Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:100668319-101788344

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431 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bin2 15 100641077 to 100669553 28476 - protein coding gene bridging integrator 2
Cpgi7746 15 100669165 to 100669641 476 CpG island CpG island 7746
Tssr136458 15 100669496 to 100669511 15 - TSS region transcription start site region 136458
Tssr136459 15 100669512 to 100669529 17 - TSS region transcription start site region 136459
Tssr136460 15 100669535 to 100669560 25 - TSS region transcription start site region 136460
Tssr133153 15 100674419 to 100674431 12 + TSS region transcription start site region 133153
Cela1 15 100674422 to 100687920 13498 - protein coding gene chymotrypsin-like elastase family, member 1
Tssr4720 15 100674466 to 100674467 1 - TSS region transcription start site region 4720
Tssr136461 15 100674471 to 100674496 25 - TSS region transcription start site region 136461
Tssr136462 15 100674570 to 100674588 18 - TSS region transcription start site region 136462
Tssr136463 15 100674602 to 100674618 16 - TSS region transcription start site region 136463
Tssr133154 15 100674605 to 100674633 28 + TSS region transcription start site region 133154
Tssr136464 15 100674657 to 100674659 2 - TSS region transcription start site region 136464
Tssr136465 15 100674673 to 100674682 9 - TSS region transcription start site region 136465
Tssr136466 15 100674706 to 100674717 11 - TSS region transcription start site region 136466
Tssr136467 15 100674718 to 100674720 2 - TSS region transcription start site region 136467
Tssr136468 15 100675354 to 100675362 8 - TSS region transcription start site region 136468
Tssr136469 15 100675375 to 100675402 27 - TSS region transcription start site region 136469
Tssr136470 15 100675403 to 100675414 11 - TSS region transcription start site region 136470
Tssr136471 15 100675416 to 100675436 20 - TSS region transcription start site region 136471
Tssr136472 15 100675438 to 100675447 9 - TSS region transcription start site region 136472
Tssr4721 15 100675528 to 100675574 46 - TSS region transcription start site region 4721
Tssr136473 15 100678084 to 100678093 9 - TSS region transcription start site region 136473
Tssr136474 15 100678114 to 100678122 8 - TSS region transcription start site region 136474
Tssr136475 15 100678173 to 100678178 5 - TSS region transcription start site region 136475
Tssr136476 15 100678835 to 100678850 15 - TSS region transcription start site region 136476
Tssr136477 15 100681177 to 100681264 87 - TSS region transcription start site region 136477
Tssr136478 15 100681569 to 100681585 16 - TSS region transcription start site region 136478
Tssr136479 15 100681884 to 100681919 35 - TSS region transcription start site region 136479
Tssr136480 15 100681920 to 100681931 11 - TSS region transcription start site region 136480
Tssr136481 15 100681940 to 100681951 11 - TSS region transcription start site region 136481
Tssr136482 15 100681952 to 100681957 5 - TSS region transcription start site region 136482
Tssr136483 15 100681958 to 100681974 16 - TSS region transcription start site region 136483
Tssr136484 15 100682028 to 100682041 13 - TSS region transcription start site region 136484
Tssr136485 15 100682060 to 100682071 11 - TSS region transcription start site region 136485
Tssr136486 15 100682832 to 100682848 16 - TSS region transcription start site region 136486
Tssr136487 15 100682920 to 100682943 23 - TSS region transcription start site region 136487
Tssr136488 15 100682948 to 100682979 31 - TSS region transcription start site region 136488
Tssr136489 15 100682980 to 100683000 20 - TSS region transcription start site region 136489
Tssr136490 15 100683009 to 100683031 22 - TSS region transcription start site region 136490
Tssr136491 15 100683302 to 100683306 4 - TSS region transcription start site region 136491
Tssr133155 15 100684578 to 100684604 26 + TSS region transcription start site region 133155
Tssr133156 15 100684609 to 100684622 13 + TSS region transcription start site region 133156
Tssr136492 15 100684611 to 100684711 100 - TSS region transcription start site region 136492
Tssr133157 15 100684625 to 100684637 12 + TSS region transcription start site region 133157
Tssr136493 15 100685162 to 100685243 81 - TSS region transcription start site region 136493
Cpgi7747 15 100685247 to 100685423 176 CpG island CpG island 7747
Cpgi7748 15 100687111 to 100687268 157 CpG island CpG island 7748
Tssr136494 15 100687118 to 100687126 8 - TSS region transcription start site region 136494
Tssr136495 15 100687150 to 100687212 62 - TSS region transcription start site region 136495
Tssr136496 15 100687214 to 100687241 27 - TSS region transcription start site region 136496
Tssr136497 15 100687908 to 100687924 16 - TSS region transcription start site region 136497
Galnt6 15 100691813 to 100729376 37563 - protein coding gene polypeptide N-acetylgalactosaminyltransferase 6
Tssr133158 15 100695767 to 100695796 29 + TSS region transcription start site region 133158
Galnt6os 15 100695773 to 100704896 9123 + antisense lncRNA gene polypeptide N-acetylgalactosaminyltransferase 6, opposite strand
Tssr133159 15 100695800 to 100695824 24 + TSS region transcription start site region 133159
Cpgi7749 15 100704062 to 100704309 247 CpG island CpG island 7749
Tssr136498 15 100720155 to 100720173 18 - TSS region transcription start site region 136498
Tssr136499 15 100720180 to 100720194 14 - TSS region transcription start site region 136499
Tssr136500 15 100720195 to 100720206 11 - TSS region transcription start site region 136500
Tssr136501 15 100720223 to 100720227 4 - TSS region transcription start site region 136501
Tssr136502 15 100720233 to 100720246 13 - TSS region transcription start site region 136502
Cpgi7750 15 100728706 to 100730010 1304 CpG island CpG island 7750
Tssr136503 15 100729326 to 100729381 55 - TSS region transcription start site region 136503
I730030J21Rik 15 100730505 to 100732737 2232 - lncRNA gene RIKEN cDNA I730030J21 gene
Tssr136504 15 100732712 to 100732740 28 - TSS region transcription start site region 136504
Tssr136505 15 100738383 to 100738390 7 - TSS region transcription start site region 136505
Tssr133160 15 100747405 to 100747409 4 + TSS region transcription start site region 133160
Tssr133161 15 100747875 to 100747883 8 + TSS region transcription start site region 133161
Tssr133162 15 100749894 to 100749907 13 + TSS region transcription start site region 133162
Tssr136506 15 100755297 to 100755301 4 - TSS region transcription start site region 136506
Cpgi7751 15 100761545 to 100762490 945 CpG island CpG island 7751
Tssr133163 15 100761741 to 100761797 56 + TSS region transcription start site region 133163
Slc4a8 15 100761747 to 100823968 62221 + protein coding gene solute carrier family 4 (anion exchanger), member 8
Tssr133164 15 100761849 to 100761864 15 + TSS region transcription start site region 133164
Tssr133165 15 100780243 to 100780247 4 + TSS region transcription start site region 133165
Tssr133166 15 100783803 to 100783818 15 + TSS region transcription start site region 133166
Tssr4722 15 100784347 to 100784348 1 + TSS region transcription start site region 4722
Tssr133167 15 100790443 to 100790456 13 + TSS region transcription start site region 133167
Tssr133168 15 100790847 to 100790853 6 + TSS region transcription start site region 133168
D15Mit97.2 15 100798306 to 100798418 112 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 97.2
D15Mit97 15 100798428 to 100798569 141 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 97
Gm41401 15 100807460 to 100815612 8152 - lncRNA gene predicted gene, 41401
Tssr133169 15 100810472 to 100810494 22 + TSS region transcription start site region 133169
Tssr133170 15 100810587 to 100810601 14 + TSS region transcription start site region 133170
Tssr133171 15 100814291 to 100814338 47 + TSS region transcription start site region 133171
Tssr4723 15 100819561 to 100819603 42 + TSS region transcription start site region 4723
Cpgi7752 15 100825118 to 100825576 458 CpG island CpG island 7752
Gm35569 15 100825679 to 100832391 6712 - lincRNA gene predicted gene, 35569
Scn8a 15 100869858 to 101045938 176080 + protein coding gene sodium channel, voltage-gated, type VIII, alpha
Cpgi7753 15 100870030 to 100871726 1696 CpG island CpG island 7753
Tssr133172 15 100870627 to 100870667 40 + TSS region transcription start site region 133172
Tssr133173 15 100870670 to 100870702 32 + TSS region transcription start site region 133173
Tssr133174 15 100870895 to 100870909 14 + TSS region transcription start site region 133174
Tssr133175 15 100870926 to 100870961 35 + TSS region transcription start site region 133175
Tssr133176 15 100870978 to 100870989 11 + TSS region transcription start site region 133176
Tssr133177 15 100870997 to 100871008 11 + TSS region transcription start site region 133177
Cpgi7754 15 100873144 to 100873483 339 CpG island CpG island 7754
Cpgi7755 15 100895810 to 100896061 251 CpG island CpG island 7755
Cpgi7756 15 100896558 to 100896828 270 CpG island CpG island 7756
Cpgi7757 15 100914720 to 100914920 200 CpG island CpG island 7757
Cpgi7758 15 100923547 to 100923840 293 CpG island CpG island 7758
Cpgi7759 15 100936160 to 100936564 404 CpG island CpG island 7759
Tssr133178 15 100952422 to 100952424 2 + TSS region transcription start site region 133178
Cpgi7760 15 100983409 to 100984283 874 CpG island CpG island 7760
Cpgi7761 15 101015686 to 101016088 402 CpG island CpG island 7761
Cpgi7762 15 101039458 to 101040773 1315 CpG island CpG island 7762
Tssr133179 15 101040859 to 101040871 12 + TSS region transcription start site region 133179
Tssr133180 15 101040907 to 101040922 15 + TSS region transcription start site region 133180
Tssr133181 15 101041035 to 101041053 18 + TSS region transcription start site region 133181
Tssr133182 15 101041103 to 101041140 37 + TSS region transcription start site region 133182
Cpgi7763 15 101045987 to 101047612 1625 CpG island CpG island 7763
Gm47841 15 101046342 to 101047397 1055 - protein coding gene predicted gene, 47841
Tssr136507 15 101047362 to 101047376 14 - TSS region transcription start site region 136507
Tssr136508 15 101047380 to 101047385 5 - TSS region transcription start site region 136508
Tssr136509 15 101047401 to 101047404 3 - TSS region transcription start site region 136509
Tssr136510 15 101047420 to 101047429 9 - TSS region transcription start site region 136510
Fignl2 15 101050194 to 101078567 28373 - protein coding gene fidgetin-like 2
Cpgi7764 15 101052151 to 101054590 2439 CpG island CpG island 7764
Tssr136511 15 101052178 to 101052206 28 - TSS region transcription start site region 136511
Tssr136512 15 101052251 to 101052264 13 - TSS region transcription start site region 136512
Tssr136513 15 101054325 to 101054344 19 - TSS region transcription start site region 136513
Cpgi7765 15 101077466 to 101079530 2064 CpG island CpG island 7765
Tssr133183 15 101077881 to 101077920 39 + TSS region transcription start site region 133183
Tssr136514 15 101078369 to 101078380 11 - TSS region transcription start site region 136514
Tssr136515 15 101078410 to 101078419 9 - TSS region transcription start site region 136515
Tssr136516 15 101078489 to 101078513 24 - TSS region transcription start site region 136516
Tssr136517 15 101078807 to 101078830 23 - TSS region transcription start site region 136517
Tssr136518 15 101078882 to 101078932 50 - TSS region transcription start site region 136518
Cpgi7766 15 101097987 to 101098363 376 CpG island CpG island 7766
Gm41402 15 101103007 to 101106065 3058 + lncRNA gene predicted gene, 41402
Tssr133184 15 101115738 to 101115753 15 + TSS region transcription start site region 133184
Ankrd33 15 101115755 to 101120040 4285 + protein coding gene ankyrin repeat domain 33
Tssr133185 15 101115773 to 101115786 13 + TSS region transcription start site region 133185
Tssr133186 15 101115796 to 101115805 9 + TSS region transcription start site region 133186
Tssr4724 15 101115823 to 101115831 8 + TSS region transcription start site region 4724
Tssr136519 15 101122335 to 101122339 4 - TSS region transcription start site region 136519
Acvrl1 15 101128522 to 101145336 16814 + protein coding gene activin A receptor, type II-like 1
Tssr133187 15 101128525 to 101128536 11 + TSS region transcription start site region 133187
Tssr133188 15 101128544 to 101128562 18 + TSS region transcription start site region 133188
Tssr133189 15 101128574 to 101128587 13 + TSS region transcription start site region 133189
Cpgi7767 15 101128603 to 101129274 671 CpG island CpG island 7767
Tssr133190 15 101128927 to 101128948 21 + TSS region transcription start site region 133190
Gm16031 15 101129916 to 101131592 1676 - antisense lncRNA gene predicted gene 16031
Tssr133191 15 101134584 to 101134592 8 + TSS region transcription start site region 133191
Tssr133192 15 101134598 to 101134630 32 + TSS region transcription start site region 133192
Tssr133193 15 101134636 to 101134664 28 + TSS region transcription start site region 133193
Cpgi7768 15 101136964 to 101137602 638 CpG island CpG island 7768
Cpgi7769 15 101145430 to 101145809 379 CpG island CpG island 7769
Cpgi7770 15 101173511 to 101174999 1488 CpG island CpG island 7770
Tssr133194 15 101174096 to 101174148 52 + TSS region transcription start site region 133194
Acvr1b 15 101174125 to 101212601 38476 + protein coding gene activin A receptor, type 1B
Tssr133195 15 101186362 to 101186404 42 + TSS region transcription start site region 133195
Mir6962 15 101193869 to 101193931 62 + miRNA gene microRNA 6962
Tssr136520 15 101215683 to 101215687 4 - TSS region transcription start site region 136520
Tssr136521 15 101217270 to 101217278 8 - TSS region transcription start site region 136521
A330009N23Rik 15 101221195 to 101225186 3991 - antisense lncRNA gene RIKEN cDNA A330009N23 gene
AU021063 15 101221247 to 101222155 908 + lincRNA gene expressed sequence AU021063
Cpgi7771 15 101223966 to 101225218 1252 CpG island CpG island 7771
Grasp 15 101224207 to 101232756 8549 + protein coding gene GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein
Tssr133196 15 101224217 to 101224231 14 + TSS region transcription start site region 133196
Tssr133197 15 101224322 to 101224338 16 + TSS region transcription start site region 133197
Tssr136522 15 101224625 to 101224638 13 - TSS region transcription start site region 136522
Tssr136523 15 101225135 to 101225158 23 - TSS region transcription start site region 136523
Tssr136524 15 101225163 to 101225178 15 - TSS region transcription start site region 136524
Tssr4725 15 101228319 to 101228344 25 + TSS region transcription start site region 4725
Cpgi7772 15 101230540 to 101230761 221 CpG island CpG island 7772
Cpgi7773 15 101231110 to 101232152 1042 CpG island CpG island 7773
Tssr133198 15 101232204 to 101232208 4 + TSS region transcription start site region 133198
Tssr133199 15 101232403 to 101232433 30 + TSS region transcription start site region 133199
Cpgi7774 15 101239085 to 101239421 336 CpG island CpG island 7774
Tssr4726 15 101244175 to 101244177 2 + TSS region transcription start site region 4726
Cpgi7775 15 101246209 to 101246808 599 CpG island CpG island 7775
Tssr133200 15 101246572 to 101246587 15 + TSS region transcription start site region 133200
Tssr136525 15 101247191 to 101247221 30 - TSS region transcription start site region 136525
Tssr133201 15 101247401 to 101247412 11 + TSS region transcription start site region 133201
Tssr136526 15 101248141 to 101248144 3 - TSS region transcription start site region 136526
Tssr4727 15 101248270 to 101248283 13 + TSS region transcription start site region 4727
Tssr136527 15 101248717 to 101248726 9 - TSS region transcription start site region 136527
Tssr136528 15 101250266 to 101250275 9 - TSS region transcription start site region 136528
Tssr136529 15 101250363 to 101250396 33 - TSS region transcription start site region 136529
Cpgi7776 15 101253689 to 101254940 1251 CpG island CpG island 7776
Tssr136530 15 101253697 to 101253705 8 - TSS region transcription start site region 136530
Tssr136531 15 101253722 to 101253740 18 - TSS region transcription start site region 136531
Tssr136532 15 101253776 to 101253808 32 - TSS region transcription start site region 136532
Tssr136533 15 101253966 to 101253998 32 - TSS region transcription start site region 136533
Tssr133202 15 101254200 to 101254329 129 + TSS region transcription start site region 133202
Nr4a1 15 101254269 to 101274795 20526 + protein coding gene nuclear receptor subfamily 4, group A, member 1
Tssr133203 15 101254486 to 101254497 11 + TSS region transcription start site region 133203
Tssr133204 15 101254511 to 101254518 7 + TSS region transcription start site region 133204
Tssr136534 15 101256001 to 101256006 5 - TSS region transcription start site region 136534
Tssr136535 15 101256030 to 101256039 9 - TSS region transcription start site region 136535
Tssr136536 15 101256049 to 101256058 9 - TSS region transcription start site region 136536
Tssr136537 15 101256171 to 101256180 9 - TSS region transcription start site region 136537
Tssr136538 15 101256229 to 101256240 11 - TSS region transcription start site region 136538
Tssr133205 15 101256385 to 101256393 8 + TSS region transcription start site region 133205
Tssr133206 15 101256400 to 101256418 18 + TSS region transcription start site region 133206
Tssr136539 15 101256916 to 101256931 15 - TSS region transcription start site region 136539
Tssr133207 15 101257235 to 101257252 17 + TSS region transcription start site region 133207
Tssr133208 15 101258396 to 101258402 6 + TSS region transcription start site region 133208