Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:101863825-102144339

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82 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(15Krt80-Krt18)1Tmm 15 101348315 to 102032026 683711 chromosomal deletion deletion, Chr 15, Thomas M Magin 1
Krt77 15 101858731 to 101869705 10974 - protein coding gene keratin 77
Tssr136634 15 101869695 to 101869712 17 - TSS region transcription start site region 136634
Tssr136635 15 101869802 to 101869810 8 - TSS region transcription start site region 136635
Krt76 15 101884351 to 101892920 8569 - protein coding gene keratin 76
Gm44356 15 101888397 to 101888507 110 + miRNA gene predicted gene, 44356
Tssr136636 15 101892916 to 101892921 5 - TSS region transcription start site region 136636
Gm49434 15 101906924 to 101910149 3225 - pseudogene predicted gene, 49434
Krt4 15 101918535 to 101924735 6200 - protein coding gene keratin 4
Tssr136637 15 101918568 to 101918578 10 - TSS region transcription start site region 136637
Tssr136638 15 101918579 to 101918590 11 - TSS region transcription start site region 136638
Tssr136639 15 101918800 to 101918819 19 - TSS region transcription start site region 136639
Cpgi7789 15 101924165 to 101924651 486 CpG island CpG island 7789
Tssr136640 15 101924725 to 101924742 17 - TSS region transcription start site region 136640
Tssr136641 15 101929276 to 101929281 5 - TSS region transcription start site region 136641
Krt79 15 101929332 to 101940324 10992 - protein coding gene keratin 79
Mdq17 15 101937324 to 101937324 0 QTL mammary ductal QTL 17
Tssr136642 15 101938663 to 101938696 33 - TSS region transcription start site region 136642
Tssr133311 15 101939162 to 101939178 16 + TSS region transcription start site region 133311
Tssr136643 15 101940255 to 101940268 13 - TSS region transcription start site region 136643
Tssr136644 15 101940427 to 101940434 7 - TSS region transcription start site region 136644
Krt78 15 101946001 to 101954287 8286 - protein coding gene keratin 78
Tssr136645 15 101954249 to 101954265 16 - TSS region transcription start site region 136645
Tssr136646 15 101954276 to 101954294 18 - TSS region transcription start site region 136646
Cpgi7790 15 101977016 to 101977879 863 CpG island CpG island 7790
D15Ertd430e 15 101982836 to 101983051 215 DNA segment DNA segment, Chr 15, ERATO Doi 430, expressed
Cpgi7791 15 101983078 to 101983468 390 CpG island CpG island 7791
Krt8 15 101996711 to 102004342 7631 - protein coding gene keratin 8
Tssr133312 15 101999486 to 101999493 7 + TSS region transcription start site region 133312
Cpgi7792 15 102002934 to 102003414 480 CpG island CpG island 7792
Cpgi7793 15 102003825 to 102004339 514 CpG island CpG island 7793
Tssr136647 15 102004305 to 102004321 16 - TSS region transcription start site region 136647
Gm36026 15 102006143 to 102009445 3302 + lincRNA gene predicted gene, 36026
Tssr4735 15 102009124 to 102009143 19 - TSS region transcription start site region 4735
Gm41404 15 102010591 to 102017249 6658 - lncRNA gene predicted gene, 41404
Cpgi7794 15 102027914 to 102028472 558 CpG island CpG island 7794
Tssr133313 15 102028200 to 102028211 11 + TSS region transcription start site region 133313
Krt18 15 102028216 to 102032026 3810 + protein coding gene keratin 18
Tssr133314 15 102028218 to 102028235 17 + TSS region transcription start site region 133314
D15Mit40 15 102029302 to 102029441 139 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 40
Tssr133315 15 102029881 to 102029893 12 + TSS region transcription start site region 133315
Gm41405 15 102045318 to 102047265 1947 + lncRNA gene predicted gene, 41405
Cpgi7795 15 102052098 to 102052498 400 CpG island CpG island 7795
Cpgi7796 15 102065751 to 102066003 252 CpG island CpG island 7796
Cpgi7797 15 102073535 to 102074828 1293 CpG island CpG island 7797
Tssr136648 15 102073589 to 102073611 22 - TSS region transcription start site region 136648
Tssr133316 15 102073639 to 102073642 3 + TSS region transcription start site region 133316
Tssr133317 15 102073644 to 102073654 10 + TSS region transcription start site region 133317
Eif4b 15 102073773 to 102097173 23400 + protein coding gene eukaryotic translation initiation factor 4B
Tssr133318 15 102073891 to 102073903 12 + TSS region transcription start site region 133318
Tssr133319 15 102073915 to 102073934 19 + TSS region transcription start site region 133319
Gm9693 15 102074153 to 102075968 1815 unclassified gene predicted gene 9693
Tssr133320 15 102074189 to 102074201 12 + TSS region transcription start site region 133320
A030007N12Rik 15 102077423 to 102080223 2800 unclassified non-coding RNA gene RIKEN cDNA A030007N12 gene
Tssr133321 15 102089969 to 102089988 19 + TSS region transcription start site region 133321
Tssr133322 15 102095306 to 102095321 15 + TSS region transcription start site region 133322
Tssr133323 15 102098443 to 102098498 55 + TSS region transcription start site region 133323
Cpgi7798 15 102099953 to 102101102 1149 CpG island CpG island 7798
Tssr133324 15 102100365 to 102100384 19 + TSS region transcription start site region 133324
Tssr133325 15 102100394 to 102100423 29 + TSS region transcription start site region 133325
Tns2 15 102100413 to 102116401 15988 + protein coding gene tensin 2
Tssr133326 15 102102198 to 102102242 44 + TSS region transcription start site region 133326
Tssr133327 15 102102926 to 102102975 49 + TSS region transcription start site region 133327
Tssr4736 15 102102980 to 102102985 5 + TSS region transcription start site region 4736
Tssr133328 15 102103076 to 102103083 7 + TSS region transcription start site region 133328
Tssr133329 15 102104347 to 102104358 11 + TSS region transcription start site region 133329
Tssr133330 15 102104361 to 102104373 12 + TSS region transcription start site region 133330
Tssr133331 15 102104376 to 102104388 12 + TSS region transcription start site region 133331
Tssr133332 15 102104389 to 102104418 29 + TSS region transcription start site region 133332
Tssr133333 15 102104506 to 102104520 14 + TSS region transcription start site region 133333
Tssr133334 15 102104530 to 102104539 9 + TSS region transcription start site region 133334
Tssr133335 15 102104588 to 102104601 13 + TSS region transcription start site region 133335
Tssr133336 15 102106150 to 102106163 13 + TSS region transcription start site region 133336
Cpgi7799 15 102106598 to 102107392 794 CpG island CpG island 7799
Tssr133337 15 102113025 to 102113061 36 + TSS region transcription start site region 133337
Spryd3 15 102116528 to 102136234 19706 - protein coding gene SPRY domain containing 3
Tssr136649 15 102118946 to 102118975 29 - TSS region transcription start site region 136649
Tssr133338 15 102119074 to 102119093 19 + TSS region transcription start site region 133338
Cpgi7800 15 102135720 to 102136683 963 CpG island CpG island 7800
Tssr136650 15 102136177 to 102136222 45 - TSS region transcription start site region 136650
Tssr136651 15 102136225 to 102136230 5 - TSS region transcription start site region 136651
Tssr133339 15 102136265 to 102136271 6 + TSS region transcription start site region 133339