Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:8645748-11265752

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930452B06Rik 14 8431192 to 8666240 235048 - protein coding gene RIKEN cDNA 4930452B06 gene
Cpgi6160 14 8665926 to 8666481 555 CpG island CpG island 6160
Tssr127437 14 8666203 to 8666235 32 - TSS region transcription start site region 127437
Tssr127438 14 8666236 to 8666279 43 - TSS region transcription start site region 127438
Tssr124252 14 8666349 to 8666360 11 + TSS region transcription start site region 124252
Tssr124253 14 8666369 to 8666413 44 + TSS region transcription start site region 124253
4930455B14Rik 14 8666390 to 8673378 6988 + lincRNA gene RIKEN cDNA 4930455B14 gene
Gm20241 14 8687419 to 8687909 490 + pseudogene predicted gene, 20241
Gm9800 14 8800000 to 8800335 335 - pseudogene predicted gene 9800
Tssr127439 14 8800517 to 8800519 2 - TSS region transcription start site region 127439
Gm48364 14 8858989 to 8860050 1061 - pseudogene predicted gene, 48364
Gm18071 14 8925472 to 8926180 708 - pseudogene predicted gene, 18071
Tssr124254 14 9156970 to 9156972 2 + TSS region transcription start site region 124254
Gm48370 14 9400624 to 9459180 58556 + lincRNA gene predicted gene, 48370
Gm48371 14 9443375 to 9469555 26180 - lincRNA gene predicted gene, 48371
Gm41097 14 9448523 to 9502368 53845 + lncRNA gene predicted gene, 41097
Gm41096 14 9502091 to 9529387 27296 - lncRNA gene predicted gene, 41096
Tssr127440 14 9529351 to 9529368 17 - TSS region transcription start site region 127440
Tssr127441 14 9560883 to 9560905 22 - TSS region transcription start site region 127441
Tssr127442 14 9634364 to 9634398 34 - TSS region transcription start site region 127442
Tssr4247 14 9658569 to 9658570 1 + TSS region transcription start site region 4247
Hmgb3-ps 14 9863078 to 9863654 576 + pseudogene Hmgb3 retrotransposed pseudogene
Mnd1-ps 14 9884195 to 9886768 2573 + pseudogene Mnd1 retrotransposed pseudogene
Tssr124255 14 9885959 to 9885996 37 + TSS region transcription start site region 124255
Gm48438 14 9901921 to 9904368 2447 - unclassified gene predicted gene, 48438
Tssr4248 14 9955748 to 9955752 4 - TSS region transcription start site region 4248
D14Mit229 14 9961277 to 9961394 117 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 229
Gm48430 14 10017223 to 10018671 1448 - unclassified gene predicted gene, 48430
Tssr127443 14 10176658 to 10176660 2 - TSS region transcription start site region 127443
Gm48439 14 10178620 to 10186051 7431 + antisense lncRNA gene predicted gene, 48439
Tssr127444 14 10204618 to 10204652 34 - TSS region transcription start site region 127444
Tssr127445 14 10278005 to 10278010 5 - TSS region transcription start site region 127445
Tssr127446 14 10331851 to 10331859 8 - TSS region transcription start site region 127446
Gm48442 14 10377697 to 10379948 2251 - unclassified gene predicted gene, 48442
Tssr127447 14 10453408 to 10453430 22 - TSS region transcription start site region 127447
Tssr127448 14 10453443 to 10453467 24 - TSS region transcription start site region 127448
Gm22053 14 10478674 to 10478873 199 + snoRNA gene predicted gene, 22053
D14Mit132 14 10497633 to 10497764 131 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 132
Fhitos 14 10738553 to 10779001 40448 + antisense lncRNA gene fragile histidine triad gene, opposite strand
Gm48437 14 10779067 to 10780448 1381 - unclassified gene predicted gene, 48437
Tssr124256 14 11122754 to 11122756 2 + TSS region transcription start site region 124256
Cpgi6161 14 11161649 to 11162201 552 CpG island CpG island 6161
Tssr127449 14 11162008 to 11162041 33 - TSS region transcription start site region 127449
Fhit 14 11162035 to 9550092 -1611943 - protein coding gene fragile histidine triad gene
Slc25a5-ps 14 11179630 to 11180888 1258 + pseudogene Slc25a5 retrotransposed pseudogene
D14Mit245 14 11217344 to 11217450 106 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-245
Tssr124257 14 11227511 to 11227514 3 + TSS region transcription start site region 124257
Rpl21-ps4 14 11227552 to 11227989 437 + pseudogene ribosomal protein L21, pseudogene 4
Cpgi6162 14 11236020 to 11236220 200 CpG island CpG island 6162