Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:77966255-79107466

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82 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epsti1 14 77904239 to 78002656 98417 + protein coding gene epithelial stromal interaction 1 (breast)
Gm48954 14 78019728 to 78048336 28608 + lincRNA gene predicted gene, 48954
Cpgi6765 14 78037838 to 78038344 506 CpG island CpG island 6765
Gm19301 14 78070717 to 78090786 20069 + lincRNA gene predicted gene, 19301
Gm48955 14 78072772 to 78072990 218 - pseudogene predicted gene, 48955
Fam216b 14 78081024 to 78089007 7983 - protein coding gene family with sequence similarity 216, member B
Tssr129853 14 78088977 to 78088993 16 - TSS region transcription start site region 129853
Tssr129854 14 78088994 to 78089031 37 - TSS region transcription start site region 129854
Gm30608 14 78144745 to 78146612 1867 + lncRNA gene predicted gene, 30608
Mir1971 14 78191373 to 78191478 105 - miRNA gene microRNA 1971
Gm48959 14 78199373 to 78199769 396 + pseudogene predicted gene, 48959
Tssr129855 14 78220490 to 78220537 47 - TSS region transcription start site region 129855
Gm23652 14 78246205 to 78246311 106 - miRNA gene predicted gene, 23652
Tnfsf11 14 78277446 to 78308043 30597 - protein coding gene tumor necrosis factor (ligand) superfamily, member 11
Cpgi6766 14 78307252 to 78308246 994 CpG island CpG island 6766
Tssr129856 14 78308031 to 78308050 19 - TSS region transcription start site region 129856
Gm26197 14 78311226 to 78311340 114 - rRNA gene predicted gene, 26197
Gm30662 14 78330572 to 78332103 1531 - lncRNA gene predicted gene, 30662
Tssr129857 14 78332045 to 78332057 12 - TSS region transcription start site region 129857
Tssr129858 14 78332059 to 78332066 7 - TSS region transcription start site region 129858
Tssr129859 14 78332081 to 78332106 25 - TSS region transcription start site region 129859
Tssr126766 14 78384773 to 78384776 3 + TSS region transcription start site region 126766
Gm18277 14 78418717 to 78419253 536 + pseudogene predicted gene, 18277
Tssr126767 14 78434997 to 78435010 13 + TSS region transcription start site region 126767
Cpgi6767 14 78461014 to 78461190 176 CpG island CpG island 6767
Tssr126768 14 78461079 to 78461105 26 + TSS region transcription start site region 126768
Gm4821 14 78461292 to 78461818 526 + pseudogene predicted gene 4821
Akap11 14 78492246 to 78536808 44562 - protein coding gene A kinase (PRKA) anchor protein 11
Cpgi6768 14 78536255 to 78537466 1211 CpG island CpG island 6768
Tssr129860 14 78536762 to 78536851 89 - TSS region transcription start site region 129860
Tssr129861 14 78536854 to 78536879 25 - TSS region transcription start site region 129861
Dgkh 14 78558750 to 78732776 174026 - protein coding gene diacylglycerol kinase, eta
Tssr129862 14 78561914 to 78561938 24 - TSS region transcription start site region 129862
Tssr129863 14 78565583 to 78565596 13 - TSS region transcription start site region 129863
Tssr129864 14 78565617 to 78565635 18 - TSS region transcription start site region 129864
Tssr129865 14 78583942 to 78583983 41 - TSS region transcription start site region 129865
Tssr129866 14 78592026 to 78592031 5 - TSS region transcription start site region 129866
Gm48998 14 78597770 to 78600476 2706 - unclassified gene predicted gene, 48998
Gm26251 14 78603710 to 78603831 121 + snoRNA gene predicted gene, 26251
Tssr129867 14 78610168 to 78610182 14 - TSS region transcription start site region 129867
Tssr129868 14 78616350 to 78616354 4 - TSS region transcription start site region 129868
Tssr129869 14 78620957 to 78620959 2 - TSS region transcription start site region 129869
Tssr129870 14 78629286 to 78629292 6 - TSS region transcription start site region 129870
Tssr129871 14 78632745 to 78632767 22 - TSS region transcription start site region 129871
Tssr129872 14 78644407 to 78644418 11 - TSS region transcription start site region 129872
Tssr129873 14 78644423 to 78644436 13 - TSS region transcription start site region 129873
Tssr129874 14 78644443 to 78644456 13 - TSS region transcription start site region 129874
Tssr129875 14 78650537 to 78650548 11 - TSS region transcription start site region 129875
Tssr126769 14 78650892 to 78650905 13 + TSS region transcription start site region 126769
Gm30716 14 78650924 to 78653166 2242 + lncRNA gene predicted gene, 30716
Tssr126770 14 78650929 to 78650938 9 + TSS region transcription start site region 126770
Tssr129876 14 78656349 to 78656354 5 - TSS region transcription start site region 129876
Tssr129877 14 78692212 to 78692230 18 - TSS region transcription start site region 129877
Tssr126771 14 78692346 to 78692395 49 + TSS region transcription start site region 126771
Tssr126772 14 78699475 to 78699480 5 + TSS region transcription start site region 126772
Tssr126773 14 78703539 to 78703585 46 + TSS region transcription start site region 126773
Gm18368 14 78703833 to 78704563 730 + pseudogene predicted gene, 18368
Tssr129878 14 78713656 to 78713657 1 - TSS region transcription start site region 129878
Tssr129879 14 78717190 to 78717206 16 - TSS region transcription start site region 129879
2610027H17Rik 14 78723860 to 78724327 467 unclassified gene RIKEN cDNA 2610027H17 gene
Cpgi6769 14 78724687 to 78725532 845 CpG island CpG island 6769
Tssr126774 14 78724849 to 78724880 31 + TSS region transcription start site region 126774
Cpgi6770 14 78731763 to 78733358 1595 CpG island CpG island 6770
Tssr129880 14 78732628 to 78732647 19 - TSS region transcription start site region 129880
Tssr129881 14 78732700 to 78732775 75 - TSS region transcription start site region 129881
Tssr129882 14 78732785 to 78732796 11 - TSS region transcription start site region 129882
Tssr126775 14 78732919 to 78732932 13 + TSS region transcription start site region 126775
Gm49009 14 78762103 to 78762719 616 + pseudogene predicted gene, 49009
Gm30584 14 78820981 to 78821197 216 + pseudogene predicted gene, 30584
Gm19098 14 78829326 to 78831270 1944 - pseudogene predicted gene, 19098
Cpgi6771 14 78848919 to 78849569 650 CpG island CpG island 6771
Vwa8 14 78849056 to 79202310 353254 + protein coding gene von Willebrand factor A domain containing 8
Tssr126776 14 78849155 to 78849166 11 + TSS region transcription start site region 126776
Tssr126777 14 78849171 to 78849220 49 + TSS region transcription start site region 126777
Tssr126778 14 78849232 to 78849243 11 + TSS region transcription start site region 126778
Gm49016 14 78945180 to 78947227 2047 - antisense lncRNA gene predicted gene, 49016
Gm6997 14 78965949 to 78966568 619 - pseudogene predicted gene 6997
Tssr129883 14 78966556 to 78966594 38 - TSS region transcription start site region 129883
Tssr126779 14 78966864 to 78966868 4 + TSS region transcription start site region 126779
Tssr126780 14 79077282 to 79077289 7 + TSS region transcription start site region 126780
Gm49011 14 79105709 to 79105879 170 + pseudogene predicted gene, 49011
Gm30970 14 79106039 to 79106401 362 - lncRNA gene predicted gene, 30970