Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:79447098-79728005

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi6778 14 79451733 to 79452038 305 CpG island CpG island 6778
Tssr126792 14 79451791 to 79451840 49 + TSS region transcription start site region 126792
Kbtbd6 14 79451835 to 79454816 2981 + protein coding gene kelch repeat and BTB (POZ) domain containing 6
Tssr126793 14 79451939 to 79451951 12 + TSS region transcription start site region 126793
Wbp4 14 79459937 to 79481268 21331 - protein coding gene WW domain binding protein 4
Tssr129903 14 79467378 to 79467399 21 - TSS region transcription start site region 129903
Tssr129904 14 79467409 to 79467426 17 - TSS region transcription start site region 129904
Tssr129905 14 79470133 to 79470174 41 - TSS region transcription start site region 129905
Cpgi6779 14 79480655 to 79482314 1659 CpG island CpG island 6779
Tssr129906 14 79480968 to 79480977 9 - TSS region transcription start site region 129906
Tssr129907 14 79480995 to 79481020 25 - TSS region transcription start site region 129907
Tssr129908 14 79481024 to 79481076 52 - TSS region transcription start site region 129908
Tssr126794 14 79481164 to 79481185 21 + TSS region transcription start site region 126794
Elf1 14 79481194 to 79582491 101297 + protein coding gene E74-like factor 1
Tssr129909 14 79481415 to 79481449 34 - TSS region transcription start site region 129909
Tssr129910 14 79481450 to 79481514 64 - TSS region transcription start site region 129910
Tssr126795 14 79481523 to 79481608 85 + TSS region transcription start site region 126795
n-TEttc4 14 79481668 to 79481739 71 + tRNA gene nuclear encoded tRNA glutamic acid 4 (anticodon TTC)
Tssr129911 14 79482381 to 79482396 15 - TSS region transcription start site region 129911
Gm9243 14 79486665 to 79529900 43235 + pseudogene predicted gene 9243
Tssr126796 14 79515618 to 79515694 76 + TSS region transcription start site region 126796
Tssr126797 14 79515695 to 79515707 12 + TSS region transcription start site region 126797
Tssr126798 14 79515714 to 79515732 18 + TSS region transcription start site region 126798
Tssr126799 14 79516422 to 79516445 23 + TSS region transcription start site region 126799
Tssr126800 14 79516568 to 79516573 5 + TSS region transcription start site region 126800
Tssr129912 14 79521856 to 79521869 13 - TSS region transcription start site region 129912
Tssr126801 14 79521957 to 79521974 17 + TSS region transcription start site region 126801
Tssr129913 14 79526177 to 79526180 3 - TSS region transcription start site region 129913
Tssr129914 14 79526222 to 79526239 17 - TSS region transcription start site region 129914
Tssr126802 14 79530673 to 79530687 14 + TSS region transcription start site region 126802
Tssr126803 14 79530692 to 79530707 15 + TSS region transcription start site region 126803
Tssr126804 14 79535535 to 79535576 41 + TSS region transcription start site region 126804
Tssr126805 14 79535577 to 79535591 14 + TSS region transcription start site region 126805
Tssr126806 14 79535596 to 79535607 11 + TSS region transcription start site region 126806
Tssr126807 14 79535640 to 79535654 14 + TSS region transcription start site region 126807
Tssr129915 14 79535675 to 79535678 3 - TSS region transcription start site region 129915
Tssr126808 14 79535762 to 79535773 11 + TSS region transcription start site region 126808
Tssr126809 14 79536226 to 79536236 10 + TSS region transcription start site region 126809
Tssr126810 14 79536336 to 79536341 5 + TSS region transcription start site region 126810
Tssr126811 14 79539881 to 79539891 10 + TSS region transcription start site region 126811
Tssr126812 14 79540193 to 79540204 11 + TSS region transcription start site region 126812
Tssr126813 14 79549396 to 79549443 47 + TSS region transcription start site region 126813
Gm27857 14 79562167 to 79562292 125 - miRNA gene predicted gene, 27857
Cpgi6780 14 79587098 to 79588005 907 CpG island CpG island 6780
Tssr126814 14 79587654 to 79587668 14 + TSS region transcription start site region 126814
Tssr126815 14 79587670 to 79587679 9 + TSS region transcription start site region 126815
Sugt1 14 79587691 to 79629755 42064 + protein coding gene SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
Tssr126816 14 79587700 to 79587712 12 + TSS region transcription start site region 126816
Tssr126817 14 79587726 to 79587797 71 + TSS region transcription start site region 126817
Tssr126818 14 79587799 to 79587820 21 + TSS region transcription start site region 126818
Tssr126819 14 79619736 to 79619770 34 + TSS region transcription start site region 126819
Cnmd 14 79637690 to 79662170 24480 - protein coding gene chondromodulin
Tssr129916 14 79642140 to 79642151 11 - TSS region transcription start site region 129916
Cpgi6781 14 79656392 to 79656592 200 CpG island CpG island 6781
Tssr4492 14 79660737 to 79660745 8 + TSS region transcription start site region 4492
Cpgi6782 14 79661230 to 79661696 466 CpG island CpG island 6782
Tssr129917 14 79662090 to 79662101 11 - TSS region transcription start site region 129917
Tssr129918 14 79662107 to 79662112 5 - TSS region transcription start site region 129918
Tssr129919 14 79662119 to 79662145 26 - TSS region transcription start site region 129919
Tssr129920 14 79662148 to 79662173 25 - TSS region transcription start site region 129920
Gm41218 14 79662933 to 79694952 32019 + lncRNA gene predicted gene, 41218
Cpgi6783 14 79677101 to 79677304 203 CpG island CpG island 6783
Gm49042 14 79695037 to 79702410 7373 - lincRNA gene predicted gene, 49042
Tssr126820 14 79702890 to 79702904 14 + TSS region transcription start site region 126820
4930452G13Rik 14 79702920 to 79712930 10010 + lincRNA gene RIKEN cDNA 4930452G13 gene
Tssr4493 14 79703738 to 79703749 11 + TSS region transcription start site region 4493
Tssr129921 14 79704028 to 79704073 45 - TSS region transcription start site region 129921
Tssr126821 14 79704071 to 79704082 11 + TSS region transcription start site region 126821
Tssr126822 14 79704088 to 79704099 11 + TSS region transcription start site region 126822
Tssr126823 14 79704302 to 79704312 10 + TSS region transcription start site region 126823