Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:79552521-80302627

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Elf1 14 79481194 to 79582491 101297 + protein coding gene E74-like factor 1
Gm27857 14 79562167 to 79562292 125 - miRNA gene predicted gene, 27857
Cpgi6780 14 79587098 to 79588005 907 CpG island CpG island 6780
Tssr126814 14 79587654 to 79587668 14 + TSS region transcription start site region 126814
Tssr126815 14 79587670 to 79587679 9 + TSS region transcription start site region 126815
Sugt1 14 79587691 to 79629755 42064 + protein coding gene SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
Tssr126816 14 79587700 to 79587712 12 + TSS region transcription start site region 126816
Tssr126817 14 79587726 to 79587797 71 + TSS region transcription start site region 126817
Tssr126818 14 79587799 to 79587820 21 + TSS region transcription start site region 126818
Tssr126819 14 79619736 to 79619770 34 + TSS region transcription start site region 126819
Cnmd 14 79637690 to 79662170 24480 - protein coding gene chondromodulin
Tssr129916 14 79642140 to 79642151 11 - TSS region transcription start site region 129916
Cpgi6781 14 79656392 to 79656592 200 CpG island CpG island 6781
Tssr4492 14 79660737 to 79660745 8 + TSS region transcription start site region 4492
Cpgi6782 14 79661230 to 79661696 466 CpG island CpG island 6782
Tssr129917 14 79662090 to 79662101 11 - TSS region transcription start site region 129917
Tssr129918 14 79662107 to 79662112 5 - TSS region transcription start site region 129918
Tssr129919 14 79662119 to 79662145 26 - TSS region transcription start site region 129919
Tssr129920 14 79662148 to 79662173 25 - TSS region transcription start site region 129920
Gm41218 14 79662933 to 79694952 32019 + lncRNA gene predicted gene, 41218
Cpgi6783 14 79677101 to 79677304 203 CpG island CpG island 6783
Gm49042 14 79695037 to 79702410 7373 - lincRNA gene predicted gene, 49042
Tssr126820 14 79702890 to 79702904 14 + TSS region transcription start site region 126820
4930452G13Rik 14 79702920 to 79712930 10010 + lincRNA gene RIKEN cDNA 4930452G13 gene
Tssr4493 14 79703738 to 79703749 11 + TSS region transcription start site region 4493
Tssr129921 14 79704028 to 79704073 45 - TSS region transcription start site region 129921
Tssr126821 14 79704071 to 79704082 11 + TSS region transcription start site region 126821
Tssr126822 14 79704088 to 79704099 11 + TSS region transcription start site region 126822
Tssr126823 14 79704302 to 79704312 10 + TSS region transcription start site region 126823
Mir759 14 79738431 to 79738528 97 + miRNA gene microRNA 759
Pcdh8 14 79766775 to 79771312 4537 - protein coding gene protocadherin 8
Cpgi6784 14 79768040 to 79771468 3428 CpG island CpG island 6784
Tssr126824 14 79769886 to 79769897 11 + TSS region transcription start site region 126824
Tssr126825 14 79769898 to 79769910 12 + TSS region transcription start site region 126825
Gm9748 14 79769908 to 79772743 2835 + antisense lncRNA gene predicted gene 9748
Tssr126826 14 79769917 to 79769922 5 + TSS region transcription start site region 126826
Tssr126827 14 79769926 to 79769935 9 + TSS region transcription start site region 126827
Tssr129922 14 79771305 to 79771318 13 - TSS region transcription start site region 129922
Cpgi6785 14 79773810 to 79774427 617 CpG island CpG island 6785
D14Mit117 14 79794579 to 79794728 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 117
Gm10845 14 79860521 to 79869176 8655 - lincRNA gene predicted gene 10845
Tssr126828 14 79875568 to 79875600 32 + TSS region transcription start site region 126828
Gm6999 14 79890972 to 79984136 93164 + lincRNA gene predicted gene 6999
Tssr126829 14 79891092 to 79891103 11 + TSS region transcription start site region 126829
Tssr126830 14 79898441 to 79898448 7 + TSS region transcription start site region 126830
Gm49542 14 79898467 to 79907230 8763 + lincRNA gene predicted gene, 49542
D14Mit162.2 14 79927427 to 79927551 124 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 162.2
D14Mit162 14 79927521 to 79927627 106 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 162
Gm18605 14 79947679 to 79948279 600 + pseudogene predicted gene, 18605
Olfm4 14 80000153 to 80022874 22721 + protein coding gene olfactomedin 4
Tssr126831 14 80000292 to 80000309 17 + TSS region transcription start site region 126831
Tssr126832 14 80006218 to 80006250 32 + TSS region transcription start site region 126832
Tssr126833 14 80006267 to 80006276 9 + TSS region transcription start site region 126833
Tssr126834 14 80021209 to 80021217 8 + TSS region transcription start site region 126834
Tssr126835 14 80021280 to 80021291 11 + TSS region transcription start site region 126835
Tssr126836 14 80021422 to 80021430 8 + TSS region transcription start site region 126836
Tssr126837 14 80022160 to 80022180 20 + TSS region transcription start site region 126837
Tssr126838 14 80022231 to 80022240 9 + TSS region transcription start site region 126838
Tssr126839 14 80022324 to 80022339 15 + TSS region transcription start site region 126839
Tssr126840 14 80022560 to 80022567 7 + TSS region transcription start site region 126840
Tssr126841 14 80022709 to 80022718 9 + TSS region transcription start site region 126841
D14Mit74 14 80028196 to 80028342 146 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 74
Gm17923 14 80214958 to 80216359 1401 + pseudogene predicted gene, 17923
Gm31776 14 80245092 to 80260936 15844 + lncRNA gene predicted gene, 31776
Gm46473 14 80270045 to 80343787 73742 + lncRNA gene predicted gene, 46473