Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:9145092-11567035

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr124254 14 9156970 to 9156972 2 + TSS region transcription start site region 124254
Gm48370 14 9400624 to 9459180 58556 + lincRNA gene predicted gene, 48370
Gm48371 14 9443375 to 9469555 26180 - lincRNA gene predicted gene, 48371
Gm41097 14 9448523 to 9502368 53845 + lncRNA gene predicted gene, 41097
Gm41096 14 9502091 to 9529387 27296 - lncRNA gene predicted gene, 41096
Tssr127440 14 9529351 to 9529368 17 - TSS region transcription start site region 127440
Tssr127441 14 9560883 to 9560905 22 - TSS region transcription start site region 127441
Tssr127442 14 9634364 to 9634398 34 - TSS region transcription start site region 127442
Tssr4247 14 9658569 to 9658570 1 + TSS region transcription start site region 4247
Hmgb3-ps 14 9863078 to 9863654 576 + pseudogene Hmgb3 retrotransposed pseudogene
Mnd1-ps 14 9884195 to 9886768 2573 + pseudogene Mnd1 retrotransposed pseudogene
Tssr124255 14 9885959 to 9885996 37 + TSS region transcription start site region 124255
Gm48438 14 9901921 to 9904368 2447 - unclassified gene predicted gene, 48438
Tssr4248 14 9955748 to 9955752 4 - TSS region transcription start site region 4248
D14Mit229 14 9961277 to 9961394 117 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 229
Gm48430 14 10017223 to 10018671 1448 - unclassified gene predicted gene, 48430
Tssr127443 14 10176658 to 10176660 2 - TSS region transcription start site region 127443
Gm48439 14 10178620 to 10186051 7431 + antisense lncRNA gene predicted gene, 48439
Tssr127444 14 10204618 to 10204652 34 - TSS region transcription start site region 127444
Tssr127445 14 10278005 to 10278010 5 - TSS region transcription start site region 127445
Tssr127446 14 10331851 to 10331859 8 - TSS region transcription start site region 127446
Gm48442 14 10377697 to 10379948 2251 - unclassified gene predicted gene, 48442
Tssr127447 14 10453408 to 10453430 22 - TSS region transcription start site region 127447
Tssr127448 14 10453443 to 10453467 24 - TSS region transcription start site region 127448
Gm22053 14 10478674 to 10478873 199 + snoRNA gene predicted gene, 22053
D14Mit132 14 10497633 to 10497764 131 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 132
Fhitos 14 10738553 to 10779001 40448 + antisense lncRNA gene fragile histidine triad gene, opposite strand
Gm48437 14 10779067 to 10780448 1381 - unclassified gene predicted gene, 48437
Tssr124256 14 11122754 to 11122756 2 + TSS region transcription start site region 124256
Cpgi6161 14 11161649 to 11162201 552 CpG island CpG island 6161
Tssr127449 14 11162008 to 11162041 33 - TSS region transcription start site region 127449
Fhit 14 11162035 to 9550092 -1611943 - protein coding gene fragile histidine triad gene
Slc25a5-ps 14 11179630 to 11180888 1258 + pseudogene Slc25a5 retrotransposed pseudogene
D14Mit245 14 11217344 to 11217450 106 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-245
Tssr124257 14 11227511 to 11227514 3 + TSS region transcription start site region 124257
Rpl21-ps4 14 11227552 to 11227989 437 + pseudogene ribosomal protein L21, pseudogene 4
Cpgi6162 14 11236020 to 11236220 200 CpG island CpG island 6162
Gm3839 14 11280751 to 11281951 1200 - protein coding gene predicted pseudogene 3839
Mir5124b 14 11282477 to 11282561 84 + miRNA gene microRNA 5124b
Tssr4249 14 11317527 to 11317534 7 + TSS region transcription start site region 4249
Tssr127450 14 11335043 to 11335051 8 - TSS region transcription start site region 127450
Gm25466 14 11335873 to 11336004 131 + snoRNA gene predicted gene, 25466
D14Mit1 14 11369444 to 11369550 106 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 1
Gm48592 14 11392560 to 11392925 365 + pseudogene predicted gene, 48592
Gm48594 14 11460359 to 11502992 42633 + lincRNA gene predicted gene, 48594
Gm8438 14 11491076 to 11491657 581 - pseudogene predicted gene 8438
Gm48595 14 11510535 to 11520770 10235 - lincRNA gene predicted gene, 48595
Cpgi6163 14 11552671 to 11555315 2644 CpG island CpG island 6163
Tssr124258 14 11553461 to 11553484 23 + TSS region transcription start site region 124258
Tssr124259 14 11553499 to 11553514 15 + TSS region transcription start site region 124259
Tssr124260 14 11553523 to 11553542 19 + TSS region transcription start site region 124260
Ptprg 14 11553553 to 12242040 688487 + protein coding gene protein tyrosine phosphatase, receptor type, G
Bomd2 14 11553553 to 12242040 688487 QTL bone mineral density 2
Tssr124261 14 11553555 to 11553564 9 + TSS region transcription start site region 124261
Tssr124262 14 11553568 to 11553597 29 + TSS region transcription start site region 124262
Tssr124263 14 11553598 to 11553615 17 + TSS region transcription start site region 124263
Tssr124264 14 11553702 to 11553773 71 + TSS region transcription start site region 124264
Cpgi6164 14 11555654 to 11555906 252 CpG island CpG island 6164
Cpgi6165 14 11556281 to 11556747 466 CpG island CpG island 6165