133318 15 102073891 to 102073903 12 + TSS region transcription start site region 133318
Tssr133319 15 102073915 to 102073934 19 + TSS region transcription start site region 133319
Gm9693 15 102074153 to 102075968 1815 unclassified gene predicted gene 9693
Tssr133320 15 102074189 to 102074201 12 + TSS region transcription start site region 133320
A030007N12Rik 15 102077423 to 102080223 2800 unclassified non-coding RNA gene RIKEN cDNA A030007N12 gene
Tssr133321 15 102089969 to 102089988 19 + TSS region transcription start site region 133321
Tssr133322 15 102095306 to 102095321 15 + TSS region transcription start site region 133322
Tssr133323 15 102098443 to 102098498 55 + TSS region transcription start site region 133323
Cpgi7798 15 102099953 to 102101102 1149 CpG island CpG island 7798
Tssr133324 15 102100365 to 102100384 19 + TSS region transcription start site region 133324
Tssr133325 15 102100394 to 102100423 29 + TSS region transcription start site region 133325
Tns2 15 102100413 to 102116401 15988 + protein coding gene tensin 2
Tssr133326 15 102102198 to 102102242 44 + TSS region transcription start site region 133326
Tssr133327 15 102102926 to 102102975 49 + TSS region transcription start site region 133327
Tssr4736 15 102102980 to 102102985 5 + TSS region transcription start site region 4736
Tssr133328 15 102103076 to 102103083 7 + TSS region transcription start site region 133328
Tssr133329 15 102104347 to 102104358 11 + TSS region transcription start site region 133329
Tssr133330 15 102104361 to 102104373 12 + TSS region transcription start site region 133330
Tssr133331 15 102104376 to 102104388 12 + TSS region transcription start site region 133331
Tssr133332 15 102104389 to 102104418 29 + TSS region transcription start site region 133332
Tssr133333 15 102104506 to 102104520 14 + TSS region transcription start site region 133333
Tssr133334 15 102104530 to 102104539 9 + TSS region transcription start site region 133334
Tssr133335 15 102104588 to 102104601 13 + TSS region transcription start site region 133335
Tssr133336 15 102106150 to 102106163 13 + TSS region transcription start site region 133336
Cpgi7799 15 102106598 to 102107392 794 CpG island CpG island 7799
Tssr133337 15 102113025 to 102113061 36 + TSS region transcription start site region 133337
Spryd3 15 102116528 to 102136234 19706 - protein coding gene SPRY domain containing 3
Tssr136649 15 102118946 to 102118975 29 - TSS region transcription start site region 136649
Tssr133338 15 102119074 to 102119093 19 + TSS region transcription start site region 133338
Cpgi7800 15 102135720 to 102136683 963 CpG island CpG island 7800
Tssr136650 15 102136177 to 102136222 45 - TSS region transcription start site region 136650
Tssr136651 15 102136225 to 102136230 5 - TSS region transcription start site region 136651
Tssr133339 15 102136265 to 102136271 6 + TSS region transcription start site region 133339
Igfbp6 15 102144362 to 102149511 5149 + protein coding gene insulin-like growth factor binding protein 6
Tssr133340 15 102144467 to 102144486 19 + TSS region transcription start site region 133340
Tssr133341 15 102144496 to 102144514 18 + TSS region transcription start site region 133341
Cpgi7801 15 102144499 to 102144920 421 CpG island CpG island 7801
Tssr133342 15 102144689 to 102144698 9 + TSS region transcription start site region 133342
Tssr133343 15 102144715 to 102144727 12 + TSS region transcription start site region 133343
Tssr133344 15 102147875 to 102147901 26 + TSS region transcription start site region 133344
Tssr133345 15 102150361 to 102150376 15 + TSS region transcription start site region 133345
Tssr133346 15 102150382 to 102150393 11 + TSS region transcription start site region 133346
Tssr133347 15 102150405 to 102150418 13 + TSS region transcription start site region 133347
Tssr133348 15 102150502 to 102150577 75 + TSS region transcription start site region 133348
Soat2 15 102150526 to 102163469 12943 + protein coding gene sterol O-acyltransferase 2
Tssr4737 15 102150578 to 102150581 3 + TSS region transcription start site region 4737
Tssr133349 15 102150590 to 102150601 11 + TSS region transcription start site region 133349
Tssr133350 15 102151046 to 102151059 13 + TSS region transcription start site region 133350
Tssr133351 15 102151078 to 102151098 20 + TSS region transcription start site region 133351
Tssr133352 15 102151108 to 102151124 16 + TSS region transcription start site region 133352
Cpgi7802 15 102156856 to 102157223 367 CpG island CpG island 7802
Cpgi7803 15 102160459 to 102160701 242 CpG island CpG island 7803
D15Mit246 15 102165961 to 102166079 118 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 246
Csad 15 102176999 to 102204724 27725 - protein coding gene cysteine sulfinic acid decarboxylase
Tssr133353 15 102177318 to 102177321 3 + TSS region transcription start site region 133353
Tssr136652 15 102188934 to 102188951 17 - TSS region transcription start site region 136652
Tssr136653 15 102188952 to 102188971 19 - TSS region transcription start site region 136653
Tssr136654 15 102188983 to 102188996 13 - TSS region transcription start site region 136654
Tssr136655 15 102189005 to 102189030 25 - TSS region transcription start site region 136655
Tssr136656 15 102189032 to 102189050 18 - TSS region transcription start site region 136656
Tssr136657 15 102196546 to 102196550 4 - TSS region transcription start site region 136657
Cpgi7804 15 102203003 to 102204535 1532 CpG island CpG island 7804
Tssr133354 15 102203177 to 102203218 41 + TSS region transcription start site region 133354
Tssr136658 15 102203400 to 102203443 43 - TSS region transcription start site region 136658
Tssr133355 15 102203480 to 102203538 58 + TSS region transcription start site region 133355
Tssr133356 15 102203639 to 102203693 54 + TSS region transcription start site region 133356
Zfp740 15 102203645 to 102215610 11965 + protein coding gene zinc finger protein 740
Tssr136659 15 102203853 to 102203909 56 - TSS region transcription start site region 136659
Tssr133357 15 102204015 to 102204075 60 + TSS region transcription start site region 133357
Tssr133358 15 102204079 to 102204118 39 + TSS region transcription start site region 133358
Tssr136660 15 102204191 to 102204221 30 - TSS region transcription start site region 136660
Tssr136661 15 102204227 to 102204268 41 - TSS region transcription start site region 136661
Tssr136662 15 102204274 to 102204290 16 - TSS region transcription start site region 136662