Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 14:8058835-8458840

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87 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm52100 14 8060488 to 8063541 3053 - lncRNA gene predicted gene, 52100
Tssr124231 14 8063241 to 8063261 20 + TSS region transcription start site region 124231
A230065C20Rik 14 8063259 to 8065244 1985 lncRNA gene RIKEN cDNA A230065C20 gene
Cpgi6155 14 8080138 to 8080956 818 CpG island CpG island 6155
Htd2 14 8080313 to 8091846 11533 + protein coding gene hydroxyacyl-thioester dehydratase type 2
Tssr124232 14 8080315 to 8080385 70 + TSS region transcription start site region 124232
Rpp14 14 8080367 to 8091834 11467 + protein coding gene ribonuclease P 14 subunit
Tssr124233 14 8080386 to 8080399 13 + TSS region transcription start site region 124233
Tssr124234 14 8095770 to 8095817 47 + TSS region transcription start site region 124234
Cpgi6156 14 8097884 to 8098798 914 CpG island CpG island 6156
Tssr124235 14 8098196 to 8098296 100 + TSS region transcription start site region 124235
Pxk 14 8098211 to 8165117 66906 + protein coding gene PX domain containing serine/threonine kinase
Tssr4245 14 8099599 to 8099614 15 - TSS region transcription start site region 4245
Tssr127397 14 8114396 to 8114436 40 - TSS region transcription start site region 127397
Tssr124236 14 8118160 to 8118171 11 + TSS region transcription start site region 124236
Tssr124237 14 8118172 to 8118187 15 + TSS region transcription start site region 124237
Tssr124238 14 8118213 to 8118220 7 + TSS region transcription start site region 124238
Tssr124239 14 8125243 to 8125245 2 + TSS region transcription start site region 124239
Gm18144 14 8125246 to 8125905 659 + pseudogene predicted gene, 18144
D14Mit110 14 8159438 to 8159575 137 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 110
Pdhb 14 8165996 to 8173025 7029 - protein coding gene pyruvate dehydrogenase (lipoamide) beta
Cpgi6157 14 8172448 to 8173438 990 CpG island CpG island 6157
Tssr127398 14 8172958 to 8172977 19 - TSS region transcription start site region 127398
Tssr127399 14 8172986 to 8173003 17 - TSS region transcription start site region 127399
Cpgi6158 14 8213645 to 8214861 1216 CpG island CpG island 6158
Tssr124240 14 8213997 to 8214039 42 + TSS region transcription start site region 124240
Tssr124241 14 8214135 to 8214181 46 + TSS region transcription start site region 124241
Kctd6 14 8214140 to 8223563 9423 + protein coding gene potassium channel tetramerisation domain containing 6
Tssr124242 14 8214199 to 8214209 10 + TSS region transcription start site region 124242
Acox2 14 8225511 to 8259019 33508 - protein coding gene acyl-Coenzyme A oxidase 2, branched chain
D14Mit276 14 8241582 to 8241700 118 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-276
D14Dcr14 14 8250914 to 8251015 101 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 14
Tssr127400 14 8258037 to 8258062 25 - TSS region transcription start site region 127400
Tssr127401 14 8258068 to 8258098 30 - TSS region transcription start site region 127401
Tssr127402 14 8258800 to 8258813 13 - TSS region transcription start site region 127402
Tssr4246 14 8258835 to 8258840 5 - TSS region transcription start site region 4246
Tssr127403 14 8258881 to 8258903 22 - TSS region transcription start site region 127403
Tssr127404 14 8258910 to 8258954 44 - TSS region transcription start site region 127404
Tssr127405 14 8258961 to 8258977 16 - TSS region transcription start site region 127405
Tssr127406 14 8258979 to 8258991 12 - TSS region transcription start site region 127406
Tssr127407 14 8258996 to 8259001 5 - TSS region transcription start site region 127407
Tssr127408 14 8259007 to 8259024 17 - TSS region transcription start site region 127408
Tssr127409 14 8259262 to 8259283 21 - TSS region transcription start site region 127409
Tssr127410 14 8259291 to 8259313 22 - TSS region transcription start site region 127410
Tssr127411 14 8259325 to 8259378 53 - TSS region transcription start site region 127411
Fam107a 14 8296270 to 8317607 21337 - protein coding gene family with sequence similarity 107, member A
D14Mit146.2 14 8296926 to 8297088 162 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 146.2
D14Mit146 14 8297063 to 8297197 134 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 146
Tssr127412 14 8297110 to 8297136 26 - TSS region transcription start site region 127412
Tssr127413 14 8298095 to 8298105 10 - TSS region transcription start site region 127413
Tssr127414 14 8298366 to 8298375 9 - TSS region transcription start site region 127414
Tssr124243 14 8299572 to 8299582 10 + TSS region transcription start site region 124243
Tssr127415 14 8299629 to 8299665 36 - TSS region transcription start site region 127415
Tssr127416 14 8309678 to 8309725 47 - TSS region transcription start site region 127416
Tssr127417 14 8309734 to 8309745 11 - TSS region transcription start site region 127417
Tssr127418 14 8309770 to 8309784 14 - TSS region transcription start site region 127418
C530034L13Rik 14 8317163 to 8319868 2705 lncRNA gene RIKEN cDNA C530034L13 gene
Cpgi6159 14 8317170 to 8317796 626 CpG island CpG island 6159
Tssr127419 14 8317596 to 8317604 8 - TSS region transcription start site region 127419
Tssr127420 14 8317613 to 8317627 14 - TSS region transcription start site region 127420
Tssr127421 14 8317818 to 8317829 11 - TSS region transcription start site region 127421
Tssr127422 14 8317858 to 8317881 23 - TSS region transcription start site region 127422
Tssr127423 14 8318033 to 8318054 21 - TSS region transcription start site region 127423
Tssr124244 14 8332446 to 8332453 7 + TSS region transcription start site region 124244
Oit1 14 8348937 to 8378754 29817 - protein coding gene oncoprotein induced transcript 1
Tssr127424 14 8360339 to 8360362 23 - TSS region transcription start site region 127424
Tssr127425 14 8367246 to 8367257 11 - TSS region transcription start site region 127425
Tssr127426 14 8367261 to 8367280 19 - TSS region transcription start site region 127426
Tssr127427 14 8367281 to 8367297 16 - TSS region transcription start site region 127427
Tssr124245 14 8367370 to 8367390 20 + TSS region transcription start site region 124245
Tssr124246 14 8367412 to 8367419 7 + TSS region transcription start site region 124246
2610318M16Rik 14 8367440 to 8371010 3570 + lncRNA gene RIKEN cDNA 2610318M16 gene
Tssr127428 14 8368120 to 8368136 16 - TSS region transcription start site region 127428
Tssr127429 14 8368149 to 8368157 8 - TSS region transcription start site region 127429
Tssr124247 14 8368235 to 8368255 20 + TSS region transcription start site region 124247
Tssr124248 14 8368256 to 8368265 9 + TSS region transcription start site region 124248
Tssr124249 14 8368272 to 8368281 9 + TSS region transcription start site region 124249
Tssr127430 14 8378700 to 8378705 5 - TSS region transcription start site region 127430
Tssr127431 14 8378727 to 8378751 24 - TSS region transcription start site region 127431
Tssr127432 14 8378753 to 8378804 51 - TSS region transcription start site region 127432
Tssr127433 14 8378821 to 8378846 25 - TSS region transcription start site region 127433
Tssr127434 14 8378851 to 8378870 19 - TSS region transcription start site region 127434
Tssr127435 14 8378890 to 8378897 7 - TSS region transcription start site region 127435
Tssr127436 14 8378899 to 8378923 24 - TSS region transcription start site region 127436
Gm41095 14 8379105 to 8447040 67935 + lncRNA gene predicted gene, 41095
Gm8416 14 8408915 to 8410193 1278 + pseudogene predicted gene 8416
Cfap20dc 14 8431192 to 8666240 235048 - protein coding gene CFAP20 domain containing