Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:98383652-100213715

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49017 14 98519416 to 98519700 284 - pseudogene predicted gene, 49017
Tssr126868 14 98577413 to 98577420 7 + TSS region transcription start site region 126868
Gm26139 14 98624190 to 98624296 106 + snRNA gene predicted gene, 26139
Gm27034 14 98714813 to 98715752 939 + pseudogene predicted gene, 27034
Gm46478 14 98861656 to 98873297 11641 - lncRNA gene predicted gene, 46478
Tssr126869 14 98874572 to 98874575 3 + TSS region transcription start site region 126869
Gm49018 14 98887974 to 98920945 32971 - lincRNA gene predicted gene, 49018
Tssr126870 14 98905127 to 98905143 16 + TSS region transcription start site region 126870
Gm41228 14 98905130 to 98968903 63773 + lncRNA gene predicted gene, 41228
Tssr129998 14 98920897 to 98920900 3 - TSS region transcription start site region 129998
Gm18148 14 98922654 to 98923527 873 + pseudogene predicted gene, 18148
Rpl36a-ps1 14 98993870 to 98994318 448 - pseudogene ribosomal protein L36A, pseudogene 1
Tssr129999 14 98994324 to 98994335 11 - TSS region transcription start site region 129999
Mzt1 14 99034544 to 99046134 11590 - protein coding gene mitotic spindle organizing protein 1
Cpgi6798 14 99045405 to 99046679 1274 CpG island CpG island 6798
Tssr130000 14 99046055 to 99046098 43 - TSS region transcription start site region 130000
Tssr130001 14 99046110 to 99046141 31 - TSS region transcription start site region 130001
Bora 14 99046247 to 99074540 28293 + protein coding gene bora, aurora kinase A activator
Tssr126871 14 99046376 to 99046381 5 + TSS region transcription start site region 126871
Tssr126872 14 99046406 to 99046429 23 + TSS region transcription start site region 126872
Tssr126873 14 99046434 to 99046463 29 + TSS region transcription start site region 126873
Dis3 14 99075206 to 99099770 24564 - protein coding gene DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
Tssr130002 14 99090156 to 99090168 12 - TSS region transcription start site region 130002
Cpgi6799 14 99099281 to 99100132 851 CpG island CpG island 6799
Pibf1 14 99099424 to 99254493 155069 + protein coding gene progesterone immunomodulatory binding factor 1
Tssr126874 14 99099468 to 99099476 8 + TSS region transcription start site region 126874
Tssr130003 14 99099701 to 99099785 84 - TSS region transcription start site region 130003
Tssr126875 14 99099876 to 99099962 86 + TSS region transcription start site region 126875
Tssr126876 14 99099988 to 99100012 24 + TSS region transcription start site region 126876
Tssr126877 14 99100016 to 99100028 12 + TSS region transcription start site region 126877
Gm49026 14 99111677 to 99112814 1137 + unclassified gene predicted gene, 49026
Tssr4505 14 99147867 to 99147868 1 + TSS region transcription start site region 4505
Tssr126878 14 99201607 to 99201612 5 + TSS region transcription start site region 126878
Tssr126879 14 99226165 to 99226174 9 + TSS region transcription start site region 126879
D14Dcr17 14 99287608 to 99287703 95 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 17
Gm4412 14 99291204 to 99291636 432 - pseudogene predicted gene 4412
Tssr126880 14 99294749 to 99294768 19 + TSS region transcription start site region 126880
Cpgi6800 14 99298314 to 99299850 1536 CpG island CpG island 6800
Tssr126881 14 99298652 to 99298715 63 + TSS region transcription start site region 126881
Klf5 14 99298691 to 99313412 14721 + protein coding gene Kruppel-like factor 5
Tssr126882 14 99298945 to 99298989 44 + TSS region transcription start site region 126882
Tssr126883 14 99301634 to 99301662 28 + TSS region transcription start site region 126883
Tssr126884 14 99301663 to 99301686 23 + TSS region transcription start site region 126884
Tssr126885 14 99301688 to 99301703 15 + TSS region transcription start site region 126885
Tssr126886 14 99301803 to 99301814 11 + TSS region transcription start site region 126886
Tssr126887 14 99301899 to 99301913 14 + TSS region transcription start site region 126887
Tssr126888 14 99301981 to 99302028 47 + TSS region transcription start site region 126888
D14Jor1 14 99305526 to 99306106 580 DNA segment DNA segment, Chr 14, Barbara Jordan 1
Tssr126889 14 99310946 to 99310949 3 + TSS region transcription start site region 126889
Cpgi6801 14 99313081 to 99313403 322 CpG island CpG island 6801
Tssr126890 14 99313329 to 99313375 46 + TSS region transcription start site region 126890
Tssr126891 14 99314276 to 99314285 9 + TSS region transcription start site region 126891
Tssr126892 14 99314725 to 99314729 4 + TSS region transcription start site region 126892
Tssr126893 14 99339136 to 99339179 43 + TSS region transcription start site region 126893
Tssr130004 14 99339636 to 99339658 22 - TSS region transcription start site region 130004
Tssr130005 14 99339718 to 99339749 31 - TSS region transcription start site region 130005
Tssr130006 14 99349069 to 99349086 17 - TSS region transcription start site region 130006
Gm22984 14 99352048 to 99352169 121 - snRNA gene predicted gene, 22984
Gm25130 14 99360672 to 99360827 155 - snRNA gene predicted gene, 25130
Gm49218 14 99365682 to 99366017 335 - pseudogene predicted gene, 49218
Gm49219 14 99387439 to 99387778 339 + pseudogene predicted gene, 49219
Gm49220 14 99441657 to 99442677 1020 + pseudogene predicted gene, 49220
Gm41230 14 99522545 to 99576902 54357 + lincRNA gene predicted gene, 41230
Gm33997 14 99578276 to 99608579 30303 + lncRNA gene predicted gene, 33997
Tssr126894 14 99584483 to 99584484 1 + TSS region transcription start site region 126894
Gm49225 14 99617527 to 99620016 2489 - lincRNA gene predicted gene, 49225
Gm9298 14 99629756 to 99630666 910 - pseudogene predicted gene 9298
Gm33880 14 99635297 to 99640846 5549 + lncRNA gene predicted gene, 33880
Gm34061 14 99676983 to 99689318 12335 + lncRNA gene predicted gene, 34061
Tssr4506 14 99697781 to 99697784 3 + TSS region transcription start site region 4506
Gm37093 14 99747465 to 99792773 45308 - unclassified gene predicted gene, 37093
Tssr126895 14 99759608 to 99759614 6 + TSS region transcription start site region 126895
Gm22970 14 99773623 to 99773808 185 - snRNA gene predicted gene, 22970
Cpgi6802 14 99809012 to 99809253 241 CpG island CpG island 6802
Gm5958 14 99835518 to 99835814 296 - pseudogene predicted pseudogene 5958
D14Mit144 14 99924828 to 99925025 197 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 144
Bw40 14 99924828 to 99925025 197 QTL body weight QTL 40
2810416A17Rik 14 99936885 to 99938036 1151 unclassified gene RIKEN cDNA 2810416A17 gene
D14Mit264.2 14 99955814 to 99955951 137 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 264.2
D14Mit104 14 99975602 to 99975729 127 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 104
C130057G02Rik 14 100091719 to 100092742 1023 unclassified gene RIKEN cDNA C130057G02 gene
Tssr130007 14 100109802 to 100109811 9 - TSS region transcription start site region 130007
Tssr130008 14 100165107 to 100165109 2 - TSS region transcription start site region 130008
D14Mit106 14 100181105 to 100181417 312 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 106
Tssr130009 14 100189576 to 100189587 11 - TSS region transcription start site region 130009
Tssr130010 14 100208812 to 100208816 4 - TSS region transcription start site region 130010
4930517O19Rik 14 100213142 to 100245339 32197 + antisense lncRNA gene RIKEN cDNA 4930517O19 gene
Tssr126896 14 100213176 to 100213181 5 + TSS region transcription start site region 126896
Tssr126897 14 100213183 to 100213194 11 + TSS region transcription start site region 126897
Klf12 14 100284679 to 99870632 -414047 - protein coding gene Kruppel-like factor 12