Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:101042987-101153363

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scn8a 15 100869858 to 101045938 176080 + protein coding gene sodium channel, voltage-gated, type VIII, alpha
Cpgi7763 15 101045987 to 101047612 1625 CpG island CpG island 7763
Gm47841 15 101046342 to 101047397 1055 - protein coding gene predicted gene, 47841
Tssr136507 15 101047362 to 101047376 14 - TSS region transcription start site region 136507
Tssr136508 15 101047380 to 101047385 5 - TSS region transcription start site region 136508
Tssr136509 15 101047401 to 101047404 3 - TSS region transcription start site region 136509
Tssr136510 15 101047420 to 101047429 9 - TSS region transcription start site region 136510
Fignl2 15 101050194 to 101078567 28373 - protein coding gene fidgetin-like 2
Cpgi7764 15 101052151 to 101054590 2439 CpG island CpG island 7764
Tssr136511 15 101052178 to 101052206 28 - TSS region transcription start site region 136511
Tssr136512 15 101052251 to 101052264 13 - TSS region transcription start site region 136512
Tssr136513 15 101054325 to 101054344 19 - TSS region transcription start site region 136513
Cpgi7765 15 101077466 to 101079530 2064 CpG island CpG island 7765
Tssr133183 15 101077881 to 101077920 39 + TSS region transcription start site region 133183
Tssr136514 15 101078369 to 101078380 11 - TSS region transcription start site region 136514
Tssr136515 15 101078410 to 101078419 9 - TSS region transcription start site region 136515
Tssr136516 15 101078489 to 101078513 24 - TSS region transcription start site region 136516
Tssr136517 15 101078807 to 101078830 23 - TSS region transcription start site region 136517
Tssr136518 15 101078882 to 101078932 50 - TSS region transcription start site region 136518
Cpgi7766 15 101097987 to 101098363 376 CpG island CpG island 7766
Gm41402 15 101103007 to 101106065 3058 + lncRNA gene predicted gene, 41402
Tssr133184 15 101115738 to 101115753 15 + TSS region transcription start site region 133184
Ankrd33 15 101115755 to 101120040 4285 + protein coding gene ankyrin repeat domain 33
Tssr133185 15 101115773 to 101115786 13 + TSS region transcription start site region 133185
Tssr133186 15 101115796 to 101115805 9 + TSS region transcription start site region 133186
Tssr4724 15 101115823 to 101115831 8 + TSS region transcription start site region 4724
Tssr136519 15 101122335 to 101122339 4 - TSS region transcription start site region 136519
Acvrl1 15 101128522 to 101145336 16814 + protein coding gene activin A receptor, type II-like 1
Tssr133187 15 101128525 to 101128536 11 + TSS region transcription start site region 133187
Tssr133188 15 101128544 to 101128562 18 + TSS region transcription start site region 133188
Tssr133189 15 101128574 to 101128587 13 + TSS region transcription start site region 133189
Cpgi7767 15 101128603 to 101129274 671 CpG island CpG island 7767
Tssr133190 15 101128927 to 101128948 21 + TSS region transcription start site region 133190
Gm16031 15 101129916 to 101131592 1676 - antisense lncRNA gene predicted gene 16031
Tssr133191 15 101134584 to 101134592 8 + TSS region transcription start site region 133191
Tssr133192 15 101134598 to 101134630 32 + TSS region transcription start site region 133192
Tssr133193 15 101134636 to 101134664 28 + TSS region transcription start site region 133193
Cpgi7768 15 101136964 to 101137602 638 CpG island CpG island 7768
Cpgi7769 15 101145430 to 101145809 379 CpG island CpG island 7769