Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:78002252-78613246

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epsti1 14 77904239 to 78002656 98417 + protein coding gene epithelial stromal interaction 1 (breast)
Gm48954 14 78019728 to 78048336 28608 + lincRNA gene predicted gene, 48954
Cpgi6765 14 78037838 to 78038344 506 CpG island CpG island 6765
Gm19301 14 78070717 to 78090786 20069 + lincRNA gene predicted gene, 19301
Gm48955 14 78072772 to 78072990 218 - pseudogene predicted gene, 48955
Fam216b 14 78081024 to 78089007 7983 - protein coding gene family with sequence similarity 216, member B
Tssr129853 14 78088977 to 78088993 16 - TSS region transcription start site region 129853
Tssr129854 14 78088994 to 78089031 37 - TSS region transcription start site region 129854
Gm30608 14 78144745 to 78146612 1867 + lncRNA gene predicted gene, 30608
Mir1971 14 78191373 to 78191478 105 - miRNA gene microRNA 1971
Gm48959 14 78199373 to 78199769 396 + pseudogene predicted gene, 48959
Tssr129855 14 78220490 to 78220537 47 - TSS region transcription start site region 129855
Gm23652 14 78246205 to 78246311 106 - miRNA gene predicted gene, 23652
Tnfsf11 14 78277446 to 78308043 30597 - protein coding gene tumor necrosis factor (ligand) superfamily, member 11
Cpgi6766 14 78307252 to 78308246 994 CpG island CpG island 6766
Tssr129856 14 78308031 to 78308050 19 - TSS region transcription start site region 129856
Gm26197 14 78311226 to 78311340 114 - rRNA gene predicted gene, 26197
Gm30662 14 78330572 to 78332103 1531 - lncRNA gene predicted gene, 30662
Tssr129857 14 78332045 to 78332057 12 - TSS region transcription start site region 129857
Tssr129858 14 78332059 to 78332066 7 - TSS region transcription start site region 129858
Tssr129859 14 78332081 to 78332106 25 - TSS region transcription start site region 129859
Tssr126766 14 78384773 to 78384776 3 + TSS region transcription start site region 126766
Gm18277 14 78418717 to 78419253 536 + pseudogene predicted gene, 18277
Tssr126767 14 78434997 to 78435010 13 + TSS region transcription start site region 126767
Cpgi6767 14 78461014 to 78461190 176 CpG island CpG island 6767
Tssr126768 14 78461079 to 78461105 26 + TSS region transcription start site region 126768
Gm4821 14 78461292 to 78461818 526 + pseudogene predicted gene 4821
Akap11 14 78492246 to 78536808 44562 - protein coding gene A kinase (PRKA) anchor protein 11
Cpgi6768 14 78536255 to 78537466 1211 CpG island CpG island 6768
Tssr129860 14 78536762 to 78536851 89 - TSS region transcription start site region 129860
Tssr129861 14 78536854 to 78536879 25 - TSS region transcription start site region 129861
Dgkh 14 78558750 to 78732776 174026 - protein coding gene diacylglycerol kinase, eta
Tssr129862 14 78561914 to 78561938 24 - TSS region transcription start site region 129862
Tssr129863 14 78565583 to 78565596 13 - TSS region transcription start site region 129863
Tssr129864 14 78565617 to 78565635 18 - TSS region transcription start site region 129864
Tssr129865 14 78583942 to 78583983 41 - TSS region transcription start site region 129865
Tssr129866 14 78592026 to 78592031 5 - TSS region transcription start site region 129866
Gm48998 14 78597770 to 78600476 2706 - unclassified gene predicted gene, 48998
Gm26251 14 78603710 to 78603831 121 + snoRNA gene predicted gene, 26251
Tssr129867 14 78610168 to 78610182 14 - TSS region transcription start site region 129867