Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:77136288-78586296

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91 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi6760 14 77156161 to 77157967 1806 CpG island CpG island 6760
Tssr126748 14 77156733 to 77156823 90 + TSS region transcription start site region 126748
Enox1 14 77156763 to 77721760 564997 + protein coding gene ecto-NOX disulfide-thiol exchanger 1
Tssr126749 14 77156830 to 77156843 13 + TSS region transcription start site region 126749
Tssr4488 14 77156866 to 77156875 9 + TSS region transcription start site region 4488
Cpgi6761 14 77174559 to 77174763 204 CpG island CpG island 6761
Tssr4489 14 77176919 to 77176920 1 + TSS region transcription start site region 4489
Gm10132 14 77251847 to 77252314 467 - pseudogene predicted gene 10132
Tssr129840 14 77252327 to 77252328 1 - TSS region transcription start site region 129840
Gm49001 14 77342602 to 77344854 2252 - pseudogene predicted gene, 49001
Gm41217 14 77367661 to 77371318 3657 - lncRNA gene predicted gene, 41217
D14Mit70 14 77379052 to 77379177 125 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 70
Gm49002 14 77438586 to 77440976 2390 - antisense lncRNA gene predicted gene, 49002
Tssr126750 14 77473870 to 77473875 5 + TSS region transcription start site region 126750
Gm6994 14 77479483 to 77506868 27385 - antisense lncRNA gene predicted gene 6994
Tssr126751 14 77519948 to 77519959 11 + TSS region transcription start site region 126751
Tssr126752 14 77520130 to 77520139 9 + TSS region transcription start site region 126752
Tssr126753 14 77520140 to 77520169 29 + TSS region transcription start site region 126753
Tssr126754 14 77520172 to 77520204 32 + TSS region transcription start site region 126754
Tssr126755 14 77520217 to 77520232 15 + TSS region transcription start site region 126755
n-R5s48 14 77530398 to 77530507 109 + rRNA gene nuclear encoded rRNA 5S 48
Cpgi6762 14 77539573 to 77539862 289 CpG island CpG island 6762
Tssr4490 14 77539747 to 77539791 44 + TSS region transcription start site region 4490
Gm23823 14 77540642 to 77540765 123 - snoRNA gene predicted gene, 23823
Gm49003 14 77578544 to 77633860 55316 - antisense lncRNA gene predicted gene, 49003
Cpgi6763 14 77582412 to 77582625 213 CpG island CpG island 6763
Tssr126756 14 77663271 to 77663276 5 + TSS region transcription start site region 126756
Gm30467 14 77781072 to 77790663 9591 + lincRNA gene predicted gene, 30467
Gm1587 14 77793945 to 77798968 5023 - protein coding gene predicted gene 1587
6330531I01Rik 14 77820689 to 77822321 1632 unclassified gene RIKEN cDNA 6330531I01 gene
2900011G08Rik 14 77823737 to 77824963 1226 unclassified gene RIKEN cDNA 2900011G08 gene
Dnajc15 14 77826217 to 77874917 48700 - protein coding gene DnaJ heat shock protein family (Hsp40) member C15
Tssr129841 14 77844355 to 77844360 5 - TSS region transcription start site region 129841
Tssr129842 14 77856294 to 77856298 4 - TSS region transcription start site region 129842
Tssr129843 14 77856966 to 77856991 25 - TSS region transcription start site region 129843
Tssr129844 14 77861288 to 77861296 8 - TSS region transcription start site region 129844
Tssr129845 14 77861316 to 77861343 27 - TSS region transcription start site region 129845
Cpgi6764 14 77874674 to 77875067 393 CpG island CpG island 6764
Tssr129846 14 77874845 to 77874856 11 - TSS region transcription start site region 129846
Tssr129847 14 77874866 to 77874877 11 - TSS region transcription start site region 129847
Tssr129848 14 77874887 to 77874941 54 - TSS region transcription start site region 129848
Tssr129849 14 77875053 to 77875067 14 - TSS region transcription start site region 129849
Tssr129850 14 77875093 to 77875108 15 - TSS region transcription start site region 129850
Tssr129851 14 77875127 to 77875134 7 - TSS region transcription start site region 129851
Epsti1 14 77904239 to 78002656 98417 + protein coding gene epithelial stromal interaction 1 (breast)
Tssr126757 14 77904349 to 77904360 11 + TSS region transcription start site region 126757
Tssr126758 14 77904365 to 77904441 76 + TSS region transcription start site region 126758
Tssr129852 14 77904394 to 77904403 9 - TSS region transcription start site region 129852
Tssr126759 14 77904448 to 77904453 5 + TSS region transcription start site region 126759
Tssr126760 14 77904474 to 77904503 29 + TSS region transcription start site region 126760
Tssr126761 14 77904519 to 77904533 14 + TSS region transcription start site region 126761
Tssr126762 14 77904892 to 77904902 10 + TSS region transcription start site region 126762
Tssr126763 14 77915160 to 77915165 5 + TSS region transcription start site region 126763
D14Mit242 14 77923492 to 77923613 121 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 242
Tssr126764 14 77931240 to 77931282 42 + TSS region transcription start site region 126764
Tssr126765 14 77940381 to 77940383 2 + TSS region transcription start site region 126765
Gm48954 14 78019728 to 78048336 28608 + lincRNA gene predicted gene, 48954
Cpgi6765 14 78037838 to 78038344 506 CpG island CpG island 6765
Gm19301 14 78070717 to 78090786 20069 + lincRNA gene predicted gene, 19301
Gm48955 14 78072772 to 78072990 218 - pseudogene predicted gene, 48955
Fam216b 14 78081024 to 78089007 7983 - protein coding gene family with sequence similarity 216, member B
Tssr129853 14 78088977 to 78088993 16 - TSS region transcription start site region 129853
Tssr129854 14 78088994 to 78089031 37 - TSS region transcription start site region 129854
Gm30608 14 78144745 to 78146612 1867 + lncRNA gene predicted gene, 30608
Mir1971 14 78191373 to 78191478 105 - miRNA gene microRNA 1971
Gm48959 14 78199373 to 78199769 396 + pseudogene predicted gene, 48959
Tssr129855 14 78220490 to 78220537 47 - TSS region transcription start site region 129855
Gm23652 14 78246205 to 78246311 106 - miRNA gene predicted gene, 23652
Tnfsf11 14 78277446 to 78308043 30597 - protein coding gene tumor necrosis factor (ligand) superfamily, member 11
Cpgi6766 14 78307252 to 78308246 994 CpG island CpG island 6766
Tssr129856 14 78308031 to 78308050 19 - TSS region transcription start site region 129856
Gm26197 14 78311226 to 78311340 114 - rRNA gene predicted gene, 26197
Gm30662 14 78330572 to 78332103 1531 - lncRNA gene predicted gene, 30662
Tssr129857 14 78332045 to 78332057 12 - TSS region transcription start site region 129857
Tssr129858 14 78332059 to 78332066 7 - TSS region transcription start site region 129858
Tssr129859 14 78332081 to 78332106 25 - TSS region transcription start site region 129859
Tssr126766 14 78384773 to 78384776 3 + TSS region transcription start site region 126766
Gm18277 14 78418717 to 78419253 536 + pseudogene predicted gene, 18277
Tssr126767 14 78434997 to 78435010 13 + TSS region transcription start site region 126767
Cpgi6767 14 78461014 to 78461190 176 CpG island CpG island 6767
Tssr126768 14 78461079 to 78461105 26 + TSS region transcription start site region 126768
Gm4821 14 78461292 to 78461818 526 + pseudogene predicted gene 4821
Akap11 14 78492246 to 78536808 44562 - protein coding gene A kinase (PRKA) anchor protein 11
Cpgi6768 14 78536255 to 78537466 1211 CpG island CpG island 6768
Tssr129860 14 78536762 to 78536851 89 - TSS region transcription start site region 129860
Tssr129861 14 78536854 to 78536879 25 - TSS region transcription start site region 129861
Dgkh 14 78558750 to 78732776 174026 - protein coding gene diacylglycerol kinase, eta
Tssr129862 14 78561914 to 78561938 24 - TSS region transcription start site region 129862
Tssr129863 14 78565583 to 78565596 13 - TSS region transcription start site region 129863
Tssr129864 14 78565617 to 78565635 18 - TSS region transcription start site region 129864
Tssr129865 14 78583942 to 78583983 41 - TSS region transcription start site region 129865