Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:98570206-99604770

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr126868 14 98577413 to 98577420 7 + TSS region transcription start site region 126868
Gm26139 14 98624190 to 98624296 106 + snRNA gene predicted gene, 26139
Gm27034 14 98714813 to 98715752 939 + pseudogene predicted gene, 27034
Gm46478 14 98861656 to 98873297 11641 - lncRNA gene predicted gene, 46478
Tssr126869 14 98874572 to 98874575 3 + TSS region transcription start site region 126869
Gm49018 14 98887974 to 98920945 32971 - lincRNA gene predicted gene, 49018
Tssr126870 14 98905127 to 98905143 16 + TSS region transcription start site region 126870
Gm41228 14 98905130 to 98968903 63773 + lncRNA gene predicted gene, 41228
Tssr129998 14 98920897 to 98920900 3 - TSS region transcription start site region 129998
Gm18148 14 98922654 to 98923527 873 + pseudogene predicted gene, 18148
Rpl36a-ps1 14 98993870 to 98994318 448 - pseudogene ribosomal protein L36A, pseudogene 1
Tssr129999 14 98994324 to 98994335 11 - TSS region transcription start site region 129999
Mzt1 14 99034544 to 99046134 11590 - protein coding gene mitotic spindle organizing protein 1
Cpgi6798 14 99045405 to 99046679 1274 CpG island CpG island 6798
Tssr130000 14 99046055 to 99046098 43 - TSS region transcription start site region 130000
Tssr130001 14 99046110 to 99046141 31 - TSS region transcription start site region 130001
Bora 14 99046247 to 99074540 28293 + protein coding gene bora, aurora kinase A activator
Tssr126871 14 99046376 to 99046381 5 + TSS region transcription start site region 126871
Tssr126872 14 99046406 to 99046429 23 + TSS region transcription start site region 126872
Tssr126873 14 99046434 to 99046463 29 + TSS region transcription start site region 126873
Dis3 14 99075206 to 99099770 24564 - protein coding gene DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
Tssr130002 14 99090156 to 99090168 12 - TSS region transcription start site region 130002
Cpgi6799 14 99099281 to 99100132 851 CpG island CpG island 6799
Pibf1 14 99099424 to 99254493 155069 + protein coding gene progesterone immunomodulatory binding factor 1
Tssr126874 14 99099468 to 99099476 8 + TSS region transcription start site region 126874
Tssr130003 14 99099701 to 99099785 84 - TSS region transcription start site region 130003
Tssr126875 14 99099876 to 99099962 86 + TSS region transcription start site region 126875
Tssr126876 14 99099988 to 99100012 24 + TSS region transcription start site region 126876
Tssr126877 14 99100016 to 99100028 12 + TSS region transcription start site region 126877
Gm49026 14 99111677 to 99112814 1137 + unclassified gene predicted gene, 49026
Tssr4505 14 99147867 to 99147868 1 + TSS region transcription start site region 4505
Tssr126878 14 99201607 to 99201612 5 + TSS region transcription start site region 126878
Tssr126879 14 99226165 to 99226174 9 + TSS region transcription start site region 126879
D14Dcr17 14 99287608 to 99287703 95 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 17
Gm4412 14 99291204 to 99291636 432 - pseudogene predicted gene 4412
Tssr126880 14 99294749 to 99294768 19 + TSS region transcription start site region 126880
Cpgi6800 14 99298314 to 99299850 1536 CpG island CpG island 6800
Tssr126881 14 99298652 to 99298715 63 + TSS region transcription start site region 126881
Klf5 14 99298691 to 99313412 14721 + protein coding gene Kruppel-like factor 5
Tssr126882 14 99298945 to 99298989 44 + TSS region transcription start site region 126882
Tssr126883 14 99301634 to 99301662 28 + TSS region transcription start site region 126883
Tssr126884 14 99301663 to 99301686 23 + TSS region transcription start site region 126884
Tssr126885 14 99301688 to 99301703 15 + TSS region transcription start site region 126885
Tssr126886 14 99301803 to 99301814 11 + TSS region transcription start site region 126886
Tssr126887 14 99301899 to 99301913 14 + TSS region transcription start site region 126887
Tssr126888 14 99301981 to 99302028 47 + TSS region transcription start site region 126888
D14Jor1 14 99305526 to 99306106 580 DNA segment DNA segment, Chr 14, Barbara Jordan 1
Tssr126889 14 99310946 to 99310949 3 + TSS region transcription start site region 126889
Cpgi6801 14 99313081 to 99313403 322 CpG island CpG island 6801
Tssr126890 14 99313329 to 99313375 46 + TSS region transcription start site region 126890
Tssr126891 14 99314276 to 99314285 9 + TSS region transcription start site region 126891
Tssr126892 14 99314725 to 99314729 4 + TSS region transcription start site region 126892
Tssr126893 14 99339136 to 99339179 43 + TSS region transcription start site region 126893
Tssr130004 14 99339636 to 99339658 22 - TSS region transcription start site region 130004
Tssr130005 14 99339718 to 99339749 31 - TSS region transcription start site region 130005
Tssr130006 14 99349069 to 99349086 17 - TSS region transcription start site region 130006
Gm22984 14 99352048 to 99352169 121 - snRNA gene predicted gene, 22984
Gm25130 14 99360672 to 99360827 155 - snRNA gene predicted gene, 25130
Gm49218 14 99365682 to 99366017 335 - pseudogene predicted gene, 49218
Gm49219 14 99387439 to 99387778 339 + pseudogene predicted gene, 49219
Gm49220 14 99441657 to 99442677 1020 + pseudogene predicted gene, 49220
Gm41230 14 99522545 to 99576902 54357 + lincRNA gene predicted gene, 41230
Gm33997 14 99578276 to 99608579 30303 + lncRNA gene predicted gene, 33997
Tssr126894 14 99584483 to 99584484 1 + TSS region transcription start site region 126894