Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:101217549-102197563

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417 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
A330009N23Rik 15 101221195 to 101225186 3991 - antisense lncRNA gene RIKEN cDNA A330009N23 gene
AU021063 15 101221247 to 101222155 908 + lincRNA gene expressed sequence AU021063
Cpgi7771 15 101223966 to 101225218 1252 CpG island CpG island 7771
Grasp 15 101224207 to 101232756 8549 + protein coding gene GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein
Tssr133196 15 101224217 to 101224231 14 + TSS region transcription start site region 133196
Tssr133197 15 101224322 to 101224338 16 + TSS region transcription start site region 133197
Tssr136522 15 101224625 to 101224638 13 - TSS region transcription start site region 136522
Tssr136523 15 101225135 to 101225158 23 - TSS region transcription start site region 136523
Tssr136524 15 101225163 to 101225178 15 - TSS region transcription start site region 136524
Tssr4725 15 101228319 to 101228344 25 + TSS region transcription start site region 4725
Cpgi7772 15 101230540 to 101230761 221 CpG island CpG island 7772
Cpgi7773 15 101231110 to 101232152 1042 CpG island CpG island 7773
Tssr133198 15 101232204 to 101232208 4 + TSS region transcription start site region 133198
Tssr133199 15 101232403 to 101232433 30 + TSS region transcription start site region 133199
Cpgi7774 15 101239085 to 101239421 336 CpG island CpG island 7774
Tssr4726 15 101244175 to 101244177 2 + TSS region transcription start site region 4726
Cpgi7775 15 101246209 to 101246808 599 CpG island CpG island 7775
Tssr133200 15 101246572 to 101246587 15 + TSS region transcription start site region 133200
Tssr136525 15 101247191 to 101247221 30 - TSS region transcription start site region 136525
Tssr133201 15 101247401 to 101247412 11 + TSS region transcription start site region 133201
Tssr136526 15 101248141 to 101248144 3 - TSS region transcription start site region 136526
Tssr4727 15 101248270 to 101248283 13 + TSS region transcription start site region 4727
Tssr136527 15 101248717 to 101248726 9 - TSS region transcription start site region 136527
Tssr136528 15 101250266 to 101250275 9 - TSS region transcription start site region 136528
Tssr136529 15 101250363 to 101250396 33 - TSS region transcription start site region 136529
Cpgi7776 15 101253689 to 101254940 1251 CpG island CpG island 7776
Tssr136530 15 101253697 to 101253705 8 - TSS region transcription start site region 136530
Tssr136531 15 101253722 to 101253740 18 - TSS region transcription start site region 136531
Tssr136532 15 101253776 to 101253808 32 - TSS region transcription start site region 136532
Tssr136533 15 101253966 to 101253998 32 - TSS region transcription start site region 136533
Tssr133202 15 101254200 to 101254329 129 + TSS region transcription start site region 133202
Nr4a1 15 101254269 to 101274795 20526 + protein coding gene nuclear receptor subfamily 4, group A, member 1
Tssr133203 15 101254486 to 101254497 11 + TSS region transcription start site region 133203
Tssr133204 15 101254511 to 101254518 7 + TSS region transcription start site region 133204
Tssr136534 15 101256001 to 101256006 5 - TSS region transcription start site region 136534
Tssr136535 15 101256030 to 101256039 9 - TSS region transcription start site region 136535
Tssr136536 15 101256049 to 101256058 9 - TSS region transcription start site region 136536
Tssr136537 15 101256171 to 101256180 9 - TSS region transcription start site region 136537
Tssr136538 15 101256229 to 101256240 11 - TSS region transcription start site region 136538
Tssr133205 15 101256385 to 101256393 8 + TSS region transcription start site region 133205
Tssr133206 15 101256400 to 101256418 18 + TSS region transcription start site region 133206
Tssr136539 15 101256916 to 101256931 15 - TSS region transcription start site region 136539
Tssr133207 15 101257235 to 101257252 17 + TSS region transcription start site region 133207
Tssr133208 15 101258396 to 101258402 6 + TSS region transcription start site region 133208
Tssr136540 15 101258416 to 101258426 10 - TSS region transcription start site region 136540
Tssr133209 15 101258679 to 101258700 21 + TSS region transcription start site region 133209
Tssr133210 15 101260427 to 101260455 28 + TSS region transcription start site region 133210
Tssr133211 15 101260666 to 101260684 18 + TSS region transcription start site region 133211
Tssr133212 15 101260693 to 101260709 16 + TSS region transcription start site region 133212
Tssr136541 15 101261361 to 101261370 9 - TSS region transcription start site region 136541
Tssr136542 15 101261549 to 101261562 13 - TSS region transcription start site region 136542
Tssr133213 15 101261690 to 101261705 15 + TSS region transcription start site region 133213
Cpgi7777 15 101266103 to 101267248 1145 CpG island CpG island 7777
Tssr136543 15 101266520 to 101266529 9 - TSS region transcription start site region 136543
Tssr136544 15 101266533 to 101266564 31 - TSS region transcription start site region 136544
Tssr133214 15 101266839 to 101266859 20 + TSS region transcription start site region 133214
Tssr133215 15 101267100 to 101267112 12 + TSS region transcription start site region 133215
Tssr133216 15 101267128 to 101267143 15 + TSS region transcription start site region 133216
Tssr133217 15 101267245 to 101267246 1 + TSS region transcription start site region 133217
Tssr133218 15 101267854 to 101267874 20 + TSS region transcription start site region 133218
Tssr133219 15 101267875 to 101267896 21 + TSS region transcription start site region 133219
Tssr133220 15 101267984 to 101267991 7 + TSS region transcription start site region 133220
Tssr133221 15 101268027 to 101268051 24 + TSS region transcription start site region 133221
Tssr133222 15 101269387 to 101269416 29 + TSS region transcription start site region 133222
Tssr133223 15 101270076 to 101270106 30 + TSS region transcription start site region 133223
Tssr133224 15 101270119 to 101270124 5 + TSS region transcription start site region 133224
Tssr133225 15 101270130 to 101270140 10 + TSS region transcription start site region 133225
Tssr133226 15 101270151 to 101270158 7 + TSS region transcription start site region 133226
Tssr133227 15 101270159 to 101270171 12 + TSS region transcription start site region 133227
Tssr133228 15 101270177 to 101270187 10 + TSS region transcription start site region 133228
Tssr133229 15 101270188 to 101270225 37 + TSS region transcription start site region 133229
Tssr133230 15 101270266 to 101270284 18 + TSS region transcription start site region 133230
Tssr133231 15 101270298 to 101270310 12 + TSS region transcription start site region 133231
Tssr136545 15 101270299 to 101270310 11 - TSS region transcription start site region 136545
Tssr133232 15 101270317 to 101270337 20 + TSS region transcription start site region 133232
Tssr133233 15 101270345 to 101270358 13 + TSS region transcription start site region 133233
Tssr133234 15 101270363 to 101270384 21 + TSS region transcription start site region 133234
Tssr133235 15 101270396 to 101270426 30 + TSS region transcription start site region 133235
Tssr136546 15 101270421 to 101270431 10 - TSS region transcription start site region 136546
Tssr133236 15 101270445 to 101270465 20 + TSS region transcription start site region 133236
Tssr133237 15 101270467 to 101270496 29 + TSS region transcription start site region 133237
Tssr136547 15 101270497 to 101270506 9 - TSS region transcription start site region 136547
Tssr133238 15 101270500 to 101270514 14 + TSS region transcription start site region 133238
Tssr136548 15 101270507 to 101270523 16 - TSS region transcription start site region 136548
Tssr136549 15 101270541 to 101270548 7 - TSS region transcription start site region 136549
Tssr133239 15 101270542 to 101270577 35 + TSS region transcription start site region 133239
Tssr133240 15 101270634 to 101270645 11 + TSS region transcription start site region 133240
Tssr136550 15 101270647 to 101270664 17 - TSS region transcription start site region 136550
Tssr133241 15 101270651 to 101270654 3 + TSS region transcription start site region 133241
Tssr133242 15 101270659 to 101270666 7 + TSS region transcription start site region 133242
Tssr133243 15 101270685 to 101270687 2 + TSS region transcription start site region 133243
Tssr133244 15 101270706 to 101270717 11 + TSS region transcription start site region 133244
Tssr136551 15 101270723 to 101270769 46 - TSS region transcription start site region 136551
Tssr133245 15 101270750 to 101270763 13 + TSS region transcription start site region 133245
Tssr133246 15 101270775 to 101270793 18 + TSS region transcription start site region 133246
Tssr133247 15 101270863 to 101270874 11 + TSS region transcription start site region 133247
Tssr133248 15 101270883 to 101270892 9 + TSS region transcription start site region 133248
Tssr133249 15 101271734 to 101271749 15 + TSS region transcription start site region 133249
Tssr133250 15 101271768 to 101271779 11 + TSS region transcription start site region 133250
Tssr133251 15 101271799 to 101271813 14 + TSS region transcription start site region 133251
Tssr133252 15 101272146 to 101272156 10 + TSS region transcription start site region 133252
Tssr133253 15 101272157 to 101272166 9 + TSS region transcription start site region 133253
Tssr133254 15 101272177 to 101272202 25 + TSS region transcription start site region 133254
Tssr133255 15 101272210 to 101272234 24 + TSS region transcription start site region 133255
Tssr133256 15 101272251 to 101272264 13 + TSS region transcription start site region 133256
Tssr133257 15 101272269 to 101272277 8 + TSS region transcription start site region 133257
Tssr133258 15 101272721 to 101272736 15 + TSS region transcription start site region 133258
Tssr133259 15 101272738 to 101272743 5 + TSS region transcription start site region 133259
Tssr133260 15 101272756 to 101272763 7 + TSS region transcription start site region 133260
Tssr133261 15 101272766 to 101272773 7 + TSS region transcription start site region 133261
Tssr133262 15 101272777 to 101272785 8 + TSS region transcription start site region 133262
Tssr133263 15 101272798 to 101272809 11 + TSS region transcription start site region 133263
Tssr133264 15 101272817 to 101272826 9 + TSS region transcription start site region 133264
Tssr133265 15 101273026 to 101273039 13 + TSS region transcription start site region 133265
Tssr133266 15 101273051 to 101273058 7 + TSS region transcription start site region 133266
Tssr133267 15 101273092 to 101273100 8 + TSS region transcription start site region 133267
Tssr133268 15 101273139 to 101273157 18 + TSS region transcription start site region 133268
Tssr133269 15 101273311 to 101273316 5 + TSS region transcription start site region 133269
Tssr133270 15 101273973 to 101273983 10 + TSS region transcription start site region 133270
Tssr133271 15 101274022 to 101274033 11 + TSS region transcription start site region 133271
Tssr133272 15 101274082 to 101274087 5 + TSS region transcription start site region 133272
Tssr133273 15 101274121 to 101274131 10 + TSS region transcription start site region 133273
Tssr133274 15 101274188 to 101274199 11 + TSS region transcription start site region 133274
Tssr136552 15 101274371 to 101274381 10 - TSS region transcription start site region 136552
Tssr133275 15 101274438 to 101274447 9 + TSS region transcription start site region 133275
Tssr133276 15 101274600 to 101274610 10 + TSS region transcription start site region 133276
Tssr133277 15 101274682 to 101274689 7 + TSS region transcription start site region 133277
Tssr136553 15 101274785 to 101274791 6 - TSS region transcription start site region 136553
Cpgi7778 15 101283714 to 101284594 880 CpG island CpG island 7778
Tssr4728 15 101284176 to 101284178 2 + TSS region transcription start site region 4728
Tssr133278 15 101284280 to 101284308 28 + TSS region transcription start site region 133278
Atg101 15 101284301 to 101290947 6646 + protein coding gene autophagy related 101
Tssr133279 15 101286614 to 101286625 11 + TSS region transcription start site region 133279
Tssr133280 15 101293196 to 101293209 13 + TSS region transcription start site region 133280
Smim41 15 101293212 to 101297426 4214 + lincRNA gene small integral membrane protein 41
Tssr133281 15 101293218 to 101293237 19 + TSS region transcription start site region 133281
Tssr133282 15 101293466 to 101293480 14 + TSS region transcription start site region 133282
Gm41403 15 101297425 to 101298609 1184 - lncRNA gene predicted gene, 41403
Tssr133283 15 101316097 to 101316110 13 + TSS region transcription start site region 133283
Gm49499 15 101316102 to 101318538 2436 + unclassified gene predicted gene, 49499
Tssr133284 15 101322883 to 101322916 33 + TSS region transcription start site region 133284
Del(15Krt80-Krt18)1Tmm 15 101348315 to 102032026 683711 chromosomal deletion deletion, Chr 15, Thomas M Magin 1
Krt80 15 101348315 to 101370125 21810 - protein coding gene keratin 80
Tssr136554 15 101349447 to 101349452 5 - TSS region transcription start site region 136554
D15Mit173 15 101350617 to 101350765 148 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 173
Tssr136555 15 101351274 to 101351283 9 - TSS region transcription start site region 136555
Gm35853 15 101358708 to 101405857 47149 + antisense lncRNA gene predicted gene, 35853
Tssr136556 15 101364531 to 101364566 35 - TSS region transcription start site region 136556
Tssr136557 15 101364572 to 101364585 13 - TSS region transcription start site region 136557
Tssr136558 15 101364589 to 101364619 30 - TSS region transcription start site region 136558
Tssr133285 15 101364762 to 101364768 6 + TSS region transcription start site region 133285
Mir1941 15 101369352 to 101369434 82 + miRNA gene microRNA 1941
Tssr136559 15 101370156 to 101370169 13 - TSS region transcription start site region 136559
Tssr133286 15 101373326 to 101373335 9 + TSS region transcription start site region 133286
Tssr133287 15 101373339 to 101373358 19 + TSS region transcription start site region 133287
Tssr133288 15 101373645 to 101373679 34 + TSS region transcription start site region 133288
Tssr136560 15 101373732 to 101373733 1 - TSS region transcription start site region 136560
Tssr136561 15 101374994 to 101375009 15 - TSS region transcription start site region 136561
Gm671 15 101395427 to 101412311 16884 - antisense lncRNA gene predicted gene 671
Gm49500 15 101404052 to 101404433 381 - pseudogene predicted gene, 49500
Tssr136562 15 101406676 to 101406681 5 - TSS region transcription start site region 136562
Tssr133289 15 101411053 to 101411095 42 + TSS region transcription start site region 133289
Tssr133290 15 101411120 to 101411138 18 + TSS region transcription start site region 133290
Cpgi7779 15 101412217 to 101412863 646 CpG island CpG island 7779
Tssr136563 15 101412286 to 101412312 26 - TSS region transcription start site region 136563
Krt7 15 101412403 to 101427806 15403 + protein coding gene keratin 7
Tssr133291 15 101412417 to 101412433 16 + TSS region transcription start site region 133291
Tssr133292 15 101415107 to 101415150 43 + TSS region transcription start site region 133292
Tssr136564 15 101418348 to 101418367 19 - TSS region transcription start site region 136564
Tssr136565 15 101418371 to 101418397 26 - TSS region transcription start site region 136565
Tssr133293 15 101419612 to 101419624 12 + TSS region transcription start site region 133293
Tssr133294 15 101420505 to 101420518 13 + TSS region transcription start site region 133294
Tssr133295 15 101427610 to 101427621 11 + TSS region transcription start site region 133295
Tssr133296 15 101427689 to 101427708 19 + TSS region transcription start site region 133296
Tssr136566 15 101427784 to 101427807 23 - TSS region transcription start site region 136566
Krt87 15 101431490 to 101438804 7314 - protein coding gene keratin 87
Cpgi7780 15 101438362 to 101439176 814 CpG island CpG island 7780
Tssr136567 15 101438788 to 101438804 16 - TSS region transcription start site region 136567
Krt88 15 101447744 to 101453907 6163 + protein coding gene keratin 88
Tssr133297 15 101447759 to 101447760 1 + TSS region transcription start site region 133297
Tssr133298 15 101447762 to 101447804 42 + TSS region transcription start site region 133298
Tssr133299 15 101447805 to 101447814 9 + TSS region transcription start site region 133299
Krt81 15 101459061 to 101463751 4690 - protein coding gene keratin 81
Tssr136568 15 101463758 to 101463770 12 - TSS region transcription start site region 136568
Tssr4729 15 101469372 to 101469381 9 + TSS region transcription start site region 4729
Tssr133300 15 101469396 to 101469411 15 + TSS region transcription start site region 133300
Tssr133301 15 101469443 to 101469452 9 + TSS region transcription start site region 133301
Tssr133302 15 101473472 to 101473478 6 + TSS region transcription start site region 133302
Krt86 15 101473478 to 101479983 6505 + protein coding gene keratin 86
Cpgi7781 15 101479175 to 101479661 486 CpG island CpG island 7781
Gm49501 15 101480296 to 101483312 3016 + lincRNA gene predicted gene, 49501
Krt83 15 101485130 to 101491512 6382 - protein coding gene keratin 83
Tssr4730 15 101485192 to 101485233 41 + TSS region transcription start site region 4730
Tssr136569 15 101488095 to 101488112 17 - TSS region transcription start site region 136569
Tssr136570 15 101488113 to 101488121 8 - TSS region transcription start site region 136570
Tssr136571 15 101488211 to 101488220 9 - TSS region transcription start site region 136571
Tssr136572 15 101488295 to 101488313 18 - TSS region transcription start site region 136572
Tssr136573 15 101491509 to 101491514 5 - TSS region transcription start site region 136573
Gm49423 15 101503715 to 101503901 186 + pseudogene predicted gene, 49423
Gm6042 15 101503816 to 101506313 2497 + pseudogene predicted gene 6042