Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:78897140-80387151

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169 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vwa8 14 78849056 to 79202310 353254 + protein coding gene von Willebrand factor A domain containing 8
Gm49016 14 78945180 to 78947227 2047 - antisense lncRNA gene predicted gene, 49016
Gm6997 14 78965949 to 78966568 619 - pseudogene predicted gene 6997
Tssr129883 14 78966556 to 78966594 38 - TSS region transcription start site region 129883
Tssr126779 14 78966864 to 78966868 4 + TSS region transcription start site region 126779
Tssr126780 14 79077282 to 79077289 7 + TSS region transcription start site region 126780
Gm49011 14 79105709 to 79105879 170 + pseudogene predicted gene, 49011
Gm30970 14 79106039 to 79106401 362 - lncRNA gene predicted gene, 30970
5730406G12Rik 14 79111334 to 79113256 1922 unclassified gene RIKEN cDNA 5730406G12 gene
Tssr126781 14 79129080 to 79129084 4 + TSS region transcription start site region 126781
Tssr129884 14 79135173 to 79135177 4 - TSS region transcription start site region 129884
Gm49015 14 79146259 to 79151389 5130 - antisense lncRNA gene predicted gene, 49015
Tssr129885 14 79151782 to 79151790 8 - TSS region transcription start site region 129885
Tssr129886 14 79151793 to 79151817 24 - TSS region transcription start site region 129886
D14Mit35 14 79160020 to 79160240 220 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 35
Fembm2 14 79160020 to 79160240 220 QTL femoral bone morphometry 2
Gm18081 14 79174391 to 79175202 811 + pseudogene predicted gene, 18081
Gm4632 14 79178894 to 79199190 20296 - antisense lncRNA gene predicted gene 4632
Tssr126782 14 79180679 to 79180685 6 + TSS region transcription start site region 126782
Tssr129887 14 79199143 to 79199160 17 - TSS region transcription start site region 129887
Tssr129888 14 79199172 to 79199191 19 - TSS region transcription start site region 129888
Tssr129889 14 79199200 to 79199227 27 - TSS region transcription start site region 129889
Zfp957 14 79212355 to 79247367 35012 - protein coding gene zinc finger protein 957
Tssr129890 14 79243615 to 79243625 10 - TSS region transcription start site region 129890
Gm49028 14 79260453 to 79261382 929 + pseudogene predicted gene, 49028
Cpgi6772 14 79267840 to 79267995 155 CpG island CpG island 6772
Rgcc 14 79288750 to 79301635 12885 - protein coding gene regulator of cell cycle
Tssr126783 14 79290212 to 79290251 39 + TSS region transcription start site region 126783
Tssr129891 14 79291990 to 79291998 8 - TSS region transcription start site region 129891
A130038J17Rik 14 79296750 to 79300360 3610 unclassified gene RIKEN cDNA A130038J17 gene
Tssr129892 14 79300315 to 79300318 3 - TSS region transcription start site region 129892
Cpgi6773 14 79300366 to 79301938 1572 CpG island CpG island 6773
Tssr129893 14 79300926 to 79300931 5 - TSS region transcription start site region 129893
Tssr129894 14 79300991 to 79300999 8 - TSS region transcription start site region 129894
Tssr129895 14 79301014 to 79301026 12 - TSS region transcription start site region 129895
Tssr129896 14 79301040 to 79301043 3 - TSS region transcription start site region 129896
Tssr129897 14 79301052 to 79301062 10 - TSS region transcription start site region 129897
Tssr129898 14 79301074 to 79301092 18 - TSS region transcription start site region 129898
1700010B09Rik 14 79301148 to 79302039 891 unclassified gene RIKEN cDNA 1700010B09 gene
Tssr126784 14 79301154 to 79301166 12 + TSS region transcription start site region 126784
Tssr4491 14 79301185 to 79301193 8 + TSS region transcription start site region 4491
Tssr126785 14 79301198 to 79301205 7 + TSS region transcription start site region 126785
Tssr129899 14 79301623 to 79301641 18 - TSS region transcription start site region 129899
Gm46472 14 79303438 to 79310107 6669 - lncRNA gene predicted gene, 46472
Naa16 14 79334507 to 79390777 56270 - protein coding gene N(alpha)-acetyltransferase 16, NatA auxiliary subunit
Tssr129900 14 79389417 to 79389421 4 - TSS region transcription start site region 129900
Cpgi6774 14 79390093 to 79390960 867 CpG island CpG island 6774
Tssr129901 14 79390639 to 79390653 14 - TSS region transcription start site region 129901
Tssr129902 14 79390666 to 79390743 77 - TSS region transcription start site region 129902
Tssr126786 14 79397754 to 79397830 76 + TSS region transcription start site region 126786
Cpgi6775 14 79397771 to 79397986 215 CpG island CpG island 6775
Mtrf1 14 79397772 to 79423587 25815 + protein coding gene mitochondrial translational release factor 1
Tssr126787 14 79397948 to 79397991 43 + TSS region transcription start site region 126787
Cpgi6776 14 79420378 to 79420607 229 CpG island CpG island 6776
Cpgi6777 14 79426303 to 79426704 401 CpG island CpG island 6777
Tssr126788 14 79426410 to 79426453 43 + TSS region transcription start site region 126788
Tssr126789 14 79426454 to 79426478 24 + TSS region transcription start site region 126789
Kbtbd7 14 79426511 to 79431036 4525 + protein coding gene kelch repeat and BTB (POZ) domain containing 7
Tssr126790 14 79426591 to 79426603 12 + TSS region transcription start site region 126790
Tssr126791 14 79426617 to 79426653 36 + TSS region transcription start site region 126791
Cpgi6778 14 79451733 to 79452038 305 CpG island CpG island 6778
Tssr126792 14 79451791 to 79451840 49 + TSS region transcription start site region 126792
Kbtbd6 14 79451835 to 79454816 2981 + protein coding gene kelch repeat and BTB (POZ) domain containing 6
Tssr126793 14 79451939 to 79451951 12 + TSS region transcription start site region 126793
Wbp4 14 79459937 to 79481268 21331 - protein coding gene WW domain binding protein 4
Tssr129903 14 79467378 to 79467399 21 - TSS region transcription start site region 129903
Tssr129904 14 79467409 to 79467426 17 - TSS region transcription start site region 129904
Tssr129905 14 79470133 to 79470174 41 - TSS region transcription start site region 129905
Cpgi6779 14 79480655 to 79482314 1659 CpG island CpG island 6779
Tssr129906 14 79480968 to 79480977 9 - TSS region transcription start site region 129906
Tssr129907 14 79480995 to 79481020 25 - TSS region transcription start site region 129907
Tssr129908 14 79481024 to 79481076 52 - TSS region transcription start site region 129908
Tssr126794 14 79481164 to 79481185 21 + TSS region transcription start site region 126794
Elf1 14 79481194 to 79582491 101297 + protein coding gene E74-like factor 1
Tssr129909 14 79481415 to 79481449 34 - TSS region transcription start site region 129909
Tssr129910 14 79481450 to 79481514 64 - TSS region transcription start site region 129910
Tssr126795 14 79481523 to 79481608 85 + TSS region transcription start site region 126795
n-TEttc4 14 79481668 to 79481739 71 + tRNA gene nuclear encoded tRNA glutamic acid 4 (anticodon TTC)
Tssr129911 14 79482381 to 79482396 15 - TSS region transcription start site region 129911
Gm9243 14 79486665 to 79529900 43235 + pseudogene predicted gene 9243
Tssr126796 14 79515618 to 79515694 76 + TSS region transcription start site region 126796
Tssr126797 14 79515695 to 79515707 12 + TSS region transcription start site region 126797
Tssr126798 14 79515714 to 79515732 18 + TSS region transcription start site region 126798
Tssr126799 14 79516422 to 79516445 23 + TSS region transcription start site region 126799
Tssr126800 14 79516568 to 79516573 5 + TSS region transcription start site region 126800
Tssr129912 14 79521856 to 79521869 13 - TSS region transcription start site region 129912
Tssr126801 14 79521957 to 79521974 17 + TSS region transcription start site region 126801
Tssr129913 14 79526177 to 79526180 3 - TSS region transcription start site region 129913
Tssr129914 14 79526222 to 79526239 17 - TSS region transcription start site region 129914
Tssr126802 14 79530673 to 79530687 14 + TSS region transcription start site region 126802
Tssr126803 14 79530692 to 79530707 15 + TSS region transcription start site region 126803
Tssr126804 14 79535535 to 79535576 41 + TSS region transcription start site region 126804
Tssr126805 14 79535577 to 79535591 14 + TSS region transcription start site region 126805
Tssr126806 14 79535596 to 79535607 11 + TSS region transcription start site region 126806
Tssr126807 14 79535640 to 79535654 14 + TSS region transcription start site region 126807
Tssr129915 14 79535675 to 79535678 3 - TSS region transcription start site region 129915
Tssr126808 14 79535762 to 79535773 11 + TSS region transcription start site region 126808
Tssr126809 14 79536226 to 79536236 10 + TSS region transcription start site region 126809
Tssr126810 14 79536336 to 79536341 5 + TSS region transcription start site region 126810
Tssr126811 14 79539881 to 79539891 10 + TSS region transcription start site region 126811
Tssr126812 14 79540193 to 79540204 11 + TSS region transcription start site region 126812
Tssr126813 14 79549396 to 79549443 47 + TSS region transcription start site region 126813
Gm27857 14 79562167 to 79562292 125 - miRNA gene predicted gene, 27857
Cpgi6780 14 79587098 to 79588005 907 CpG island CpG island 6780
Tssr126814 14 79587654 to 79587668 14 + TSS region transcription start site region 126814
Tssr126815 14 79587670 to 79587679 9 + TSS region transcription start site region 126815
Sugt1 14 79587691 to 79629755 42064 + protein coding gene SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
Tssr126816 14 79587700 to 79587712 12 + TSS region transcription start site region 126816
Tssr126817 14 79587726 to 79587797 71 + TSS region transcription start site region 126817
Tssr126818 14 79587799 to 79587820 21 + TSS region transcription start site region 126818
Tssr126819 14 79619736 to 79619770 34 + TSS region transcription start site region 126819
Cnmd 14 79637690 to 79662170 24480 - protein coding gene chondromodulin
Tssr129916 14 79642140 to 79642151 11 - TSS region transcription start site region 129916
Cpgi6781 14 79656392 to 79656592 200 CpG island CpG island 6781
Tssr4492 14 79660737 to 79660745 8 + TSS region transcription start site region 4492
Cpgi6782 14 79661230 to 79661696 466 CpG island CpG island 6782
Tssr129917 14 79662090 to 79662101 11 - TSS region transcription start site region 129917
Tssr129918 14 79662107 to 79662112 5 - TSS region transcription start site region 129918
Tssr129919 14 79662119 to 79662145 26 - TSS region transcription start site region 129919
Tssr129920 14 79662148 to 79662173 25 - TSS region transcription start site region 129920
Gm41218 14 79662933 to 79694952 32019 + lncRNA gene predicted gene, 41218
Cpgi6783 14 79677101 to 79677304 203 CpG island CpG island 6783
Gm49042 14 79695037 to 79702410 7373 - lincRNA gene predicted gene, 49042
Tssr126820 14 79702890 to 79702904 14 + TSS region transcription start site region 126820
4930452G13Rik 14 79702920 to 79712930 10010 + lincRNA gene RIKEN cDNA 4930452G13 gene
Tssr4493 14 79703738 to 79703749 11 + TSS region transcription start site region 4493
Tssr129921 14 79704028 to 79704073 45 - TSS region transcription start site region 129921
Tssr126821 14 79704071 to 79704082 11 + TSS region transcription start site region 126821
Tssr126822 14 79704088 to 79704099 11 + TSS region transcription start site region 126822
Tssr126823 14 79704302 to 79704312 10 + TSS region transcription start site region 126823
Mir759 14 79738431 to 79738528 97 + miRNA gene microRNA 759
Pcdh8 14 79766775 to 79771312 4537 - protein coding gene protocadherin 8
Cpgi6784 14 79768040 to 79771468 3428 CpG island CpG island 6784
Tssr126824 14 79769886 to 79769897 11 + TSS region transcription start site region 126824
Tssr126825 14 79769898 to 79769910 12 + TSS region transcription start site region 126825
Gm9748 14 79769908 to 79772743 2835 + antisense lncRNA gene predicted gene 9748
Tssr126826 14 79769917 to 79769922 5 + TSS region transcription start site region 126826
Tssr126827 14 79769926 to 79769935 9 + TSS region transcription start site region 126827
Tssr129922 14 79771305 to 79771318 13 - TSS region transcription start site region 129922
Cpgi6785 14 79773810 to 79774427 617 CpG island CpG island 6785
D14Mit117 14 79794579 to 79794728 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 117
Gm10845 14 79860521 to 79869176 8655 - lincRNA gene predicted gene 10845
Tssr126828 14 79875568 to 79875600 32 + TSS region transcription start site region 126828
Gm6999 14 79890972 to 79984136 93164 + lincRNA gene predicted gene 6999
Tssr126829 14 79891092 to 79891103 11 + TSS region transcription start site region 126829
Tssr126830 14 79898441 to 79898448 7 + TSS region transcription start site region 126830
Gm49542 14 79898467 to 79907230 8763 + lincRNA gene predicted gene, 49542
D14Mit162.2 14 79927427 to 79927551 124 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 162.2
D14Mit162 14 79927521 to 79927627 106 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 162
Gm18605 14 79947679 to 79948279 600 + pseudogene predicted gene, 18605
Olfm4 14 80000153 to 80022874 22721 + protein coding gene olfactomedin 4
Tssr126831 14 80000292 to 80000309 17 + TSS region transcription start site region 126831
Tssr126832 14 80006218 to 80006250 32 + TSS region transcription start site region 126832
Tssr126833 14 80006267 to 80006276 9 + TSS region transcription start site region 126833
Tssr126834 14 80021209 to 80021217 8 + TSS region transcription start site region 126834
Tssr126835 14 80021280 to 80021291 11 + TSS region transcription start site region 126835
Tssr126836 14 80021422 to 80021430 8 + TSS region transcription start site region 126836
Tssr126837 14 80022160 to 80022180 20 + TSS region transcription start site region 126837
Tssr126838 14 80022231 to 80022240 9 + TSS region transcription start site region 126838
Tssr126839 14 80022324 to 80022339 15 + TSS region transcription start site region 126839
Tssr126840 14 80022560 to 80022567 7 + TSS region transcription start site region 126840
Tssr126841 14 80022709 to 80022718 9 + TSS region transcription start site region 126841
D14Mit74 14 80028196 to 80028342 146 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 74
Gm17923 14 80214958 to 80216359 1401 + pseudogene predicted gene, 17923
Gm31776 14 80245092 to 80260936 15844 + lncRNA gene predicted gene, 31776
Gm46473 14 80270045 to 80343787 73742 + lncRNA gene predicted gene, 46473
Gm9578 14 80341733 to 80342485 752 - pseudogene predicted gene 9578
Gm31921 14 80372603 to 80376457 3854 + lncRNA gene predicted gene, 31921
Gm31980 14 80378125 to 80381915 3790 + lncRNA gene predicted gene, 31980