Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:100844858-101070938

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scn8a 15 100869858 to 101045938 176080 + protein coding gene sodium channel, voltage-gated, type VIII, alpha
Cpgi7753 15 100870030 to 100871726 1696 CpG island CpG island 7753
Tssr133172 15 100870627 to 100870667 40 + TSS region transcription start site region 133172
Tssr133173 15 100870670 to 100870702 32 + TSS region transcription start site region 133173
Tssr133174 15 100870895 to 100870909 14 + TSS region transcription start site region 133174
Tssr133175 15 100870926 to 100870961 35 + TSS region transcription start site region 133175
Tssr133176 15 100870978 to 100870989 11 + TSS region transcription start site region 133176
Tssr133177 15 100870997 to 100871008 11 + TSS region transcription start site region 133177
Cpgi7754 15 100873144 to 100873483 339 CpG island CpG island 7754
Cpgi7755 15 100895810 to 100896061 251 CpG island CpG island 7755
Cpgi7756 15 100896558 to 100896828 270 CpG island CpG island 7756
Cpgi7757 15 100914720 to 100914920 200 CpG island CpG island 7757
Cpgi7758 15 100923547 to 100923840 293 CpG island CpG island 7758
Cpgi7759 15 100936160 to 100936564 404 CpG island CpG island 7759
Tssr133178 15 100952422 to 100952424 2 + TSS region transcription start site region 133178
Cpgi7760 15 100983409 to 100984283 874 CpG island CpG island 7760
Cpgi7761 15 101015686 to 101016088 402 CpG island CpG island 7761
Cpgi7762 15 101039458 to 101040773 1315 CpG island CpG island 7762
Tssr133179 15 101040859 to 101040871 12 + TSS region transcription start site region 133179
Tssr133180 15 101040907 to 101040922 15 + TSS region transcription start site region 133180
Tssr133181 15 101041035 to 101041053 18 + TSS region transcription start site region 133181
Tssr133182 15 101041103 to 101041140 37 + TSS region transcription start site region 133182
Cpgi7763 15 101045987 to 101047612 1625 CpG island CpG island 7763
Gm47841 15 101046342 to 101047397 1055 - protein coding gene predicted gene, 47841
Tssr136507 15 101047362 to 101047376 14 - TSS region transcription start site region 136507
Tssr136508 15 101047380 to 101047385 5 - TSS region transcription start site region 136508
Tssr136509 15 101047401 to 101047404 3 - TSS region transcription start site region 136509
Tssr136510 15 101047420 to 101047429 9 - TSS region transcription start site region 136510
Fignl2 15 101050194 to 101078567 28373 - protein coding gene fidgetin-like 2
Cpgi7764 15 101052151 to 101054590 2439 CpG island CpG island 7764
Tssr136511 15 101052178 to 101052206 28 - TSS region transcription start site region 136511
Tssr136512 15 101052251 to 101052264 13 - TSS region transcription start site region 136512
Tssr136513 15 101054325 to 101054344 19 - TSS region transcription start site region 136513