Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:98609572-99139575

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26139 14 98624190 to 98624296 106 + snRNA gene predicted gene, 26139
Gm27034 14 98714813 to 98715752 939 + pseudogene predicted gene, 27034
Gm46478 14 98861656 to 98873297 11641 - lncRNA gene predicted gene, 46478
Tssr126869 14 98874572 to 98874575 3 + TSS region transcription start site region 126869
Gm49018 14 98887974 to 98920945 32971 - lincRNA gene predicted gene, 49018
Tssr126870 14 98905127 to 98905143 16 + TSS region transcription start site region 126870
Gm41228 14 98905130 to 98968903 63773 + lncRNA gene predicted gene, 41228
Tssr129998 14 98920897 to 98920900 3 - TSS region transcription start site region 129998
Gm18148 14 98922654 to 98923527 873 + pseudogene predicted gene, 18148
Rpl36a-ps1 14 98993870 to 98994318 448 - pseudogene ribosomal protein L36A, pseudogene 1
Tssr129999 14 98994324 to 98994335 11 - TSS region transcription start site region 129999
Mzt1 14 99034544 to 99046134 11590 - protein coding gene mitotic spindle organizing protein 1
Cpgi6798 14 99045405 to 99046679 1274 CpG island CpG island 6798
Tssr130000 14 99046055 to 99046098 43 - TSS region transcription start site region 130000
Tssr130001 14 99046110 to 99046141 31 - TSS region transcription start site region 130001
Bora 14 99046247 to 99074540 28293 + protein coding gene bora, aurora kinase A activator
Tssr126871 14 99046376 to 99046381 5 + TSS region transcription start site region 126871
Tssr126872 14 99046406 to 99046429 23 + TSS region transcription start site region 126872
Tssr126873 14 99046434 to 99046463 29 + TSS region transcription start site region 126873
Dis3 14 99075206 to 99099770 24564 - protein coding gene DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
Tssr130002 14 99090156 to 99090168 12 - TSS region transcription start site region 130002
Cpgi6799 14 99099281 to 99100132 851 CpG island CpG island 6799
Pibf1 14 99099424 to 99254493 155069 + protein coding gene progesterone immunomodulatory binding factor 1
Tssr126874 14 99099468 to 99099476 8 + TSS region transcription start site region 126874
Tssr130003 14 99099701 to 99099785 84 - TSS region transcription start site region 130003
Tssr126875 14 99099876 to 99099962 86 + TSS region transcription start site region 126875
Tssr126876 14 99099988 to 99100012 24 + TSS region transcription start site region 126876
Tssr126877 14 99100016 to 99100028 12 + TSS region transcription start site region 126877
Gm49026 14 99111677 to 99112814 1137 + unclassified gene predicted gene, 49026