Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:101574953-102626102

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416 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(15Krt80-Krt18)1Tmm 15 101348315 to 102032026 683711 chromosomal deletion deletion, Chr 15, Thomas M Magin 1
Gm5476 15 101587334 to 101588543 1209 - pseudogene predicted gene 5476
Cpgi7784 15 101588176 to 101588330 154 CpG island CpG island 7784
Gm5477 15 101608874 to 101610479 1605 + pseudogene predicted gene 5477
Gm49426 15 101615297 to 101615407 110 - pseudogene predicted gene, 49426
Gm5414 15 101624028 to 101628188 4160 - protein coding gene predicted gene 5414
Tssr136581 15 101628248 to 101628252 4 - TSS region transcription start site region 136581
Gm17851 15 101638681 to 101639998 1317 + pseudogene predicted gene, 17851
Gm5478 15 101643020 to 101647380 4360 - pseudogene predicted pseudogene 5478
Gm44479 15 101645144 to 101645259 115 + miRNA gene predicted gene, 44479
Krt6b 15 101676023 to 101680287 4264 - protein coding gene keratin 6B
Tssr136582 15 101676085 to 101676103 18 - TSS region transcription start site region 136582
Tssr136583 15 101676280 to 101676288 8 - TSS region transcription start site region 136583
Tssr136584 15 101676447 to 101676466 19 - TSS region transcription start site region 136584
Tssr133303 15 101676532 to 101676543 11 + TSS region transcription start site region 133303
Gm44383 15 101678032 to 101678160 128 + miRNA gene predicted gene, 44383
Tssr136585 15 101680281 to 101680298 17 - TSS region transcription start site region 136585
Krt6a 15 101689928 to 101694305 4377 - protein coding gene keratin 6A
Tssr136586 15 101689956 to 101689989 33 - TSS region transcription start site region 136586
Tssr136587 15 101690204 to 101690212 8 - TSS region transcription start site region 136587
Gm49428 15 101690309 to 101691941 1632 + antisense lncRNA gene predicted gene, 49428
Tssr136588 15 101690378 to 101690392 14 - TSS region transcription start site region 136588
Tssr133304 15 101690463 to 101690482 19 + TSS region transcription start site region 133304
Tssr136589 15 101690500 to 101690501 1 - TSS region transcription start site region 136589
Tssr136590 15 101690508 to 101690514 6 - TSS region transcription start site region 136590
Gm44342 15 101692211 to 101692339 128 + miRNA gene predicted gene, 44342
Tssr136591 15 101692567 to 101692575 8 - TSS region transcription start site region 136591
Tssr136592 15 101693846 to 101693880 34 - TSS region transcription start site region 136592
Tssr136593 15 101694299 to 101694318 19 - TSS region transcription start site region 136593
Krt5 15 101707070 to 101712891 5821 - protein coding gene keratin 5
Tssr136594 15 101707427 to 101707445 18 - TSS region transcription start site region 136594
Tssr136595 15 101707549 to 101707563 14 - TSS region transcription start site region 136595
Tssr136596 15 101707581 to 101707593 12 - TSS region transcription start site region 136596
Tssr136597 15 101709613 to 101709627 14 - TSS region transcription start site region 136597
Tssr136598 15 101709648 to 101709663 15 - TSS region transcription start site region 136598
Tssr136599 15 101709716 to 101709753 37 - TSS region transcription start site region 136599
Tssr136600 15 101709837 to 101709856 19 - TSS region transcription start site region 136600
Gm44323 15 101710274 to 101710402 128 + miRNA gene predicted gene, 44323
Tssr133305 15 101711594 to 101711607 13 + TSS region transcription start site region 133305
Tssr136601 15 101712637 to 101712649 12 - TSS region transcription start site region 136601
Tssr136602 15 101712897 to 101712911 14 - TSS region transcription start site region 136602
Krt71 15 101733949 to 101743097 9148 - protein coding gene keratin 71
Tssr136603 15 101734306 to 101734313 7 - TSS region transcription start site region 136603
Tssr136604 15 101734403 to 101734412 9 - TSS region transcription start site region 136604
Tssr136605 15 101734414 to 101734419 5 - TSS region transcription start site region 136605
Tssr136606 15 101734485 to 101734495 10 - TSS region transcription start site region 136606
Tssr133306 15 101740232 to 101740238 6 + TSS region transcription start site region 133306
Tssr4731 15 101740240 to 101740249 9 + TSS region transcription start site region 4731
Tssr136607 15 101740352 to 101740362 10 - TSS region transcription start site region 136607
Tssr136608 15 101742918 to 101742929 11 - TSS region transcription start site region 136608
Tssr4732 15 101743031 to 101743040 9 - TSS region transcription start site region 4732
Tssr136609 15 101743099 to 101743117 18 - TSS region transcription start site region 136609
Tssr4733 15 101743127 to 101743145 18 - TSS region transcription start site region 4733
Krt74 15 101754259 to 101763504 9245 - pseudogene keratin 74
Tssr136610 15 101763557 to 101763566 9 - TSS region transcription start site region 136610
Krt72 15 101776560 to 101786458 9898 - protein coding gene keratin 72
Cpgi7785 15 101786133 to 101786538 405 CpG island CpG island 7785
Tssr136611 15 101786515 to 101786528 13 - TSS region transcription start site region 136611
Tssr136612 15 101786554 to 101786568 14 - TSS region transcription start site region 136612
Krt73 15 101793308 to 101802332 9024 - protein coding gene keratin 73
Tssr136613 15 101802350 to 101802367 17 - TSS region transcription start site region 136613
Krt2 15 101810689 to 101818169 7480 - protein coding gene keratin 2
Cpgi7786 15 101817663 to 101818072 409 CpG island CpG island 7786
Tssr136614 15 101818165 to 101818170 5 - TSS region transcription start site region 136614
Gm35972 15 101826246 to 101827656 1410 - lncRNA gene predicted gene, 35972
Krt1 15 101845426 to 101850786 5360 - protein coding gene keratin 1
Tssr136615 15 101845469 to 101845487 18 - TSS region transcription start site region 136615
Tssr136616 15 101845660 to 101845671 11 - TSS region transcription start site region 136616
Tssr136617 15 101845761 to 101845772 11 - TSS region transcription start site region 136617
Tssr136618 15 101845887 to 101845899 12 - TSS region transcription start site region 136618
Cpgi7787 15 101845914 to 101846447 533 CpG island CpG island 7787
Tssr136619 15 101845933 to 101845953 20 - TSS region transcription start site region 136619
Tssr136620 15 101845954 to 101845997 43 - TSS region transcription start site region 136620
Tssr136621 15 101846034 to 101846046 12 - TSS region transcription start site region 136621
Tssr136622 15 101846274 to 101846285 11 - TSS region transcription start site region 136622
Tssr136623 15 101846391 to 101846410 19 - TSS region transcription start site region 136623
Tssr136624 15 101846411 to 101846422 11 - TSS region transcription start site region 136624
Tssr136625 15 101846850 to 101846870 20 - TSS region transcription start site region 136625
Tssr136626 15 101846879 to 101846904 25 - TSS region transcription start site region 136626
Tssr136627 15 101846993 to 101847002 9 - TSS region transcription start site region 136627
Tssr136628 15 101848131 to 101848160 29 - TSS region transcription start site region 136628
Tssr136629 15 101849049 to 101849060 11 - TSS region transcription start site region 136629
Tssr136630 15 101849073 to 101849114 41 - TSS region transcription start site region 136630
Tssr136631 15 101849118 to 101849132 14 - TSS region transcription start site region 136631
Tssr133307 15 101850123 to 101850134 11 + TSS region transcription start site region 133307
Tssr133308 15 101850143 to 101850164 21 + TSS region transcription start site region 133308
Tssr133309 15 101850341 to 101850352 11 + TSS region transcription start site region 133309
Tssr136632 15 101850778 to 101850792 14 - TSS region transcription start site region 136632
Tssr136633 15 101851980 to 101851984 4 - TSS region transcription start site region 136633
Tssr133310 15 101854753 to 101854759 6 + TSS region transcription start site region 133310
Tssr4734 15 101858033 to 101858040 7 + TSS region transcription start site region 4734
Krt77 15 101858731 to 101869705 10974 - protein coding gene keratin 77
Cpgi7788 15 101859524 to 101860422 898 CpG island CpG island 7788
Tssr136634 15 101869695 to 101869712 17 - TSS region transcription start site region 136634
Tssr136635 15 101869802 to 101869810 8 - TSS region transcription start site region 136635
Krt76 15 101884351 to 101892920 8569 - protein coding gene keratin 76
Gm44356 15 101888397 to 101888507 110 + miRNA gene predicted gene, 44356
Tssr136636 15 101892916 to 101892921 5 - TSS region transcription start site region 136636
Gm49434 15 101906924 to 101910149 3225 - pseudogene predicted gene, 49434
Krt4 15 101918535 to 101924735 6200 - protein coding gene keratin 4
Tssr136637 15 101918568 to 101918578 10 - TSS region transcription start site region 136637
Tssr136638 15 101918579 to 101918590 11 - TSS region transcription start site region 136638
Tssr136639 15 101918800 to 101918819 19 - TSS region transcription start site region 136639
Cpgi7789 15 101924165 to 101924651 486 CpG island CpG island 7789
Tssr136640 15 101924725 to 101924742 17 - TSS region transcription start site region 136640
Tssr136641 15 101929276 to 101929281 5 - TSS region transcription start site region 136641
Krt79 15 101929332 to 101940324 10992 - protein coding gene keratin 79
Mdq17 15 101937324 to 101937324 0 QTL mammary ductal QTL 17
Tssr136642 15 101938663 to 101938696 33 - TSS region transcription start site region 136642
Tssr133311 15 101939162 to 101939178 16 + TSS region transcription start site region 133311
Tssr136643 15 101940255 to 101940268 13 - TSS region transcription start site region 136643
Tssr136644 15 101940427 to 101940434 7 - TSS region transcription start site region 136644
Krt78 15 101946001 to 101954287 8286 - protein coding gene keratin 78
Tssr136645 15 101954249 to 101954265 16 - TSS region transcription start site region 136645
Tssr136646 15 101954276 to 101954294 18 - TSS region transcription start site region 136646
Cpgi7790 15 101977016 to 101977879 863 CpG island CpG island 7790
D15Ertd430e 15 101982836 to 101983051 215 DNA segment DNA segment, Chr 15, ERATO Doi 430, expressed
Cpgi7791 15 101983078 to 101983468 390 CpG island CpG island 7791
Krt8 15 101996711 to 102004342 7631 - protein coding gene keratin 8
Tssr133312 15 101999486 to 101999493 7 + TSS region transcription start site region 133312
Cpgi7792 15 102002934 to 102003414 480 CpG island CpG island 7792
Cpgi7793 15 102003825 to 102004339 514 CpG island CpG island 7793
Tssr136647 15 102004305 to 102004321 16 - TSS region transcription start site region 136647
Gm36026 15 102006143 to 102009445 3302 + lincRNA gene predicted gene, 36026
Tssr4735 15 102009124 to 102009143 19 - TSS region transcription start site region 4735
Gm41404 15 102010591 to 102017249 6658 - lncRNA gene predicted gene, 41404
Cpgi7794 15 102027914 to 102028472 558 CpG island CpG island 7794
Tssr133313 15 102028200 to 102028211 11 + TSS region transcription start site region 133313
Krt18 15 102028216 to 102032026 3810 + protein coding gene keratin 18
Tssr133314 15 102028218 to 102028235 17 + TSS region transcription start site region 133314
D15Mit40 15 102029302 to 102029441 139 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 40
Tssr133315 15 102029881 to 102029893 12 + TSS region transcription start site region 133315
Gm41405 15 102045318 to 102047265 1947 + lncRNA gene predicted gene, 41405
Cpgi7795 15 102052098 to 102052498 400 CpG island CpG island 7795
Cpgi7796 15 102065751 to 102066003 252 CpG island CpG island 7796
Cpgi7797 15 102073535 to 102074828 1293 CpG island CpG island 7797
Tssr136648 15 102073589 to 102073611 22 - TSS region transcription start site region 136648
Tssr133316 15 102073639 to 102073642 3 + TSS region transcription start site region 133316
Tssr133317 15 102073644 to 102073654 10 + TSS region transcription start site region 133317
Eif4b 15 102073773 to 102097173 23400 + protein coding gene eukaryotic translation initiation factor 4B
Tssr133318 15 102073891 to 102073903 12 + TSS region transcription start site region 133318
Tssr133319 15 102073915 to 102073934 19 + TSS region transcription start site region 133319
Gm9693 15 102074153 to 102075968 1815 unclassified gene predicted gene 9693
Tssr133320 15 102074189 to 102074201 12 + TSS region transcription start site region 133320
A030007N12Rik 15 102077423 to 102080223 2800 unclassified non-coding RNA gene RIKEN cDNA A030007N12 gene
Tssr133321 15 102089969 to 102089988 19 + TSS region transcription start site region 133321
Tssr133322 15 102095306 to 102095321 15 + TSS region transcription start site region 133322
Tssr133323 15 102098443 to 102098498 55 + TSS region transcription start site region 133323
Cpgi7798 15 102099953 to 102101102 1149 CpG island CpG island 7798
Tssr133324 15 102100365 to 102100384 19 + TSS region transcription start site region 133324
Tssr133325 15 102100394 to 102100423 29 + TSS region transcription start site region 133325
Tns2 15 102100413 to 102116401 15988 + protein coding gene tensin 2
Tssr133326 15 102102198 to 102102242 44 + TSS region transcription start site region 133326
Tssr133327 15 102102926 to 102102975 49 + TSS region transcription start site region 133327
Tssr4736 15 102102980 to 102102985 5 + TSS region transcription start site region 4736
Tssr133328 15 102103076 to 102103083 7 + TSS region transcription start site region 133328
Tssr133329 15 102104347 to 102104358 11 + TSS region transcription start site region 133329
Tssr133330 15 102104361 to 102104373 12 + TSS region transcription start site region 133330
Tssr133331 15 102104376 to 102104388 12 + TSS region transcription start site region 133331
Tssr133332 15 102104389 to 102104418 29 + TSS region transcription start site region 133332
Tssr133333 15 102104506 to 102104520 14 + TSS region transcription start site region 133333
Tssr133334 15 102104530 to 102104539 9 + TSS region transcription start site region 133334
Tssr133335 15 102104588 to 102104601 13 + TSS region transcription start site region 133335
Tssr133336 15 102106150 to 102106163 13 + TSS region transcription start site region 133336
Cpgi7799 15 102106598 to 102107392 794 CpG island CpG island 7799
Tssr133337 15 102113025 to 102113061 36 + TSS region transcription start site region 133337
Spryd3 15 102116528 to 102136234 19706 - protein coding gene SPRY domain containing 3
Tssr136649 15 102118946 to 102118975 29 - TSS region transcription start site region 136649
Tssr133338 15 102119074 to 102119093 19 + TSS region transcription start site region 133338
Cpgi7800 15 102135720 to 102136683 963 CpG island CpG island 7800
Tssr136650 15 102136177 to 102136222 45 - TSS region transcription start site region 136650
Tssr136651 15 102136225 to 102136230 5 - TSS region transcription start site region 136651
Tssr133339 15 102136265 to 102136271 6 + TSS region transcription start site region 133339
Igfbp6 15 102144362 to 102149511 5149 + protein coding gene insulin-like growth factor binding protein 6
Tssr133340 15 102144467 to 102144486 19 + TSS region transcription start site region 133340
Tssr133341 15 102144496 to 102144514 18 + TSS region transcription start site region 133341
Cpgi7801 15 102144499 to 102144920 421 CpG island CpG island 7801
Tssr133342 15 102144689 to 102144698 9 + TSS region transcription start site region 133342
Tssr133343 15 102144715 to 102144727 12 + TSS region transcription start site region 133343
Tssr133344 15 102147875 to 102147901 26 + TSS region transcription start site region 133344
Tssr133345 15 102150361 to 102150376 15 + TSS region transcription start site region 133345
Tssr133346 15 102150382 to 102150393 11 + TSS region transcription start site region 133346
Tssr133347 15 102150405 to 102150418 13 + TSS region transcription start site region 133347
Tssr133348 15 102150502 to 102150577 75 + TSS region transcription start site region 133348
Soat2 15 102150526 to 102163469 12943 + protein coding gene sterol O-acyltransferase 2
Tssr4737 15 102150578 to 102150581 3 + TSS region transcription start site region 4737
Tssr133349 15 102150590 to 102150601 11 + TSS region transcription start site region 133349
Tssr133350 15 102151046 to 102151059 13 + TSS region transcription start site region 133350
Tssr133351 15 102151078 to 102151098 20 + TSS region transcription start site region 133351
Tssr133352 15 102151108 to 102151124 16 + TSS region transcription start site region 133352
Cpgi7802 15 102156856 to 102157223 367 CpG island CpG island 7802
Cpgi7803 15 102160459 to 102160701 242 CpG island CpG island 7803
D15Mit246 15 102165961 to 102166079 118 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 246
Csad 15 102176999 to 102204724 27725 - protein coding gene cysteine sulfinic acid decarboxylase
Tssr133353 15 102177318 to 102177321 3 + TSS region transcription start site region 133353
Tssr136652 15 102188934 to 102188951 17 - TSS region transcription start site region 136652
Tssr136653 15 102188952 to 102188971 19 - TSS region transcription start site region 136653
Tssr136654 15 102188983 to 102188996 13 - TSS region transcription start site region 136654
Tssr136655 15 102189005 to 102189030 25 - TSS region transcription start site region 136655
Tssr136656 15 102189032 to 102189050 18 - TSS region transcription start site region 136656