Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:97316055-100776098

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151 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23276 14 97336495 to 97336632 137 - snoRNA gene predicted gene, 23276
Tssr129983 14 97515457 to 97515460 3 - TSS region transcription start site region 129983
Gm9290 14 97665675 to 97666291 616 - pseudogene predicted gene 9290
Dach1 14 97786853 to 98169765 382912 - protein coding gene dachshund family transcription factor 1
9430027J11Rik 14 97808304 to 97811130 2826 unclassified gene RIKEN cDNA 9430027J11 gene
D14Mit272 14 97837717 to 97837840 123 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-272
D14Mit73 14 97862367 to 97862541 174 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 73
8430437N05Rik 14 97953659 to 97954588 929 unclassified non-coding RNA gene RIKEN cDNA 8430437N05 gene
Gm25831 14 97967829 to 97967991 162 - snRNA gene predicted gene, 25831
Tssr129984 14 98068602 to 98068605 3 - TSS region transcription start site region 129984
4833428M15Rik 14 98084711 to 98086731 2020 unclassified gene RIKEN cDNA 4833428M15 gene
Tssr129985 14 98104570 to 98104578 8 - TSS region transcription start site region 129985
Tssr129986 14 98104911 to 98104914 3 - TSS region transcription start site region 129986
Tssr4504 14 98110028 to 98110037 9 - TSS region transcription start site region 4504
Tssr129987 14 98110055 to 98110065 10 - TSS region transcription start site region 129987
Tssr126865 14 98110219 to 98110244 25 + TSS region transcription start site region 126865
Gm16331 14 98118509 to 98119006 497 + pseudogene predicted gene 16331
A730014G21Rik 14 98141084 to 98142657 1573 unclassified gene RIKEN cDNA A730014G21 gene
Tssr129988 14 98159780 to 98159795 15 - TSS region transcription start site region 129988
D14Mit1004 14 98167097 to 98167226 129 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 1004
Tssr126866 14 98167403 to 98167430 27 + TSS region transcription start site region 126866
Cpgi6797 14 98167592 to 98169737 2145 CpG island CpG island 6797
Tssr126867 14 98167886 to 98167899 13 + TSS region transcription start site region 126867
Tssr129989 14 98169091 to 98169102 11 - TSS region transcription start site region 129989
Tssr129990 14 98169208 to 98169263 55 - TSS region transcription start site region 129990
Tssr129991 14 98169283 to 98169297 14 - TSS region transcription start site region 129991
Tssr129992 14 98169313 to 98169342 29 - TSS region transcription start site region 129992
Tssr129993 14 98169464 to 98169479 15 - TSS region transcription start site region 129993
Tssr129994 14 98169542 to 98169595 53 - TSS region transcription start site region 129994
Tssr129995 14 98169603 to 98169618 15 - TSS region transcription start site region 129995
Tssr129996 14 98169752 to 98169806 54 - TSS region transcription start site region 129996
Tssr129997 14 98169811 to 98169840 29 - TSS region transcription start site region 129997
Gm33583 14 98170276 to 98180476 10200 + lncRNA gene predicted gene, 33583
Gm26006 14 98260745 to 98260825 80 - snoRNA gene predicted gene, 26006
Gm46477 14 98273849 to 98274269 420 - pseudogene predicted gene, 46477
Gm49017 14 98519416 to 98519700 284 - pseudogene predicted gene, 49017
Tssr126868 14 98577413 to 98577420 7 + TSS region transcription start site region 126868
Gm26139 14 98624190 to 98624296 106 + snRNA gene predicted gene, 26139
Gm27034 14 98714813 to 98715752 939 + pseudogene predicted gene, 27034
Gm46478 14 98861656 to 98873297 11641 - lncRNA gene predicted gene, 46478
Tssr126869 14 98874572 to 98874575 3 + TSS region transcription start site region 126869
Gm49018 14 98887974 to 98920945 32971 - lincRNA gene predicted gene, 49018
Tssr126870 14 98905127 to 98905143 16 + TSS region transcription start site region 126870
Gm41228 14 98905130 to 98968903 63773 + lncRNA gene predicted gene, 41228
Tssr129998 14 98920897 to 98920900 3 - TSS region transcription start site region 129998
Gm18148 14 98922654 to 98923527 873 + pseudogene predicted gene, 18148
Rpl36a-ps1 14 98993870 to 98994318 448 - pseudogene ribosomal protein L36A, pseudogene 1
Tssr129999 14 98994324 to 98994335 11 - TSS region transcription start site region 129999
Mzt1 14 99034544 to 99046134 11590 - protein coding gene mitotic spindle organizing protein 1
Cpgi6798 14 99045405 to 99046679 1274 CpG island CpG island 6798
Tssr130000 14 99046055 to 99046098 43 - TSS region transcription start site region 130000
Tssr130001 14 99046110 to 99046141 31 - TSS region transcription start site region 130001
Bora 14 99046247 to 99074540 28293 + protein coding gene bora, aurora kinase A activator
Tssr126871 14 99046376 to 99046381 5 + TSS region transcription start site region 126871
Tssr126872 14 99046406 to 99046429 23 + TSS region transcription start site region 126872
Tssr126873 14 99046434 to 99046463 29 + TSS region transcription start site region 126873
Dis3 14 99075206 to 99099770 24564 - protein coding gene DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
Tssr130002 14 99090156 to 99090168 12 - TSS region transcription start site region 130002
Cpgi6799 14 99099281 to 99100132 851 CpG island CpG island 6799
Pibf1 14 99099424 to 99254493 155069 + protein coding gene progesterone immunomodulatory binding factor 1
Tssr126874 14 99099468 to 99099476 8 + TSS region transcription start site region 126874
Tssr130003 14 99099701 to 99099785 84 - TSS region transcription start site region 130003
Tssr126875 14 99099876 to 99099962 86 + TSS region transcription start site region 126875
Tssr126876 14 99099988 to 99100012 24 + TSS region transcription start site region 126876
Tssr126877 14 99100016 to 99100028 12 + TSS region transcription start site region 126877
Gm49026 14 99111677 to 99112814 1137 + unclassified gene predicted gene, 49026
Tssr4505 14 99147867 to 99147868 1 + TSS region transcription start site region 4505
Tssr126878 14 99201607 to 99201612 5 + TSS region transcription start site region 126878
Tssr126879 14 99226165 to 99226174 9 + TSS region transcription start site region 126879
D14Dcr17 14 99287608 to 99287703 95 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 17
Gm4412 14 99291204 to 99291636 432 - pseudogene predicted gene 4412
Tssr126880 14 99294749 to 99294768 19 + TSS region transcription start site region 126880
Cpgi6800 14 99298314 to 99299850 1536 CpG island CpG island 6800
Tssr126881 14 99298652 to 99298715 63 + TSS region transcription start site region 126881
Klf5 14 99298691 to 99313412 14721 + protein coding gene Kruppel-like factor 5
Tssr126882 14 99298945 to 99298989 44 + TSS region transcription start site region 126882
Tssr126883 14 99301634 to 99301662 28 + TSS region transcription start site region 126883
Tssr126884 14 99301663 to 99301686 23 + TSS region transcription start site region 126884
Tssr126885 14 99301688 to 99301703 15 + TSS region transcription start site region 126885
Tssr126886 14 99301803 to 99301814 11 + TSS region transcription start site region 126886
Tssr126887 14 99301899 to 99301913 14 + TSS region transcription start site region 126887
Tssr126888 14 99301981 to 99302028 47 + TSS region transcription start site region 126888
D14Jor1 14 99305526 to 99306106 580 DNA segment DNA segment, Chr 14, Barbara Jordan 1
Tssr126889 14 99310946 to 99310949 3 + TSS region transcription start site region 126889
Cpgi6801 14 99313081 to 99313403 322 CpG island CpG island 6801
Tssr126890 14 99313329 to 99313375 46 + TSS region transcription start site region 126890
Tssr126891 14 99314276 to 99314285 9 + TSS region transcription start site region 126891
Tssr126892 14 99314725 to 99314729 4 + TSS region transcription start site region 126892
Tssr126893 14 99339136 to 99339179 43 + TSS region transcription start site region 126893
Tssr130004 14 99339636 to 99339658 22 - TSS region transcription start site region 130004
Tssr130005 14 99339718 to 99339749 31 - TSS region transcription start site region 130005
Tssr130006 14 99349069 to 99349086 17 - TSS region transcription start site region 130006
Gm22984 14 99352048 to 99352169 121 - snRNA gene predicted gene, 22984
Gm25130 14 99360672 to 99360827 155 - snRNA gene predicted gene, 25130
Gm49218 14 99365682 to 99366017 335 - pseudogene predicted gene, 49218
Gm49219 14 99387439 to 99387778 339 + pseudogene predicted gene, 49219
Gm49220 14 99441657 to 99442677 1020 + pseudogene predicted gene, 49220
Gm41230 14 99522545 to 99576902 54357 + lincRNA gene predicted gene, 41230
Gm33997 14 99578276 to 99608579 30303 + lncRNA gene predicted gene, 33997
Tssr126894 14 99584483 to 99584484 1 + TSS region transcription start site region 126894
Gm49225 14 99617527 to 99620016 2489 - lincRNA gene predicted gene, 49225
Gm9298 14 99629756 to 99630666 910 - pseudogene predicted gene 9298
Gm33880 14 99635297 to 99640846 5549 + lncRNA gene predicted gene, 33880
Gm34061 14 99676983 to 99689318 12335 + lncRNA gene predicted gene, 34061
Tssr4506 14 99697781 to 99697784 3 + TSS region transcription start site region 4506
Gm37093 14 99747465 to 99792773 45308 - unclassified gene predicted gene, 37093
Tssr126895 14 99759608 to 99759614 6 + TSS region transcription start site region 126895
Gm22970 14 99773623 to 99773808 185 - snRNA gene predicted gene, 22970
Cpgi6802 14 99809012 to 99809253 241 CpG island CpG island 6802
Gm5958 14 99835518 to 99835814 296 - pseudogene predicted pseudogene 5958
D14Mit144 14 99924828 to 99925025 197 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 144
Bw40 14 99924828 to 99925025 197 QTL body weight QTL 40
2810416A17Rik 14 99936885 to 99938036 1151 unclassified gene RIKEN cDNA 2810416A17 gene
D14Mit264.2 14 99955814 to 99955951 137 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 264.2
D14Mit104 14 99975602 to 99975729 127 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 104
C130057G02Rik 14 100091719 to 100092742 1023 unclassified gene RIKEN cDNA C130057G02 gene
Tssr130007 14 100109802 to 100109811 9 - TSS region transcription start site region 130007
Tssr130008 14 100165107 to 100165109 2 - TSS region transcription start site region 130008
D14Mit106 14 100181105 to 100181417 312 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 106
Tssr130009 14 100189576 to 100189587 11 - TSS region transcription start site region 130009
Tssr130010 14 100208812 to 100208816 4 - TSS region transcription start site region 130010
4930517O19Rik 14 100213142 to 100245339 32197 + antisense lncRNA gene RIKEN cDNA 4930517O19 gene
Tssr126896 14 100213176 to 100213181 5 + TSS region transcription start site region 126896
Tssr126897 14 100213183 to 100213194 11 + TSS region transcription start site region 126897
Gm16260 14 100219486 to 100219789 303 + pseudogene predicted gene 16260
Tssr130011 14 100243050 to 100243057 7 - TSS region transcription start site region 130011
Tssr130012 14 100284219 to 100284222 3 - TSS region transcription start site region 130012
Cpgi6803 14 100284240 to 100286377 2137 CpG island CpG island 6803
Tssr130013 14 100284453 to 100284498 45 - TSS region transcription start site region 130013
Tssr130014 14 100284665 to 100284689 24 - TSS region transcription start site region 130014
Klf12 14 100284679 to 99870632 -414047 - protein coding gene Kruppel-like factor 12
Tssr130015 14 100284693 to 100284728 35 - TSS region transcription start site region 130015
Tssr130016 14 100284817 to 100284849 32 - TSS region transcription start site region 130016
Tssr130017 14 100284856 to 100284879 23 - TSS region transcription start site region 130017
Tssr130018 14 100284919 to 100284942 23 - TSS region transcription start site region 130018
Tssr130019 14 100284947 to 100284992 45 - TSS region transcription start site region 130019
Tssr126898 14 100285177 to 100285192 15 + TSS region transcription start site region 126898
Gm41231 14 100286165 to 100292575 6410 + lincRNA gene predicted gene, 41231
Gm34199 14 100417359 to 100492226 74867 + lncRNA gene predicted gene, 34199
Gm26367 14 100418483 to 100418614 131 + snoRNA gene predicted gene, 26367
6330576A10Rik 14 100459423 to 100479525 20102 + lincRNA gene RIKEN cDNA 6330576A10 gene
Tssr130020 14 100482219 to 100482260 41 - TSS region transcription start site region 130020
Gm9302 14 100519583 to 100520227 644 - pseudogene predicted gene 9302
Gm24345 14 100525244 to 100525367 123 - snoRNA gene predicted gene, 24345
Gm49237 14 100558632 to 100560670 2038 + lincRNA gene predicted gene, 49237
Tssr130021 14 100619356 to 100619363 7 - TSS region transcription start site region 130021
Gm49238 14 100655761 to 100662533 6772 + unclassified gene predicted gene, 49238
Gm22401 14 100700621 to 100700737 116 + miRNA gene predicted gene, 22401
Gm46483 14 100731111 to 100737204 6093 - lncRNA gene predicted gene, 46483
Cpgi6804 14 100750341 to 100750504 163 CpG island CpG island 6804
Gm23538 14 100760168 to 100760268 100 - snRNA gene predicted gene, 23538