Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:101912836-102053051

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(15Krt80-Krt18)1Tmm 15 101348315 to 102032026 683711 chromosomal deletion deletion, Chr 15, Thomas M Magin 1
Krt4 15 101918535 to 101924735 6200 - protein coding gene keratin 4
Tssr136637 15 101918568 to 101918578 10 - TSS region transcription start site region 136637
Tssr136638 15 101918579 to 101918590 11 - TSS region transcription start site region 136638
Tssr136639 15 101918800 to 101918819 19 - TSS region transcription start site region 136639
Cpgi7789 15 101924165 to 101924651 486 CpG island CpG island 7789
Tssr136640 15 101924725 to 101924742 17 - TSS region transcription start site region 136640
Tssr136641 15 101929276 to 101929281 5 - TSS region transcription start site region 136641
Krt79 15 101929332 to 101940324 10992 - protein coding gene keratin 79
Mdq17 15 101937324 to 101937324 0 QTL mammary ductal QTL 17
Tssr136642 15 101938663 to 101938696 33 - TSS region transcription start site region 136642
Tssr133311 15 101939162 to 101939178 16 + TSS region transcription start site region 133311
Tssr136643 15 101940255 to 101940268 13 - TSS region transcription start site region 136643
Tssr136644 15 101940427 to 101940434 7 - TSS region transcription start site region 136644
Krt78 15 101946001 to 101954287 8286 - protein coding gene keratin 78
Tssr136645 15 101954249 to 101954265 16 - TSS region transcription start site region 136645
Tssr136646 15 101954276 to 101954294 18 - TSS region transcription start site region 136646
Cpgi7790 15 101977016 to 101977879 863 CpG island CpG island 7790
D15Ertd430e 15 101982836 to 101983051 215 DNA segment DNA segment, Chr 15, ERATO Doi 430, expressed
Cpgi7791 15 101983078 to 101983468 390 CpG island CpG island 7791
Krt8 15 101996711 to 102004342 7631 - protein coding gene keratin 8
Tssr133312 15 101999486 to 101999493 7 + TSS region transcription start site region 133312
Cpgi7792 15 102002934 to 102003414 480 CpG island CpG island 7792
Cpgi7793 15 102003825 to 102004339 514 CpG island CpG island 7793
Tssr136647 15 102004305 to 102004321 16 - TSS region transcription start site region 136647
Gm36026 15 102006143 to 102009445 3302 + lincRNA gene predicted gene, 36026
Tssr4735 15 102009124 to 102009143 19 - TSS region transcription start site region 4735
Gm41404 15 102010591 to 102017249 6658 - lncRNA gene predicted gene, 41404
Cpgi7794 15 102027914 to 102028472 558 CpG island CpG island 7794
Tssr133313 15 102028200 to 102028211 11 + TSS region transcription start site region 133313
Krt18 15 102028216 to 102032026 3810 + protein coding gene keratin 18
Tssr133314 15 102028218 to 102028235 17 + TSS region transcription start site region 133314
D15Mit40 15 102029302 to 102029441 139 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 40
Tssr133315 15 102029881 to 102029893 12 + TSS region transcription start site region 133315
Gm41405 15 102045318 to 102047265 1947 + lncRNA gene predicted gene, 41405
Cpgi7795 15 102052098 to 102052498 400 CpG island CpG island 7795