Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:100476741-101046797

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180 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Letmd1 15 100469023 to 100479164 10141 + protein coding gene LETM1 domain containing 1
Tssr133132 15 100478794 to 100478799 5 + TSS region transcription start site region 133132
Csrnp2 15 100479570 to 100495239 15669 - protein coding gene cysteine-serine-rich nuclear protein 2
Tssr136429 15 100480583 to 100480588 5 - TSS region transcription start site region 136429
Tssr136430 15 100486606 to 100486630 24 - TSS region transcription start site region 136430
Tssr136431 15 100491852 to 100491853 1 - TSS region transcription start site region 136431
Cpgi7740 15 100494470 to 100495583 1113 CpG island CpG island 7740
Tssr136432 15 100495055 to 100495057 2 - TSS region transcription start site region 136432
Tssr136433 15 100495251 to 100495267 16 - TSS region transcription start site region 136433
Tfcp2 15 100498012 to 100552008 53996 - protein coding gene transcription factor CP2
Cpgi7741 15 100551216 to 100552332 1116 CpG island CpG island 7741
Tssr136434 15 100551836 to 100551856 20 - TSS region transcription start site region 136434
Tssr136435 15 100551959 to 100552010 51 - TSS region transcription start site region 136435
Pou6f1 15 100575318 to 100599984 24666 - protein coding gene POU domain, class 6, transcription factor 1
Tssr136436 15 100580204 to 100580236 32 - TSS region transcription start site region 136436
Tssr136437 15 100591684 to 100591690 6 - TSS region transcription start site region 136437
Gm27209 15 100595416 to 100597293 1877 + antisense lncRNA gene predicted gene 27209
Tssr133133 15 100598967 to 100599015 48 + TSS region transcription start site region 133133
Cpgi7742 15 100599132 to 100600648 1516 CpG island CpG island 7742
Tssr133134 15 100599722 to 100599747 25 + TSS region transcription start site region 133134
Tssr133135 15 100599750 to 100599767 17 + TSS region transcription start site region 133135
Tssr133136 15 100599772 to 100599793 21 + TSS region transcription start site region 133136
Tssr136438 15 100599962 to 100599979 17 - TSS region transcription start site region 136438
Tssr136439 15 100599983 to 100600039 56 - TSS region transcription start site region 136439
Gm49492 15 100600204 to 100602766 2562 + bidirectional promoter lncRNA gene predicted gene, 49492
Tssr133137 15 100601977 to 100601981 4 + TSS region transcription start site region 133137
1110013H19Rik 15 100613173 to 100613843 670 - lincRNA gene RIKEN cDNA 1110013H19 gene
Cpgi7743 15 100613581 to 100613764 183 CpG island CpG island 7743
C330013E15Rik 15 100614140 to 100615110 970 - bidirectional promoter lncRNA gene RIKEN cDNA C330013E15 gene
Cpgi7744 15 100614391 to 100616573 2182 CpG island CpG island 7744
Tssr136440 15 100615071 to 100615124 53 - TSS region transcription start site region 136440
Tssr133138 15 100615620 to 100615677 57 + TSS region transcription start site region 133138
Dazap2 15 100615662 to 100620761 5099 + protein coding gene DAZ associated protein 2
Tssr136441 15 100615920 to 100615938 18 - TSS region transcription start site region 136441
Tssr133139 15 100616042 to 100616109 67 + TSS region transcription start site region 133139
Tssr133140 15 100616276 to 100616305 29 + TSS region transcription start site region 133140
Tssr133141 15 100616319 to 100616339 20 + TSS region transcription start site region 133141
Tssr133142 15 100616902 to 100616925 23 + TSS region transcription start site region 133142
Tssr133143 15 100619516 to 100619532 16 + TSS region transcription start site region 133143
Tssr133144 15 100619670 to 100619688 18 + TSS region transcription start site region 133144
Tssr133145 15 100619728 to 100619762 34 + TSS region transcription start site region 133145
Tssr133146 15 100619827 to 100619840 13 + TSS region transcription start site region 133146
Tssr133147 15 100619853 to 100619897 44 + TSS region transcription start site region 133147
Tssr133148 15 100619899 to 100619912 13 + TSS region transcription start site region 133148
Tssr133149 15 100619964 to 100620007 43 + TSS region transcription start site region 133149
Tssr136442 15 100620021 to 100620043 22 - TSS region transcription start site region 136442
Tssr133150 15 100620029 to 100620059 30 + TSS region transcription start site region 133150
Smagp 15 100621339 to 100636940 15601 - protein coding gene small cell adhesion glycoprotein
Cpgi7745 15 100636105 to 100637418 1313 CpG island CpG island 7745
Tssr136443 15 100636703 to 100636735 32 - TSS region transcription start site region 136443
Tssr136444 15 100636742 to 100636777 35 - TSS region transcription start site region 136444
Tssr136445 15 100636833 to 100636848 15 - TSS region transcription start site region 136445
Tssr136446 15 100636853 to 100636900 47 - TSS region transcription start site region 136446
Tssr136447 15 100636992 to 100637002 10 - TSS region transcription start site region 136447
Tssr136448 15 100637068 to 100637082 14 - TSS region transcription start site region 136448
Tssr136449 15 100637084 to 100637107 23 - TSS region transcription start site region 136449
Tssr136450 15 100637109 to 100637155 46 - TSS region transcription start site region 136450
Tssr136451 15 100637270 to 100637281 11 - TSS region transcription start site region 136451
Bin2 15 100641077 to 100669553 28476 - protein coding gene bridging integrator 2
Tssr133151 15 100641210 to 100641245 35 + TSS region transcription start site region 133151
Tssr136452 15 100641459 to 100641482 23 - TSS region transcription start site region 136452
Tssr136453 15 100641511 to 100641521 10 - TSS region transcription start site region 136453
Tssr136454 15 100644912 to 100644938 26 - TSS region transcription start site region 136454
Tssr136455 15 100644940 to 100644957 17 - TSS region transcription start site region 136455
Tssr136456 15 100645024 to 100645035 11 - TSS region transcription start site region 136456
Mir6961 15 100649163 to 100649229 66 - miRNA gene microRNA 6961
Tssr133152 15 100665297 to 100665310 13 + TSS region transcription start site region 133152
Tssr136457 15 100667604 to 100667605 1 - TSS region transcription start site region 136457
Cpgi7746 15 100669165 to 100669641 476 CpG island CpG island 7746
Tssr136458 15 100669496 to 100669511 15 - TSS region transcription start site region 136458
Tssr136459 15 100669512 to 100669529 17 - TSS region transcription start site region 136459
Tssr136460 15 100669535 to 100669560 25 - TSS region transcription start site region 136460
Tssr133153 15 100674419 to 100674431 12 + TSS region transcription start site region 133153
Cela1 15 100674422 to 100687920 13498 - protein coding gene chymotrypsin-like elastase family, member 1
Tssr4720 15 100674466 to 100674467 1 - TSS region transcription start site region 4720
Tssr136461 15 100674471 to 100674496 25 - TSS region transcription start site region 136461
Tssr136462 15 100674570 to 100674588 18 - TSS region transcription start site region 136462
Tssr136463 15 100674602 to 100674618 16 - TSS region transcription start site region 136463
Tssr133154 15 100674605 to 100674633 28 + TSS region transcription start site region 133154
Tssr136464 15 100674657 to 100674659 2 - TSS region transcription start site region 136464
Tssr136465 15 100674673 to 100674682 9 - TSS region transcription start site region 136465
Tssr136466 15 100674706 to 100674717 11 - TSS region transcription start site region 136466
Tssr136467 15 100674718 to 100674720 2 - TSS region transcription start site region 136467
Tssr136468 15 100675354 to 100675362 8 - TSS region transcription start site region 136468
Tssr136469 15 100675375 to 100675402 27 - TSS region transcription start site region 136469
Tssr136470 15 100675403 to 100675414 11 - TSS region transcription start site region 136470
Tssr136471 15 100675416 to 100675436 20 - TSS region transcription start site region 136471
Tssr136472 15 100675438 to 100675447 9 - TSS region transcription start site region 136472
Tssr4721 15 100675528 to 100675574 46 - TSS region transcription start site region 4721
Tssr136473 15 100678084 to 100678093 9 - TSS region transcription start site region 136473
Tssr136474 15 100678114 to 100678122 8 - TSS region transcription start site region 136474
Tssr136475 15 100678173 to 100678178 5 - TSS region transcription start site region 136475
Tssr136476 15 100678835 to 100678850 15 - TSS region transcription start site region 136476
Tssr136477 15 100681177 to 100681264 87 - TSS region transcription start site region 136477
Tssr136478 15 100681569 to 100681585 16 - TSS region transcription start site region 136478
Tssr136479 15 100681884 to 100681919 35 - TSS region transcription start site region 136479
Tssr136480 15 100681920 to 100681931 11 - TSS region transcription start site region 136480
Tssr136481 15 100681940 to 100681951 11 - TSS region transcription start site region 136481
Tssr136482 15 100681952 to 100681957 5 - TSS region transcription start site region 136482
Tssr136483 15 100681958 to 100681974 16 - TSS region transcription start site region 136483
Tssr136484 15 100682028 to 100682041 13 - TSS region transcription start site region 136484
Tssr136485 15 100682060 to 100682071 11 - TSS region transcription start site region 136485
Tssr136486 15 100682832 to 100682848 16 - TSS region transcription start site region 136486
Tssr136487 15 100682920 to 100682943 23 - TSS region transcription start site region 136487
Tssr136488 15 100682948 to 100682979 31 - TSS region transcription start site region 136488
Tssr136489 15 100682980 to 100683000 20 - TSS region transcription start site region 136489
Tssr136490 15 100683009 to 100683031 22 - TSS region transcription start site region 136490
Tssr136491 15 100683302 to 100683306 4 - TSS region transcription start site region 136491
Tssr133155 15 100684578 to 100684604 26 + TSS region transcription start site region 133155
Tssr133156 15 100684609 to 100684622 13 + TSS region transcription start site region 133156
Tssr136492 15 100684611 to 100684711 100 - TSS region transcription start site region 136492
Tssr133157 15 100684625 to 100684637 12 + TSS region transcription start site region 133157
Tssr136493 15 100685162 to 100685243 81 - TSS region transcription start site region 136493
Cpgi7747 15 100685247 to 100685423 176 CpG island CpG island 7747
Cpgi7748 15 100687111 to 100687268 157 CpG island CpG island 7748
Tssr136494 15 100687118 to 100687126 8 - TSS region transcription start site region 136494
Tssr136495 15 100687150 to 100687212 62 - TSS region transcription start site region 136495
Tssr136496 15 100687214 to 100687241 27 - TSS region transcription start site region 136496
Tssr136497 15 100687908 to 100687924 16 - TSS region transcription start site region 136497
Galnt6 15 100691813 to 100729376 37563 - protein coding gene polypeptide N-acetylgalactosaminyltransferase 6
Tssr133158 15 100695767 to 100695796 29 + TSS region transcription start site region 133158
Galnt6os 15 100695773 to 100704896 9123 + antisense lncRNA gene polypeptide N-acetylgalactosaminyltransferase 6, opposite strand
Tssr133159 15 100695800 to 100695824 24 + TSS region transcription start site region 133159
Cpgi7749 15 100704062 to 100704309 247 CpG island CpG island 7749
Tssr136498 15 100720155 to 100720173 18 - TSS region transcription start site region 136498
Tssr136499 15 100720180 to 100720194 14 - TSS region transcription start site region 136499
Tssr136500 15 100720195 to 100720206 11 - TSS region transcription start site region 136500
Tssr136501 15 100720223 to 100720227 4 - TSS region transcription start site region 136501
Tssr136502 15 100720233 to 100720246 13 - TSS region transcription start site region 136502
Cpgi7750 15 100728706 to 100730010 1304 CpG island CpG island 7750
Tssr136503 15 100729326 to 100729381 55 - TSS region transcription start site region 136503
I730030J21Rik 15 100730505 to 100732737 2232 - lncRNA gene RIKEN cDNA I730030J21 gene
Tssr136504 15 100732712 to 100732740 28 - TSS region transcription start site region 136504
Tssr136505 15 100738383 to 100738390 7 - TSS region transcription start site region 136505
Tssr133160 15 100747405 to 100747409 4 + TSS region transcription start site region 133160
Tssr133161 15 100747875 to 100747883 8 + TSS region transcription start site region 133161
Tssr133162 15 100749894 to 100749907 13 + TSS region transcription start site region 133162
Tssr136506 15 100755297 to 100755301 4 - TSS region transcription start site region 136506
Cpgi7751 15 100761545 to 100762490 945 CpG island CpG island 7751
Tssr133163 15 100761741 to 100761797 56 + TSS region transcription start site region 133163
Slc4a8 15 100761747 to 100823968 62221 + protein coding gene solute carrier family 4 (anion exchanger), member 8
Tssr133164 15 100761849 to 100761864 15 + TSS region transcription start site region 133164
Tssr133165 15 100780243 to 100780247 4 + TSS region transcription start site region 133165
Tssr133166 15 100783803 to 100783818 15 + TSS region transcription start site region 133166
Tssr4722 15 100784347 to 100784348 1 + TSS region transcription start site region 4722
Tssr133167 15 100790443 to 100790456 13 + TSS region transcription start site region 133167
Tssr133168 15 100790847 to 100790853 6 + TSS region transcription start site region 133168
D15Mit97.2 15 100798306 to 100798418 112 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 97.2
D15Mit97 15 100798428 to 100798569 141 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 97
Gm41401 15 100807460 to 100815612 8152 - lncRNA gene predicted gene, 41401
Tssr133169 15 100810472 to 100810494 22 + TSS region transcription start site region 133169
Tssr133170 15 100810587 to 100810601 14 + TSS region transcription start site region 133170
Tssr133171 15 100814291 to 100814338 47 + TSS region transcription start site region 133171
Tssr4723 15 100819561 to 100819603 42 + TSS region transcription start site region 4723
Cpgi7752 15 100825118 to 100825576 458 CpG island CpG island 7752
Gm35569 15 100825679 to 100832391 6712 - lincRNA gene predicted gene, 35569
Scn8a 15 100869858 to 101045938 176080 + protein coding gene sodium channel, voltage-gated, type VIII, alpha
Cpgi7753 15 100870030 to 100871726 1696 CpG island CpG island 7753
Tssr133172 15 100870627 to 100870667 40 + TSS region transcription start site region 133172
Tssr133173 15 100870670 to 100870702 32 + TSS region transcription start site region 133173
Tssr133174 15 100870895 to 100870909 14 + TSS region transcription start site region 133174
Tssr133175 15 100870926 to 100870961 35 + TSS region transcription start site region 133175
Tssr133176 15 100870978 to 100870989 11 + TSS region transcription start site region 133176
Tssr133177 15 100870997 to 100871008 11 + TSS region transcription start site region 133177
Cpgi7754 15 100873144 to 100873483 339 CpG island CpG island 7754
Cpgi7755 15 100895810 to 100896061 251 CpG island CpG island 7755
Cpgi7756 15 100896558 to 100896828 270 CpG island CpG island 7756
Cpgi7757 15 100914720 to 100914920 200 CpG island CpG island 7757
Cpgi7758 15 100923547 to 100923840 293 CpG island CpG island 7758
Cpgi7759 15 100936160 to 100936564 404 CpG island CpG island 7759
Tssr133178 15 100952422 to 100952424 2 + TSS region transcription start site region 133178
Cpgi7760 15 100983409 to 100984283 874 CpG island CpG island 7760
Cpgi7761 15 101015686 to 101016088 402 CpG island CpG island 7761
Cpgi7762 15 101039458 to 101040773 1315 CpG island CpG island 7762
Tssr133179 15 101040859 to 101040871 12 + TSS region transcription start site region 133179
Tssr133180 15 101040907 to 101040922 15 + TSS region transcription start site region 133180
Tssr133181 15 101041035 to 101041053 18 + TSS region transcription start site region 133181
Tssr133182 15 101041103 to 101041140 37 + TSS region transcription start site region 133182
Cpgi7763 15 101045987 to 101047612 1625 CpG island CpG island 7763
Gm47841 15 101046342 to 101047397 1055 - protein coding gene predicted gene, 47841