Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:100441959-100662010

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr133126 15 100443296 to 100443311 15 + TSS region transcription start site region 133126
Cpgi7736 15 100443521 to 100443784 263 CpG island CpG island 7736
n-R5s43 15 100449684 to 100449793 109 + rRNA gene nuclear encoded rRNA 5S 43
Cpgi7737 15 100457350 to 100457655 305 CpG island CpG island 7737
5330439K02Rik 15 100459740 to 100468691 8951 - bidirectional promoter lncRNA gene RIKEN cDNA 5330439K02 gene
Cpgi7738 15 100461059 to 100461217 158 CpG island CpG island 7738
Tssr133127 15 100461197 to 100461208 11 + TSS region transcription start site region 133127
Cpgi7739 15 100468439 to 100469956 1517 CpG island CpG island 7739
Tssr133128 15 100468975 to 100468993 18 + TSS region transcription start site region 133128
Letmd1 15 100469023 to 100479164 10141 + protein coding gene LETM1 domain containing 1
Tssr133129 15 100469056 to 100469075 19 + TSS region transcription start site region 133129
Tssr133130 15 100469081 to 100469126 45 + TSS region transcription start site region 133130
Tssr133131 15 100469790 to 100469801 11 + TSS region transcription start site region 133131
Tssr133132 15 100478794 to 100478799 5 + TSS region transcription start site region 133132
Csrnp2 15 100479570 to 100495239 15669 - protein coding gene cysteine-serine-rich nuclear protein 2
Tssr136429 15 100480583 to 100480588 5 - TSS region transcription start site region 136429
Tssr136430 15 100486606 to 100486630 24 - TSS region transcription start site region 136430
Tssr136431 15 100491852 to 100491853 1 - TSS region transcription start site region 136431
Cpgi7740 15 100494470 to 100495583 1113 CpG island CpG island 7740
Tssr136432 15 100495055 to 100495057 2 - TSS region transcription start site region 136432
Tssr136433 15 100495251 to 100495267 16 - TSS region transcription start site region 136433
Tfcp2 15 100498012 to 100552008 53996 - protein coding gene transcription factor CP2
Cpgi7741 15 100551216 to 100552332 1116 CpG island CpG island 7741
Tssr136434 15 100551836 to 100551856 20 - TSS region transcription start site region 136434
Tssr136435 15 100551959 to 100552010 51 - TSS region transcription start site region 136435
Pou6f1 15 100575318 to 100599984 24666 - protein coding gene POU domain, class 6, transcription factor 1
Tssr136436 15 100580204 to 100580236 32 - TSS region transcription start site region 136436
Tssr136437 15 100591684 to 100591690 6 - TSS region transcription start site region 136437
Gm27209 15 100595416 to 100597293 1877 + antisense lncRNA gene predicted gene 27209
Tssr133133 15 100598967 to 100599015 48 + TSS region transcription start site region 133133
Cpgi7742 15 100599132 to 100600648 1516 CpG island CpG island 7742
Tssr133134 15 100599722 to 100599747 25 + TSS region transcription start site region 133134
Tssr133135 15 100599750 to 100599767 17 + TSS region transcription start site region 133135
Tssr133136 15 100599772 to 100599793 21 + TSS region transcription start site region 133136
Tssr136438 15 100599962 to 100599979 17 - TSS region transcription start site region 136438
Tssr136439 15 100599983 to 100600039 56 - TSS region transcription start site region 136439
Gm49492 15 100600204 to 100602766 2562 + bidirectional promoter lncRNA gene predicted gene, 49492
Tssr133137 15 100601977 to 100601981 4 + TSS region transcription start site region 133137
1110013H19Rik 15 100613173 to 100613843 670 - lincRNA gene RIKEN cDNA 1110013H19 gene
Cpgi7743 15 100613581 to 100613764 183 CpG island CpG island 7743
C330013E15Rik 15 100614140 to 100615110 970 - bidirectional promoter lncRNA gene RIKEN cDNA C330013E15 gene
Cpgi7744 15 100614391 to 100616573 2182 CpG island CpG island 7744
Tssr136440 15 100615071 to 100615124 53 - TSS region transcription start site region 136440
Tssr133138 15 100615620 to 100615677 57 + TSS region transcription start site region 133138
Dazap2 15 100615662 to 100620761 5099 + protein coding gene DAZ associated protein 2
Tssr136441 15 100615920 to 100615938 18 - TSS region transcription start site region 136441
Tssr133139 15 100616042 to 100616109 67 + TSS region transcription start site region 133139
Tssr133140 15 100616276 to 100616305 29 + TSS region transcription start site region 133140
Tssr133141 15 100616319 to 100616339 20 + TSS region transcription start site region 133141
Tssr133142 15 100616902 to 100616925 23 + TSS region transcription start site region 133142
Tssr133143 15 100619516 to 100619532 16 + TSS region transcription start site region 133143
Tssr133144 15 100619670 to 100619688 18 + TSS region transcription start site region 133144
Tssr133145 15 100619728 to 100619762 34 + TSS region transcription start site region 133145
Tssr133146 15 100619827 to 100619840 13 + TSS region transcription start site region 133146
Tssr133147 15 100619853 to 100619897 44 + TSS region transcription start site region 133147
Tssr133148 15 100619899 to 100619912 13 + TSS region transcription start site region 133148
Tssr133149 15 100619964 to 100620007 43 + TSS region transcription start site region 133149
Tssr136442 15 100620021 to 100620043 22 - TSS region transcription start site region 136442
Tssr133150 15 100620029 to 100620059 30 + TSS region transcription start site region 133150
Smagp 15 100621339 to 100636940 15601 - protein coding gene small cell adhesion glycoprotein
Cpgi7745 15 100636105 to 100637418 1313 CpG island CpG island 7745
Tssr136443 15 100636703 to 100636735 32 - TSS region transcription start site region 136443
Tssr136444 15 100636742 to 100636777 35 - TSS region transcription start site region 136444
Tssr136445 15 100636833 to 100636848 15 - TSS region transcription start site region 136445
Tssr136446 15 100636853 to 100636900 47 - TSS region transcription start site region 136446
Tssr136447 15 100636992 to 100637002 10 - TSS region transcription start site region 136447
Tssr136448 15 100637068 to 100637082 14 - TSS region transcription start site region 136448
Tssr136449 15 100637084 to 100637107 23 - TSS region transcription start site region 136449
Tssr136450 15 100637109 to 100637155 46 - TSS region transcription start site region 136450
Tssr136451 15 100637270 to 100637281 11 - TSS region transcription start site region 136451
Bin2 15 100641077 to 100669553 28476 - protein coding gene bridging integrator 2
Tssr133151 15 100641210 to 100641245 35 + TSS region transcription start site region 133151
Tssr136452 15 100641459 to 100641482 23 - TSS region transcription start site region 136452
Tssr136453 15 100641511 to 100641521 10 - TSS region transcription start site region 136453
Tssr136454 15 100644912 to 100644938 26 - TSS region transcription start site region 136454
Tssr136455 15 100644940 to 100644957 17 - TSS region transcription start site region 136455
Tssr136456 15 100645024 to 100645035 11 - TSS region transcription start site region 136456
Mir6961 15 100649163 to 100649229 66 - miRNA gene microRNA 6961