Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:100171685-100371696

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dip2b 15 100038664 to 100219473 180809 + protein coding gene disco interacting protein 2 homolog B
Tssr133089 15 100181437 to 100181448 11 + TSS region transcription start site region 133089
Tssr133090 15 100182273 to 100182314 41 + TSS region transcription start site region 133090
Gm49475 15 100189900 to 100195311 5411 - antisense lncRNA gene predicted gene, 49475
Tssr133091 15 100198639 to 100198654 15 + TSS region transcription start site region 133091
Tssr133092 15 100199280 to 100199296 16 + TSS region transcription start site region 133092
Tssr133093 15 100202100 to 100202107 7 + TSS region transcription start site region 133093
Tssr133094 15 100217197 to 100217201 4 + TSS region transcription start site region 133094
Tssr133095 15 100227319 to 100227336 17 + TSS region transcription start site region 133095
Cpgi7732 15 100227457 to 100228619 1162 CpG island CpG island 7732
Tssr136413 15 100227721 to 100227761 40 - TSS region transcription start site region 136413
Tssr133096 15 100227813 to 100227824 11 + TSS region transcription start site region 133096
Tssr133097 15 100227835 to 100227856 21 + TSS region transcription start site region 133097
Tssr133098 15 100227858 to 100227869 11 + TSS region transcription start site region 133098
Atf1 15 100227859 to 100261248 33389 + protein coding gene activating transcription factor 1
Tssr133099 15 100227871 to 100227878 7 + TSS region transcription start site region 133099
Tssr133100 15 100227899 to 100227904 5 + TSS region transcription start site region 133100
Tssr133101 15 100227907 to 100227916 9 + TSS region transcription start site region 133101
Tssr133102 15 100227927 to 100227943 16 + TSS region transcription start site region 133102
Tssr133103 15 100228229 to 100228280 51 + TSS region transcription start site region 133103
Tssr133104 15 100228313 to 100228341 28 + TSS region transcription start site region 133104
Tssr133105 15 100246183 to 100246204 21 + TSS region transcription start site region 133105
Tssr133106 15 100246224 to 100246239 15 + TSS region transcription start site region 133106
Tssr133107 15 100251678 to 100251703 25 + TSS region transcription start site region 133107
Tssr133108 15 100251708 to 100251724 16 + TSS region transcription start site region 133108
Tssr133109 15 100269183 to 100269190 7 + TSS region transcription start site region 133109
Tssr4717 15 100270088 to 100270103 15 + TSS region transcription start site region 4717
Tssr133110 15 100271685 to 100271696 11 + TSS region transcription start site region 133110
Tssr133111 15 100275991 to 100275998 7 + TSS region transcription start site region 133111
Tssr133112 15 100279951 to 100279955 4 + TSS region transcription start site region 133112
Cpgi7733 15 100280497 to 100281118 621 CpG island CpG island 7733
Tmprss12 15 100280837 to 100293053 12216 + protein coding gene transmembrane (C-terminal) protease, serine 12
Tssr133113 15 100280850 to 100280871 21 + TSS region transcription start site region 133113
Tssr133114 15 100297123 to 100297156 33 + TSS region transcription start site region 133114
Gm33666 15 100297171 to 100297451 280 + pseudogene predicted gene, 33666
Mettl7a1 15 100304145 to 100328665 24520 + protein coding gene methyltransferase like 7A1
Tssr133115 15 100304155 to 100304175 20 + TSS region transcription start site region 133115
Tssr133116 15 100304181 to 100304190 9 + TSS region transcription start site region 133116
Tssr133117 15 100304198 to 100304210 12 + TSS region transcription start site region 133117
Tssr133118 15 100304211 to 100304222 11 + TSS region transcription start site region 133118
Tssr133119 15 100304227 to 100304243 16 + TSS region transcription start site region 133119
Tssr133120 15 100304782 to 100304848 66 + TSS region transcription start site region 133120
Cpgi7734 15 100304788 to 100305008 220 CpG island CpG island 7734
Tssr133121 15 100304942 to 100304991 49 + TSS region transcription start site region 133121
Tssr4718 15 100306873 to 100306905 32 + TSS region transcription start site region 4718
Tssr4719 15 100313913 to 100313926 13 + TSS region transcription start site region 4719
Mettl7a3 15 100334929 to 100340375 5446 + protein coding gene methyltransferase like 7A3
Tssr133122 15 100345763 to 100345783 20 + TSS region transcription start site region 133122
0610039G09Rik 15 100345772 to 100346367 595 unclassified gene RIKEN cDNA 0610039G09 gene
Methig1 15 100353200 to 100384435 31235 + protein coding gene methyltransferase hypoxia inducible domain containing 1
Mettl7a2 15 100353200 to 100361819 8619 + protein coding gene methyltransferase like 7A2
Tssr133123 15 100364563 to 100364573 10 + TSS region transcription start site region 133123
Higd1c 15 100364585 to 100383955 19370 + protein coding gene HIG1 domain family, member 1C