Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 15:101124125-101262601

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71 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acvrl1 15 101128522 to 101145336 16814 + protein coding gene activin A receptor, type II-like 1
Tssr133187 15 101128525 to 101128536 11 + TSS region transcription start site region 133187
Tssr133188 15 101128544 to 101128562 18 + TSS region transcription start site region 133188
Tssr133189 15 101128574 to 101128587 13 + TSS region transcription start site region 133189
Cpgi7767 15 101128603 to 101129274 671 CpG island CpG island 7767
Tssr133190 15 101128927 to 101128948 21 + TSS region transcription start site region 133190
Gm16031 15 101129916 to 101131592 1676 - lncRNA gene predicted gene 16031
Tssr133191 15 101134584 to 101134592 8 + TSS region transcription start site region 133191
Tssr133192 15 101134598 to 101134630 32 + TSS region transcription start site region 133192
Tssr133193 15 101134636 to 101134664 28 + TSS region transcription start site region 133193
Cpgi7768 15 101136964 to 101137602 638 CpG island CpG island 7768
Cpgi7769 15 101145430 to 101145809 379 CpG island CpG island 7769
Cpgi7770 15 101173511 to 101174999 1488 CpG island CpG island 7770
Acvr1b 15 101174072 to 101213684 39612 + protein coding gene activin A receptor, type 1B
Tssr133194 15 101174096 to 101174148 52 + TSS region transcription start site region 133194
Tssr133195 15 101186362 to 101186404 42 + TSS region transcription start site region 133195
Mir6962 15 101193869 to 101193931 62 + miRNA gene microRNA 6962
Tssr136520 15 101215683 to 101215687 4 - TSS region transcription start site region 136520
Tssr136521 15 101217270 to 101217278 8 - TSS region transcription start site region 136521
A330009N23Rik 15 101221195 to 101225186 3991 - lncRNA gene RIKEN cDNA A330009N23 gene
AU021063 15 101221247 to 101222155 908 + lncRNA gene expressed sequence AU021063
Cpgi7771 15 101223966 to 101225218 1252 CpG island CpG island 7771
Grasp 15 101224207 to 101232756 8549 + protein coding gene GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein
Tssr133196 15 101224217 to 101224231 14 + TSS region transcription start site region 133196
Tssr133197 15 101224322 to 101224338 16 + TSS region transcription start site region 133197
Tssr136522 15 101224625 to 101224638 13 - TSS region transcription start site region 136522
Tssr136523 15 101225135 to 101225158 23 - TSS region transcription start site region 136523
Tssr136524 15 101225163 to 101225178 15 - TSS region transcription start site region 136524
Tssr4725 15 101228319 to 101228344 25 + TSS region transcription start site region 4725
Cpgi7772 15 101230540 to 101230761 221 CpG island CpG island 7772
Cpgi7773 15 101231110 to 101232152 1042 CpG island CpG island 7773
Tssr133198 15 101232204 to 101232208 4 + TSS region transcription start site region 133198
Tssr133199 15 101232403 to 101232433 30 + TSS region transcription start site region 133199
Cpgi7774 15 101239085 to 101239421 336 CpG island CpG island 7774
Tssr4726 15 101244175 to 101244177 2 + TSS region transcription start site region 4726
Cpgi7775 15 101246209 to 101246808 599 CpG island CpG island 7775
Tssr133200 15 101246572 to 101246587 15 + TSS region transcription start site region 133200
Tssr136525 15 101247191 to 101247221 30 - TSS region transcription start site region 136525
Tssr133201 15 101247401 to 101247412 11 + TSS region transcription start site region 133201
Tssr136526 15 101248141 to 101248144 3 - TSS region transcription start site region 136526
Tssr4727 15 101248270 to 101248283 13 + TSS region transcription start site region 4727
Tssr136527 15 101248717 to 101248726 9 - TSS region transcription start site region 136527
Tssr136528 15 101250266 to 101250275 9 - TSS region transcription start site region 136528
Tssr136529 15 101250363 to 101250396 33 - TSS region transcription start site region 136529
Cpgi7776 15 101253689 to 101254940 1251 CpG island CpG island 7776
Tssr136530 15 101253697 to 101253705 8 - TSS region transcription start site region 136530
Tssr136531 15 101253722 to 101253740 18 - TSS region transcription start site region 136531
Tssr136532 15 101253776 to 101253808 32 - TSS region transcription start site region 136532
Tssr136533 15 101253966 to 101253998 32 - TSS region transcription start site region 136533
Tssr133202 15 101254200 to 101254329 129 + TSS region transcription start site region 133202
Nr4a1 15 101254269 to 101274795 20526 + protein coding gene nuclear receptor subfamily 4, group A, member 1
Tssr133203 15 101254486 to 101254497 11 + TSS region transcription start site region 133203
Tssr133204 15 101254511 to 101254518 7 + TSS region transcription start site region 133204
Tssr136534 15 101256001 to 101256006 5 - TSS region transcription start site region 136534
Tssr136535 15 101256030 to 101256039 9 - TSS region transcription start site region 136535
Tssr136536 15 101256049 to 101256058 9 - TSS region transcription start site region 136536
Tssr136537 15 101256171 to 101256180 9 - TSS region transcription start site region 136537
Tssr136538 15 101256229 to 101256240 11 - TSS region transcription start site region 136538
Tssr133205 15 101256385 to 101256393 8 + TSS region transcription start site region 133205
Tssr133206 15 101256400 to 101256418 18 + TSS region transcription start site region 133206
Tssr136539 15 101256916 to 101256931 15 - TSS region transcription start site region 136539
Tssr133207 15 101257235 to 101257252 17 + TSS region transcription start site region 133207
Tssr133208 15 101258396 to 101258402 6 + TSS region transcription start site region 133208
Tssr136540 15 101258416 to 101258426 10 - TSS region transcription start site region 136540
Tssr133209 15 101258679 to 101258700 21 + TSS region transcription start site region 133209
Tssr133210 15 101260427 to 101260455 28 + TSS region transcription start site region 133210
Tssr133211 15 101260666 to 101260684 18 + TSS region transcription start site region 133211
Tssr133212 15 101260693 to 101260709 16 + TSS region transcription start site region 133212
Tssr136541 15 101261361 to 101261370 9 - TSS region transcription start site region 136541
Tssr136542 15 101261549 to 101261562 13 - TSS region transcription start site region 136542
Tssr133213 15 101261690 to 101261705 15 + TSS region transcription start site region 133213