Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:78750173-79520177

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49009 14 78762103 to 78762719 616 + pseudogene predicted gene, 49009
Gm30584 14 78820981 to 78821197 216 + pseudogene predicted gene, 30584
Gm19098 14 78829326 to 78831270 1944 - pseudogene predicted gene, 19098
Cpgi6771 14 78848919 to 78849569 650 CpG island CpG island 6771
Vwa8 14 78849056 to 79202310 353254 + protein coding gene von Willebrand factor A domain containing 8
Tssr126776 14 78849155 to 78849166 11 + TSS region transcription start site region 126776
Tssr126777 14 78849171 to 78849220 49 + TSS region transcription start site region 126777
Tssr126778 14 78849232 to 78849243 11 + TSS region transcription start site region 126778
Gm49016 14 78945180 to 78947227 2047 - antisense lncRNA gene predicted gene, 49016
Gm6997 14 78965949 to 78966568 619 - pseudogene predicted gene 6997
Tssr129883 14 78966556 to 78966594 38 - TSS region transcription start site region 129883
Tssr126779 14 78966864 to 78966868 4 + TSS region transcription start site region 126779
Tssr126780 14 79077282 to 79077289 7 + TSS region transcription start site region 126780
Gm49011 14 79105709 to 79105879 170 + pseudogene predicted gene, 49011
Gm30970 14 79106039 to 79106401 362 - lncRNA gene predicted gene, 30970
5730406G12Rik 14 79111334 to 79113256 1922 unclassified gene RIKEN cDNA 5730406G12 gene
Tssr126781 14 79129080 to 79129084 4 + TSS region transcription start site region 126781
Tssr129884 14 79135173 to 79135177 4 - TSS region transcription start site region 129884
Gm49015 14 79146259 to 79151389 5130 - antisense lncRNA gene predicted gene, 49015
Tssr129885 14 79151782 to 79151790 8 - TSS region transcription start site region 129885
Tssr129886 14 79151793 to 79151817 24 - TSS region transcription start site region 129886
Fembm2 14 79160020 to 79160240 220 QTL femoral bone morphometry 2
D14Mit35 14 79160020 to 79160240 220 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 35
Gm18081 14 79174391 to 79175202 811 + pseudogene predicted gene, 18081
Gm4632 14 79178894 to 79199190 20296 - antisense lncRNA gene predicted gene 4632
Tssr126782 14 79180679 to 79180685 6 + TSS region transcription start site region 126782
Tssr129887 14 79199143 to 79199160 17 - TSS region transcription start site region 129887
Tssr129888 14 79199172 to 79199191 19 - TSS region transcription start site region 129888
Tssr129889 14 79199200 to 79199227 27 - TSS region transcription start site region 129889
Zfp957 14 79212355 to 79247367 35012 - protein coding gene zinc finger protein 957
Tssr129890 14 79243615 to 79243625 10 - TSS region transcription start site region 129890
Gm49028 14 79260453 to 79261382 929 + pseudogene predicted gene, 49028
Cpgi6772 14 79267840 to 79267995 155 CpG island CpG island 6772
Rgcc 14 79288750 to 79301635 12885 - protein coding gene regulator of cell cycle
Tssr126783 14 79290212 to 79290251 39 + TSS region transcription start site region 126783
Tssr129891 14 79291990 to 79291998 8 - TSS region transcription start site region 129891
A130038J17Rik 14 79296750 to 79300360 3610 unclassified gene RIKEN cDNA A130038J17 gene
Tssr129892 14 79300315 to 79300318 3 - TSS region transcription start site region 129892
Cpgi6773 14 79300366 to 79301938 1572 CpG island CpG island 6773
Tssr129893 14 79300926 to 79300931 5 - TSS region transcription start site region 129893
Tssr129894 14 79300991 to 79300999 8 - TSS region transcription start site region 129894
Tssr129895 14 79301014 to 79301026 12 - TSS region transcription start site region 129895
Tssr129896 14 79301040 to 79301043 3 - TSS region transcription start site region 129896
Tssr129897 14 79301052 to 79301062 10 - TSS region transcription start site region 129897
Tssr129898 14 79301074 to 79301092 18 - TSS region transcription start site region 129898
1700010B09Rik 14 79301148 to 79302039 891 unclassified gene RIKEN cDNA 1700010B09 gene
Tssr126784 14 79301154 to 79301166 12 + TSS region transcription start site region 126784
Tssr4491 14 79301185 to 79301193 8 + TSS region transcription start site region 4491
Tssr126785 14 79301198 to 79301205 7 + TSS region transcription start site region 126785
Tssr129899 14 79301623 to 79301641 18 - TSS region transcription start site region 129899
Gm46472 14 79303438 to 79310107 6669 - lncRNA gene predicted gene, 46472
Naa16 14 79334507 to 79390777 56270 - protein coding gene N(alpha)-acetyltransferase 16, NatA auxiliary subunit
Tssr129900 14 79389417 to 79389421 4 - TSS region transcription start site region 129900
Cpgi6774 14 79390093 to 79390960 867 CpG island CpG island 6774
Tssr129901 14 79390639 to 79390653 14 - TSS region transcription start site region 129901
Tssr129902 14 79390666 to 79390743 77 - TSS region transcription start site region 129902
Tssr126786 14 79397754 to 79397830 76 + TSS region transcription start site region 126786
Cpgi6775 14 79397771 to 79397986 215 CpG island CpG island 6775
Mtrf1 14 79397772 to 79423587 25815 + protein coding gene mitochondrial translational release factor 1
Tssr126787 14 79397948 to 79397991 43 + TSS region transcription start site region 126787
Cpgi6776 14 79420378 to 79420607 229 CpG island CpG island 6776
Cpgi6777 14 79426303 to 79426704 401 CpG island CpG island 6777
Tssr126788 14 79426410 to 79426453 43 + TSS region transcription start site region 126788
Tssr126789 14 79426454 to 79426478 24 + TSS region transcription start site region 126789
Kbtbd7 14 79426511 to 79431036 4525 + protein coding gene kelch repeat and BTB (POZ) domain containing 7
Tssr126790 14 79426591 to 79426603 12 + TSS region transcription start site region 126790
Tssr126791 14 79426617 to 79426653 36 + TSS region transcription start site region 126791
Cpgi6778 14 79451733 to 79452038 305 CpG island CpG island 6778
Tssr126792 14 79451791 to 79451840 49 + TSS region transcription start site region 126792
Kbtbd6 14 79451835 to 79454816 2981 + protein coding gene kelch repeat and BTB (POZ) domain containing 6
Tssr126793 14 79451939 to 79451951 12 + TSS region transcription start site region 126793
Wbp4 14 79459937 to 79481268 21331 - protein coding gene WW domain binding protein 4
Tssr129903 14 79467378 to 79467399 21 - TSS region transcription start site region 129903
Tssr129904 14 79467409 to 79467426 17 - TSS region transcription start site region 129904
Tssr129905 14 79470133 to 79470174 41 - TSS region transcription start site region 129905
Cpgi6779 14 79480655 to 79482314 1659 CpG island CpG island 6779
Tssr129906 14 79480968 to 79480977 9 - TSS region transcription start site region 129906
Tssr129907 14 79480995 to 79481020 25 - TSS region transcription start site region 129907
Tssr129908 14 79481024 to 79481076 52 - TSS region transcription start site region 129908
Tssr126794 14 79481164 to 79481185 21 + TSS region transcription start site region 126794
Elf1 14 79481194 to 79582491 101297 + protein coding gene E74-like factor 1
Tssr129909 14 79481415 to 79481449 34 - TSS region transcription start site region 129909
Tssr129910 14 79481450 to 79481514 64 - TSS region transcription start site region 129910
Tssr126795 14 79481523 to 79481608 85 + TSS region transcription start site region 126795
n-TEttc4 14 79481668 to 79481739 71 + tRNA gene nuclear encoded tRNA glutamic acid 4 (anticodon TTC)
Tssr129911 14 79482381 to 79482396 15 - TSS region transcription start site region 129911
Gm9243 14 79486665 to 79529900 43235 + pseudogene predicted gene 9243
Tssr126796 14 79515618 to 79515694 76 + TSS region transcription start site region 126796
Tssr126797 14 79515695 to 79515707 12 + TSS region transcription start site region 126797
Tssr126798 14 79515714 to 79515732 18 + TSS region transcription start site region 126798
Tssr126799 14 79516422 to 79516445 23 + TSS region transcription start site region 126799
Tssr126800 14 79516568 to 79516573 5 + TSS region transcription start site region 126800