Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:76056789-78006809

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189 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbconq1 14 64700000 to 77100000 12400000 QTL trabecular bone connectivity QTL 1
Tssr126700 14 76081692 to 76081696 4 + TSS region transcription start site region 126700
Tssr126701 14 76084381 to 76084420 39 + TSS region transcription start site region 126701
Gpalpp1 14 76086236 to 76110760 24524 - protein coding gene GPALPP motifs containing 1
Tssr129801 14 76098536 to 76098546 10 - TSS region transcription start site region 129801
Tssr129802 14 76104761 to 76104765 4 - TSS region transcription start site region 129802
Tssr129803 14 76109034 to 76109064 30 - TSS region transcription start site region 129803
Cpgi6748 14 76110320 to 76111467 1147 CpG island CpG island 6748
Tssr129804 14 76110720 to 76110731 11 - TSS region transcription start site region 129804
Tssr129805 14 76110760 to 76110818 58 - TSS region transcription start site region 129805
Tssr129806 14 76110820 to 76110831 11 - TSS region transcription start site region 129806
Tssr126702 14 76110885 to 76110928 43 + TSS region transcription start site region 126702
Nufip1 14 76110891 to 76137379 26488 + protein coding gene nuclear fragile X mental retardation protein interacting protein 1
Tssr126703 14 76114813 to 76114860 47 + TSS region transcription start site region 126703
Cpgi6749 14 76152073 to 76152852 779 CpG island CpG island 6749
Tssr129807 14 76152645 to 76152666 21 - TSS region transcription start site region 129807
n-TEttc6 14 76152774 to 76152845 71 + tRNA gene nuclear encoded tRNA glutamic acid 6 (anticodon TTC)
Gm36534 14 76164570 to 76202581 38011 + lncRNA gene predicted gene, 36534
Cpgi6750 14 76165009 to 76165167 158 CpG island CpG island 6750
Gm41214 14 76201997 to 76205198 3201 - lncRNA gene predicted gene, 41214
Gm36583 14 76225446 to 76245183 19737 - lncRNA gene predicted gene, 36583
Rps2-ps6 14 76236691 to 76237545 854 - pseudogene ribosomal protein S2, pseudogene 6
Tssr129808 14 76237570 to 76237575 5 - TSS region transcription start site region 129808
2900040C04Rik 14 76251457 to 76252327 870 + lincRNA gene RIKEN cDNA 2900040C04 gene
Tssr126704 14 76251475 to 76251486 11 + TSS region transcription start site region 126704
Tssr126705 14 76251491 to 76251494 3 + TSS region transcription start site region 126705
Tssr126706 14 76251562 to 76251569 7 + TSS region transcription start site region 126706
Cpgi6751 14 76255059 to 76255355 296 CpG island CpG island 6751
Cpgi6752 14 76279509 to 76279732 223 CpG island CpG island 6752
Tssr126707 14 76312255 to 76312264 9 + TSS region transcription start site region 126707
D14Mit240 14 76329096 to 76329192 96 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 240
Gm41215 14 76367085 to 76369988 2903 - lncRNA gene predicted gene, 41215
Cpgi6753 14 76368085 to 76368306 221 CpG island CpG island 6753
Cpgi6754 14 76413833 to 76416841 3008 CpG island CpG island 6754
Tssr126708 14 76414732 to 76414793 61 + TSS region transcription start site region 126708
Tssr126709 14 76414794 to 76414823 29 + TSS region transcription start site region 126709
Tssr126710 14 76414929 to 76414974 45 + TSS region transcription start site region 126710
Tsc22d1 14 76414961 to 76507765 92804 + protein coding gene TSC22 domain family, member 1
Tssr126711 14 76414977 to 76414996 19 + TSS region transcription start site region 126711
Tssr126712 14 76415076 to 76415091 15 + TSS region transcription start site region 126712
Tssr126713 14 76415349 to 76415374 25 + TSS region transcription start site region 126713
Tssr126714 14 76427313 to 76427321 8 + TSS region transcription start site region 126714
D430022A14Rik 14 76430959 to 76435158 4199 unclassified gene RIKEN cDNA D430022A14 gene
Tssr126715 14 76433178 to 76433182 4 + TSS region transcription start site region 126715
Tssr126716 14 76436256 to 76436305 49 + TSS region transcription start site region 126716
Tssr126717 14 76438412 to 76438417 5 + TSS region transcription start site region 126717
Tssr126718 14 76442709 to 76442714 5 + TSS region transcription start site region 126718
Cpgi6755 14 76471372 to 76471701 329 CpG island CpG island 6755
Tssr126719 14 76476888 to 76476905 17 + TSS region transcription start site region 126719
Tssr126720 14 76476913 to 76476930 17 + TSS region transcription start site region 126720
Tssr126721 14 76477105 to 76477140 35 + TSS region transcription start site region 126721
Tssr126722 14 76479296 to 76479307 11 + TSS region transcription start site region 126722
Tssr126723 14 76487719 to 76487748 29 + TSS region transcription start site region 126723
Tssr126724 14 76487759 to 76487772 13 + TSS region transcription start site region 126724
Tssr126725 14 76488537 to 76488541 4 + TSS region transcription start site region 126725
Cpgi6756 14 76504096 to 76504676 580 CpG island CpG island 6756
Tssr126726 14 76504185 to 76504249 64 + TSS region transcription start site region 126726
Tssr126727 14 76504506 to 76504521 15 + TSS region transcription start site region 126727
Tssr126728 14 76504549 to 76504560 11 + TSS region transcription start site region 126728
Cpgi6757 14 76505776 to 76506030 254 CpG island CpG island 6757
Tssr129809 14 76506475 to 76506508 33 - TSS region transcription start site region 129809
Tssr129810 14 76506621 to 76506632 11 - TSS region transcription start site region 129810
Tssr126729 14 76507145 to 76507164 19 + TSS region transcription start site region 126729
Tssr126730 14 76507421 to 76507443 22 + TSS region transcription start site region 126730
4930444M15Rik 14 76514558 to 76520855 6297 - lincRNA gene RIKEN cDNA 4930444M15 gene
Tssr129811 14 76515485 to 76515506 21 - TSS region transcription start site region 129811
Tssr129812 14 76515520 to 76515535 15 - TSS region transcription start site region 129812
Tssr126731 14 76515942 to 76515953 11 + TSS region transcription start site region 126731
Tssr126732 14 76515976 to 76515997 21 + TSS region transcription start site region 126732
Tssr129813 14 76520809 to 76520820 11 - TSS region transcription start site region 129813
Tssr129814 14 76520850 to 76520862 12 - TSS region transcription start site region 129814
E130202H07Rik 14 76526592 to 76530746 4154 + lincRNA gene RIKEN cDNA E130202H07 gene
Serp2 14 76532814 to 76556889 24075 - protein coding gene stress-associated endoplasmic reticulum protein family member 2
Gm36845 14 76533240 to 76534206 966 + lncRNA gene predicted gene, 36845
Cpgi6758 14 76556125 to 76557447 1322 CpG island CpG island 6758
Tssr129815 14 76556642 to 76556653 11 - TSS region transcription start site region 129815
Tssr129816 14 76556662 to 76556716 54 - TSS region transcription start site region 129816
Tssr4484 14 76556854 to 76556865 11 - TSS region transcription start site region 4484
Tssr129817 14 76556883 to 76556890 7 - TSS region transcription start site region 129817
Tssr129818 14 76556907 to 76556918 11 - TSS region transcription start site region 129818
Tssr129819 14 76575970 to 76576006 36 - TSS region transcription start site region 129819
D14Mit91 14 76590424 to 76590572 148 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 91
Tssr126733 14 76599750 to 76599760 10 + TSS region transcription start site region 126733
Tssr4485 14 76610565 to 76610573 8 - TSS region transcription start site region 4485
D14Mit69 14 76624124 to 76624266 142 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 69
Fkbp1a-ps1 14 76636537 to 76636864 327 - pseudogene FK506 binding protein 1a, pseudogene 1
1700105F02Rik 14 76642032 to 76677362 35330 - lncRNA gene RIKEN cDNA 1700105F02 gene
Tssr126734 14 76645657 to 76645668 11 + TSS region transcription start site region 126734
Tssr4486 14 76671660 to 76671665 5 + TSS region transcription start site region 4486
Tssr129820 14 76673844 to 76673865 21 - TSS region transcription start site region 129820
Tssr126735 14 76674294 to 76674308 14 + TSS region transcription start site region 126735
Tssr126736 14 76674348 to 76674362 14 + TSS region transcription start site region 126736
1700108F19Rik 14 76677568 to 76687108 9540 + lncRNA gene RIKEN cDNA 1700108F19 gene
Tssr126737 14 76677573 to 76677594 21 + TSS region transcription start site region 126737
Tssr126738 14 76687286 to 76687301 15 + TSS region transcription start site region 126738
Tssr126739 14 76690624 to 76690629 5 + TSS region transcription start site region 126739
Tssr129821 14 76693788 to 76693798 10 - TSS region transcription start site region 129821
Tssr4487 14 76693979 to 76693991 12 - TSS region transcription start site region 4487
Tssr126740 14 76694194 to 76694210 16 + TSS region transcription start site region 126740
Tssr126741 14 76694227 to 76694241 14 + TSS region transcription start site region 126741
Tssr129822 14 76695025 to 76695033 8 - TSS region transcription start site region 129822
Tssr126742 14 76722086 to 76722104 18 + TSS region transcription start site region 126742
Tssr126743 14 76735376 to 76735381 5 + TSS region transcription start site region 126743
4930431P22Rik 14 76760131 to 76762217 2086 + lincRNA gene RIKEN cDNA 4930431P22 gene
Tssr126744 14 76780800 to 76780829 29 + TSS region transcription start site region 126744
Gm30246 14 76780827 to 76784212 3385 + lincRNA gene predicted gene, 30246
Tssr126745 14 76780837 to 76780840 3 + TSS region transcription start site region 126745
Tssr126746 14 76780849 to 76780857 8 + TSS region transcription start site region 126746
Tssr129823 14 76821740 to 76821753 13 - TSS region transcription start site region 129823
Gm30365 14 76826678 to 76838141 11463 - lncRNA gene predicted gene, 30365
Gm48968 14 76832821 to 76853299 20478 + lincRNA gene predicted gene, 48968
Gm48969 14 76861571 to 76875175 13604 + lincRNA gene predicted gene, 48969
Gm4291 14 76976359 to 76976887 528 + pseudogene predicted gene 4291
Lacc1 14 77024200 to 77036904 12704 - protein coding gene laccase domain containing 1
Tssr129824 14 77024474 to 77024491 17 - TSS region transcription start site region 129824
Tssr129825 14 77024935 to 77024950 15 - TSS region transcription start site region 129825
Tssr129826 14 77029567 to 77029590 23 - TSS region transcription start site region 129826
Tssr129827 14 77031789 to 77031809 20 - TSS region transcription start site region 129827
Tssr129828 14 77032453 to 77032465 12 - TSS region transcription start site region 129828
Tssr129829 14 77032503 to 77032516 13 - TSS region transcription start site region 129829
Tssr129830 14 77033333 to 77033347 14 - TSS region transcription start site region 129830
Tssr129831 14 77033350 to 77033361 11 - TSS region transcription start site region 129831
Tssr129832 14 77033364 to 77033394 30 - TSS region transcription start site region 129832
Cpgi6759 14 77036130 to 77037023 893 CpG island CpG island 6759
Tssr129833 14 77036552 to 77036561 9 - TSS region transcription start site region 129833
Tssr129834 14 77036568 to 77036579 11 - TSS region transcription start site region 129834
Tssr129835 14 77036616 to 77036693 77 - TSS region transcription start site region 129835
Tssr126747 14 77036746 to 77036786 40 + TSS region transcription start site region 126747
Ccdc122 14 77036772 to 77112257 75485 + protein coding gene coiled-coil domain containing 122
Tssr129836 14 77036850 to 77036886 36 - TSS region transcription start site region 129836
Tssr129837 14 77036898 to 77036923 25 - TSS region transcription start site region 129837
Tssr129838 14 77036926 to 77036953 27 - TSS region transcription start site region 129838
Tssr129839 14 77036979 to 77036988 9 - TSS region transcription start site region 129839
Cpgi6760 14 77156161 to 77157967 1806 CpG island CpG island 6760
Tssr126748 14 77156733 to 77156823 90 + TSS region transcription start site region 126748
Enox1 14 77156763 to 77721760 564997 + protein coding gene ecto-NOX disulfide-thiol exchanger 1
Tssr126749 14 77156830 to 77156843 13 + TSS region transcription start site region 126749
Tssr4488 14 77156866 to 77156875 9 + TSS region transcription start site region 4488
Cpgi6761 14 77174559 to 77174763 204 CpG island CpG island 6761
Tssr4489 14 77176919 to 77176920 1 + TSS region transcription start site region 4489
Gm10132 14 77251847 to 77252314 467 - pseudogene predicted gene 10132
Tssr129840 14 77252327 to 77252328 1 - TSS region transcription start site region 129840
Gm49001 14 77342602 to 77344854 2252 - pseudogene predicted gene, 49001
Gm41217 14 77367661 to 77371318 3657 - lncRNA gene predicted gene, 41217
D14Mit70 14 77379052 to 77379177 125 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 70
Gm49002 14 77438586 to 77440976 2390 - antisense lncRNA gene predicted gene, 49002
Tssr126750 14 77473870 to 77473875 5 + TSS region transcription start site region 126750
Gm6994 14 77479483 to 77506868 27385 - antisense lncRNA gene predicted gene 6994
Tssr126751 14 77519948 to 77519959 11 + TSS region transcription start site region 126751
Tssr126752 14 77520130 to 77520139 9 + TSS region transcription start site region 126752
Tssr126753 14 77520140 to 77520169 29 + TSS region transcription start site region 126753
Tssr126754 14 77520172 to 77520204 32 + TSS region transcription start site region 126754
Tssr126755 14 77520217 to 77520232 15 + TSS region transcription start site region 126755
n-R5s48 14 77530398 to 77530507 109 + rRNA gene nuclear encoded rRNA 5S 48
Cpgi6762 14 77539573 to 77539862 289 CpG island CpG island 6762
Tssr4490 14 77539747 to 77539791 44 + TSS region transcription start site region 4490
Gm23823 14 77540642 to 77540765 123 - snoRNA gene predicted gene, 23823
Gm49003 14 77578544 to 77633860 55316 - antisense lncRNA gene predicted gene, 49003
Cpgi6763 14 77582412 to 77582625 213 CpG island CpG island 6763
Tssr126756 14 77663271 to 77663276 5 + TSS region transcription start site region 126756
Gm30467 14 77781072 to 77790663 9591 + lincRNA gene predicted gene, 30467
Gm1587 14 77793945 to 77798968 5023 - protein coding gene predicted gene 1587
6330531I01Rik 14 77820689 to 77822321 1632 unclassified gene RIKEN cDNA 6330531I01 gene
2900011G08Rik 14 77823737 to 77824963 1226 unclassified gene RIKEN cDNA 2900011G08 gene
Dnajc15 14 77826217 to 77874917 48700 - protein coding gene DnaJ heat shock protein family (Hsp40) member C15
Tssr129841 14 77844355 to 77844360 5 - TSS region transcription start site region 129841
Tssr129842 14 77856294 to 77856298 4 - TSS region transcription start site region 129842
Tssr129843 14 77856966 to 77856991 25 - TSS region transcription start site region 129843
Tssr129844 14 77861288 to 77861296 8 - TSS region transcription start site region 129844
Tssr129845 14 77861316 to 77861343 27 - TSS region transcription start site region 129845
Cpgi6764 14 77874674 to 77875067 393 CpG island CpG island 6764
Tssr129846 14 77874845 to 77874856 11 - TSS region transcription start site region 129846
Tssr129847 14 77874866 to 77874877 11 - TSS region transcription start site region 129847
Tssr129848 14 77874887 to 77874941 54 - TSS region transcription start site region 129848
Tssr129849 14 77875053 to 77875067 14 - TSS region transcription start site region 129849
Tssr129850 14 77875093 to 77875108 15 - TSS region transcription start site region 129850
Tssr129851 14 77875127 to 77875134 7 - TSS region transcription start site region 129851
Epsti1 14 77904239 to 78002656 98417 + protein coding gene epithelial stromal interaction 1 (breast)
Tssr126757 14 77904349 to 77904360 11 + TSS region transcription start site region 126757
Tssr126758 14 77904365 to 77904441 76 + TSS region transcription start site region 126758
Tssr129852 14 77904394 to 77904403 9 - TSS region transcription start site region 129852
Tssr126759 14 77904448 to 77904453 5 + TSS region transcription start site region 126759
Tssr126760 14 77904474 to 77904503 29 + TSS region transcription start site region 126760
Tssr126761 14 77904519 to 77904533 14 + TSS region transcription start site region 126761
Tssr126762 14 77904892 to 77904902 10 + TSS region transcription start site region 126762
Tssr126763 14 77915160 to 77915165 5 + TSS region transcription start site region 126763
D14Mit242 14 77923492 to 77923613 121 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 242
Tssr126764 14 77931240 to 77931282 42 + TSS region transcription start site region 126764
Tssr126765 14 77940381 to 77940383 2 + TSS region transcription start site region 126765