Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:101693165-101943170

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Krt6a 15 101689928 to 101694305 4377 - protein coding gene keratin 6A
Tssr136592 15 101693846 to 101693880 34 - TSS region transcription start site region 136592
Tssr136593 15 101694299 to 101694318 19 - TSS region transcription start site region 136593
Krt5 15 101707070 to 101712891 5821 - protein coding gene keratin 5
Tssr136594 15 101707427 to 101707445 18 - TSS region transcription start site region 136594
Tssr136595 15 101707549 to 101707563 14 - TSS region transcription start site region 136595
Tssr136596 15 101707581 to 101707593 12 - TSS region transcription start site region 136596
Tssr136597 15 101709613 to 101709627 14 - TSS region transcription start site region 136597
Tssr136598 15 101709648 to 101709663 15 - TSS region transcription start site region 136598
Tssr136599 15 101709716 to 101709753 37 - TSS region transcription start site region 136599
Tssr136600 15 101709837 to 101709856 19 - TSS region transcription start site region 136600
Gm44323 15 101710274 to 101710402 128 + miRNA gene predicted gene, 44323
Tssr133305 15 101711594 to 101711607 13 + TSS region transcription start site region 133305
Tssr136601 15 101712637 to 101712649 12 - TSS region transcription start site region 136601
Tssr136602 15 101712897 to 101712911 14 - TSS region transcription start site region 136602
Krt71 15 101733949 to 101743097 9148 - protein coding gene keratin 71
Tssr136603 15 101734306 to 101734313 7 - TSS region transcription start site region 136603
Tssr136604 15 101734403 to 101734412 9 - TSS region transcription start site region 136604
Tssr136605 15 101734414 to 101734419 5 - TSS region transcription start site region 136605
Tssr136606 15 101734485 to 101734495 10 - TSS region transcription start site region 136606
Tssr133306 15 101740232 to 101740238 6 + TSS region transcription start site region 133306
Tssr4731 15 101740240 to 101740249 9 + TSS region transcription start site region 4731
Tssr136607 15 101740352 to 101740362 10 - TSS region transcription start site region 136607
Tssr136608 15 101742918 to 101742929 11 - TSS region transcription start site region 136608
Tssr4732 15 101743031 to 101743040 9 - TSS region transcription start site region 4732
Tssr136609 15 101743099 to 101743117 18 - TSS region transcription start site region 136609
Tssr4733 15 101743127 to 101743145 18 - TSS region transcription start site region 4733
Krt74 15 101754259 to 101763504 9245 - pseudogene keratin 74
Tssr136610 15 101763557 to 101763566 9 - TSS region transcription start site region 136610
Krt72 15 101776560 to 101786458 9898 - protein coding gene keratin 72
Cpgi7785 15 101786133 to 101786538 405 CpG island CpG island 7785
Tssr136611 15 101786515 to 101786528 13 - TSS region transcription start site region 136611
Tssr136612 15 101786554 to 101786568 14 - TSS region transcription start site region 136612
Krt73 15 101793308 to 101802332 9024 - protein coding gene keratin 73
Tssr136613 15 101802350 to 101802367 17 - TSS region transcription start site region 136613
Krt2 15 101810689 to 101818169 7480 - protein coding gene keratin 2
Cpgi7786 15 101817663 to 101818072 409 CpG island CpG island 7786
Tssr136614 15 101818165 to 101818170 5 - TSS region transcription start site region 136614
Gm35972 15 101826246 to 101827656 1410 - lncRNA gene predicted gene, 35972
Krt1 15 101845426 to 101850786 5360 - protein coding gene keratin 1
Tssr136615 15 101845469 to 101845487 18 - TSS region transcription start site region 136615
Tssr136616 15 101845660 to 101845671 11 - TSS region transcription start site region 136616
Tssr136617 15 101845761 to 101845772 11 - TSS region transcription start site region 136617
Tssr136618 15 101845887 to 101845899 12 - TSS region transcription start site region 136618
Cpgi7787 15 101845914 to 101846447 533 CpG island CpG island 7787
Tssr136619 15 101845933 to 101845953 20 - TSS region transcription start site region 136619
Tssr136620 15 101845954 to 101845997 43 - TSS region transcription start site region 136620
Tssr136621 15 101846034 to 101846046 12 - TSS region transcription start site region 136621
Tssr136622 15 101846274 to 101846285 11 - TSS region transcription start site region 136622
Tssr136623 15 101846391 to 101846410 19 - TSS region transcription start site region 136623
Tssr136624 15 101846411 to 101846422 11 - TSS region transcription start site region 136624
Tssr136625 15 101846850 to 101846870 20 - TSS region transcription start site region 136625
Tssr136626 15 101846879 to 101846904 25 - TSS region transcription start site region 136626
Tssr136627 15 101846993 to 101847002 9 - TSS region transcription start site region 136627
Tssr136628 15 101848131 to 101848160 29 - TSS region transcription start site region 136628
Tssr136629 15 101849049 to 101849060 11 - TSS region transcription start site region 136629
Tssr136630 15 101849073 to 101849114 41 - TSS region transcription start site region 136630
Tssr136631 15 101849118 to 101849132 14 - TSS region transcription start site region 136631
Tssr133307 15 101850123 to 101850134 11 + TSS region transcription start site region 133307
Tssr133308 15 101850143 to 101850164 21 + TSS region transcription start site region 133308
Tssr133309 15 101850341 to 101850352 11 + TSS region transcription start site region 133309
Tssr136632 15 101850778 to 101850792 14 - TSS region transcription start site region 136632
Tssr136633 15 101851980 to 101851984 4 - TSS region transcription start site region 136633
Tssr133310 15 101854753 to 101854759 6 + TSS region transcription start site region 133310
Tssr4734 15 101858033 to 101858040 7 + TSS region transcription start site region 4734
Krt77 15 101858731 to 101869705 10974 - protein coding gene keratin 77
Cpgi7788 15 101859524 to 101860422 898 CpG island CpG island 7788
Tssr136634 15 101869695 to 101869712 17 - TSS region transcription start site region 136634
Tssr136635 15 101869802 to 101869810 8 - TSS region transcription start site region 136635
Krt76 15 101884351 to 101892920 8569 - protein coding gene keratin 76
Gm44356 15 101888397 to 101888507 110 + miRNA gene predicted gene, 44356
Tssr136636 15 101892916 to 101892921 5 - TSS region transcription start site region 136636
Gm49434 15 101906924 to 101910149 3225 - pseudogene predicted gene, 49434
Krt4 15 101918535 to 101924735 6200 - protein coding gene keratin 4
Tssr136637 15 101918568 to 101918578 10 - TSS region transcription start site region 136637
Tssr136638 15 101918579 to 101918590 11 - TSS region transcription start site region 136638
Tssr136639 15 101918800 to 101918819 19 - TSS region transcription start site region 136639
Cpgi7789 15 101924165 to 101924651 486 CpG island CpG island 7789
Tssr136640 15 101924725 to 101924742 17 - TSS region transcription start site region 136640
Tssr136641 15 101929276 to 101929281 5 - TSS region transcription start site region 136641
Krt79 15 101929332 to 101940324 10992 - protein coding gene keratin 79
Mdq17 15 101937324 to 101937324 0 QTL mammary ductal QTL 17
Tssr136642 15 101938663 to 101938696 33 - TSS region transcription start site region 136642
Tssr133311 15 101939162 to 101939178 16 + TSS region transcription start site region 133311
Tssr136643 15 101940255 to 101940268 13 - TSS region transcription start site region 136643
Tssr136644 15 101940427 to 101940434 7 - TSS region transcription start site region 136644