Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:96791853-99164765

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm18926 14 96890737 to 96891519 782 - pseudogene predicted gene, 18926
Gm20592 14 96906914 to 96907683 769 - pseudogene predicted gene, 20592
Gm49007 14 96924633 to 96992293 67660 - lincRNA gene predicted gene, 49007
Gm24770 14 96945019 to 96945110 91 + snoRNA gene predicted gene, 24770
Gm9287 14 96967825 to 96969754 1929 + pseudogene predicted gene 9287
Gm33525 14 97042987 to 97052955 9968 - lincRNA gene predicted gene, 33525
Gm27441 14 97049481 to 97049585 104 - miRNA gene predicted gene, 27441
Tssr129982 14 97052953 to 97052962 9 - TSS region transcription start site region 129982
Gm23276 14 97336495 to 97336632 137 - snoRNA gene predicted gene, 23276
Tssr129983 14 97515457 to 97515460 3 - TSS region transcription start site region 129983
Gm9290 14 97665675 to 97666291 616 - pseudogene predicted gene 9290
Dach1 14 97786853 to 98169765 382912 - protein coding gene dachshund family transcription factor 1
9430027J11Rik 14 97808304 to 97811130 2826 unclassified gene RIKEN cDNA 9430027J11 gene
D14Mit272 14 97837717 to 97837840 123 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-272
D14Mit73 14 97862367 to 97862541 174 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 73
8430437N05Rik 14 97953659 to 97954588 929 unclassified non-coding RNA gene RIKEN cDNA 8430437N05 gene
Gm25831 14 97967829 to 97967991 162 - snRNA gene predicted gene, 25831
Tssr129984 14 98068602 to 98068605 3 - TSS region transcription start site region 129984
4833428M15Rik 14 98084711 to 98086731 2020 unclassified gene RIKEN cDNA 4833428M15 gene
Tssr129985 14 98104570 to 98104578 8 - TSS region transcription start site region 129985
Tssr129986 14 98104911 to 98104914 3 - TSS region transcription start site region 129986
Tssr4504 14 98110028 to 98110037 9 - TSS region transcription start site region 4504
Tssr129987 14 98110055 to 98110065 10 - TSS region transcription start site region 129987
Tssr126865 14 98110219 to 98110244 25 + TSS region transcription start site region 126865
Gm16331 14 98118509 to 98119006 497 + pseudogene predicted gene 16331
A730014G21Rik 14 98141084 to 98142657 1573 unclassified gene RIKEN cDNA A730014G21 gene
Tssr129988 14 98159780 to 98159795 15 - TSS region transcription start site region 129988
D14Mit1004 14 98167097 to 98167226 129 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 1004
Tssr126866 14 98167403 to 98167430 27 + TSS region transcription start site region 126866
Cpgi6797 14 98167592 to 98169737 2145 CpG island CpG island 6797
Tssr126867 14 98167886 to 98167899 13 + TSS region transcription start site region 126867
Tssr129989 14 98169091 to 98169102 11 - TSS region transcription start site region 129989
Tssr129990 14 98169208 to 98169263 55 - TSS region transcription start site region 129990
Tssr129991 14 98169283 to 98169297 14 - TSS region transcription start site region 129991
Tssr129992 14 98169313 to 98169342 29 - TSS region transcription start site region 129992
Tssr129993 14 98169464 to 98169479 15 - TSS region transcription start site region 129993
Tssr129994 14 98169542 to 98169595 53 - TSS region transcription start site region 129994
Tssr129995 14 98169603 to 98169618 15 - TSS region transcription start site region 129995
Tssr129996 14 98169752 to 98169806 54 - TSS region transcription start site region 129996
Tssr129997 14 98169811 to 98169840 29 - TSS region transcription start site region 129997
Gm33583 14 98170276 to 98180476 10200 + lncRNA gene predicted gene, 33583
Gm26006 14 98260745 to 98260825 80 - snoRNA gene predicted gene, 26006
Gm46477 14 98273849 to 98274269 420 - pseudogene predicted gene, 46477
Gm49017 14 98519416 to 98519700 284 - pseudogene predicted gene, 49017
Tssr126868 14 98577413 to 98577420 7 + TSS region transcription start site region 126868
Gm26139 14 98624190 to 98624296 106 + snRNA gene predicted gene, 26139
Gm27034 14 98714813 to 98715752 939 + pseudogene predicted gene, 27034
Gm46478 14 98861656 to 98873297 11641 - lncRNA gene predicted gene, 46478
Tssr126869 14 98874572 to 98874575 3 + TSS region transcription start site region 126869
Gm49018 14 98887974 to 98920945 32971 - lincRNA gene predicted gene, 49018
Tssr126870 14 98905127 to 98905143 16 + TSS region transcription start site region 126870
Gm41228 14 98905130 to 98968903 63773 + lncRNA gene predicted gene, 41228
Tssr129998 14 98920897 to 98920900 3 - TSS region transcription start site region 129998
Gm18148 14 98922654 to 98923527 873 + pseudogene predicted gene, 18148
Rpl36a-ps1 14 98993870 to 98994318 448 - pseudogene ribosomal protein L36A, pseudogene 1
Tssr129999 14 98994324 to 98994335 11 - TSS region transcription start site region 129999
Mzt1 14 99034544 to 99046134 11590 - protein coding gene mitotic spindle organizing protein 1
Cpgi6798 14 99045405 to 99046679 1274 CpG island CpG island 6798
Tssr130000 14 99046055 to 99046098 43 - TSS region transcription start site region 130000
Tssr130001 14 99046110 to 99046141 31 - TSS region transcription start site region 130001
Bora 14 99046247 to 99074540 28293 + protein coding gene bora, aurora kinase A activator
Tssr126871 14 99046376 to 99046381 5 + TSS region transcription start site region 126871
Tssr126872 14 99046406 to 99046429 23 + TSS region transcription start site region 126872
Tssr126873 14 99046434 to 99046463 29 + TSS region transcription start site region 126873
Dis3 14 99075206 to 99099770 24564 - protein coding gene DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
Tssr130002 14 99090156 to 99090168 12 - TSS region transcription start site region 130002
Cpgi6799 14 99099281 to 99100132 851 CpG island CpG island 6799
Pibf1 14 99099424 to 99254493 155069 + protein coding gene progesterone immunomodulatory binding factor 1
Tssr126874 14 99099468 to 99099476 8 + TSS region transcription start site region 126874
Tssr130003 14 99099701 to 99099785 84 - TSS region transcription start site region 130003
Tssr126875 14 99099876 to 99099962 86 + TSS region transcription start site region 126875
Tssr126876 14 99099988 to 99100012 24 + TSS region transcription start site region 126876
Tssr126877 14 99100016 to 99100028 12 + TSS region transcription start site region 126877
Gm49026 14 99111677 to 99112814 1137 + unclassified gene predicted gene, 49026
Tssr4505 14 99147867 to 99147868 1 + TSS region transcription start site region 4505