Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:76121256-76751305

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nufip1 14 76110891 to 76137379 26488 + protein coding gene nuclear fragile X mental retardation protein interacting protein 1
Cpgi6749 14 76152073 to 76152852 779 CpG island CpG island 6749
Tssr129807 14 76152645 to 76152666 21 - TSS region transcription start site region 129807
n-TEttc6 14 76152774 to 76152845 71 + tRNA gene nuclear encoded tRNA glutamic acid 6 (anticodon TTC)
Gm36534 14 76164570 to 76202581 38011 + lncRNA gene predicted gene, 36534
Cpgi6750 14 76165009 to 76165167 158 CpG island CpG island 6750
Gm41214 14 76201997 to 76205198 3201 - lncRNA gene predicted gene, 41214
Gm36583 14 76225446 to 76245183 19737 - lncRNA gene predicted gene, 36583
Rps2-ps6 14 76236691 to 76237545 854 - pseudogene ribosomal protein S2, pseudogene 6
Tssr129808 14 76237570 to 76237575 5 - TSS region transcription start site region 129808
2900040C04Rik 14 76251457 to 76252327 870 + lincRNA gene RIKEN cDNA 2900040C04 gene
Tssr126704 14 76251475 to 76251486 11 + TSS region transcription start site region 126704
Tssr126705 14 76251491 to 76251494 3 + TSS region transcription start site region 126705
Tssr126706 14 76251562 to 76251569 7 + TSS region transcription start site region 126706
Cpgi6751 14 76255059 to 76255355 296 CpG island CpG island 6751
Cpgi6752 14 76279509 to 76279732 223 CpG island CpG island 6752
Tssr126707 14 76312255 to 76312264 9 + TSS region transcription start site region 126707
D14Mit240 14 76329096 to 76329192 96 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 240
Gm41215 14 76367085 to 76369988 2903 - lncRNA gene predicted gene, 41215
Cpgi6753 14 76368085 to 76368306 221 CpG island CpG island 6753
Cpgi6754 14 76413833 to 76416841 3008 CpG island CpG island 6754
Tssr126708 14 76414732 to 76414793 61 + TSS region transcription start site region 126708
Tssr126709 14 76414794 to 76414823 29 + TSS region transcription start site region 126709
Tssr126710 14 76414929 to 76414974 45 + TSS region transcription start site region 126710
Tsc22d1 14 76414961 to 76507765 92804 + protein coding gene TSC22 domain family, member 1
Tssr126711 14 76414977 to 76414996 19 + TSS region transcription start site region 126711
Tssr126712 14 76415076 to 76415091 15 + TSS region transcription start site region 126712
Tssr126713 14 76415349 to 76415374 25 + TSS region transcription start site region 126713
Tssr126714 14 76427313 to 76427321 8 + TSS region transcription start site region 126714
D430022A14Rik 14 76430959 to 76435158 4199 unclassified gene RIKEN cDNA D430022A14 gene
Tssr126715 14 76433178 to 76433182 4 + TSS region transcription start site region 126715
Tssr126716 14 76436256 to 76436305 49 + TSS region transcription start site region 126716
Tssr126717 14 76438412 to 76438417 5 + TSS region transcription start site region 126717
Tssr126718 14 76442709 to 76442714 5 + TSS region transcription start site region 126718
Cpgi6755 14 76471372 to 76471701 329 CpG island CpG island 6755
Tssr126719 14 76476888 to 76476905 17 + TSS region transcription start site region 126719
Tssr126720 14 76476913 to 76476930 17 + TSS region transcription start site region 126720
Tssr126721 14 76477105 to 76477140 35 + TSS region transcription start site region 126721
Tssr126722 14 76479296 to 76479307 11 + TSS region transcription start site region 126722
Tssr126723 14 76487719 to 76487748 29 + TSS region transcription start site region 126723
Tssr126724 14 76487759 to 76487772 13 + TSS region transcription start site region 126724
Tssr126725 14 76488537 to 76488541 4 + TSS region transcription start site region 126725
Cpgi6756 14 76504096 to 76504676 580 CpG island CpG island 6756
Tssr126726 14 76504185 to 76504249 64 + TSS region transcription start site region 126726
Tssr126727 14 76504506 to 76504521 15 + TSS region transcription start site region 126727
Tssr126728 14 76504549 to 76504560 11 + TSS region transcription start site region 126728
Cpgi6757 14 76505776 to 76506030 254 CpG island CpG island 6757
Tssr129809 14 76506475 to 76506508 33 - TSS region transcription start site region 129809
Tssr129810 14 76506621 to 76506632 11 - TSS region transcription start site region 129810
Tssr126729 14 76507145 to 76507164 19 + TSS region transcription start site region 126729
Tssr126730 14 76507421 to 76507443 22 + TSS region transcription start site region 126730
4930444M15Rik 14 76514558 to 76520855 6297 - lincRNA gene RIKEN cDNA 4930444M15 gene
Tssr129811 14 76515485 to 76515506 21 - TSS region transcription start site region 129811
Tssr129812 14 76515520 to 76515535 15 - TSS region transcription start site region 129812
Tssr126731 14 76515942 to 76515953 11 + TSS region transcription start site region 126731
Tssr126732 14 76515976 to 76515997 21 + TSS region transcription start site region 126732
Tssr129813 14 76520809 to 76520820 11 - TSS region transcription start site region 129813
Tssr129814 14 76520850 to 76520862 12 - TSS region transcription start site region 129814
E130202H07Rik 14 76526592 to 76530746 4154 + lincRNA gene RIKEN cDNA E130202H07 gene
Serp2 14 76532814 to 76556889 24075 - protein coding gene stress-associated endoplasmic reticulum protein family member 2
Gm36845 14 76533240 to 76534206 966 + lncRNA gene predicted gene, 36845
Cpgi6758 14 76556125 to 76557447 1322 CpG island CpG island 6758
Tssr129815 14 76556642 to 76556653 11 - TSS region transcription start site region 129815
Tssr129816 14 76556662 to 76556716 54 - TSS region transcription start site region 129816
Tssr4484 14 76556854 to 76556865 11 - TSS region transcription start site region 4484
Tssr129817 14 76556883 to 76556890 7 - TSS region transcription start site region 129817
Tssr129818 14 76556907 to 76556918 11 - TSS region transcription start site region 129818
Tssr129819 14 76575970 to 76576006 36 - TSS region transcription start site region 129819
D14Mit91 14 76590424 to 76590572 148 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 91
Tssr126733 14 76599750 to 76599760 10 + TSS region transcription start site region 126733
Tssr4485 14 76610565 to 76610573 8 - TSS region transcription start site region 4485
D14Mit69 14 76624124 to 76624266 142 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 69
Fkbp1a-ps1 14 76636537 to 76636864 327 - pseudogene FK506 binding protein 1a, pseudogene 1
1700105F02Rik 14 76642032 to 76677362 35330 - lncRNA gene RIKEN cDNA 1700105F02 gene
Tssr126734 14 76645657 to 76645668 11 + TSS region transcription start site region 126734
Tssr4486 14 76671660 to 76671665 5 + TSS region transcription start site region 4486
Tssr129820 14 76673844 to 76673865 21 - TSS region transcription start site region 129820
Tssr126735 14 76674294 to 76674308 14 + TSS region transcription start site region 126735
Tssr126736 14 76674348 to 76674362 14 + TSS region transcription start site region 126736
1700108F19Rik 14 76677568 to 76687108 9540 + lncRNA gene RIKEN cDNA 1700108F19 gene
Tssr126737 14 76677573 to 76677594 21 + TSS region transcription start site region 126737
Tssr126738 14 76687286 to 76687301 15 + TSS region transcription start site region 126738
Tssr126739 14 76690624 to 76690629 5 + TSS region transcription start site region 126739
Tssr129821 14 76693788 to 76693798 10 - TSS region transcription start site region 129821
Tssr4487 14 76693979 to 76693991 12 - TSS region transcription start site region 4487
Tssr126740 14 76694194 to 76694210 16 + TSS region transcription start site region 126740
Tssr126741 14 76694227 to 76694241 14 + TSS region transcription start site region 126741
Tssr129822 14 76695025 to 76695033 8 - TSS region transcription start site region 129822
Tssr126742 14 76722086 to 76722104 18 + TSS region transcription start site region 126742
Tssr126743 14 76735376 to 76735381 5 + TSS region transcription start site region 126743