Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:75854570-76512581

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82 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gtf2f2 14 75896937 to 76010865 113928 - protein coding gene general transcription factor IIF, polypeptide 2
Gm9209 14 75929557 to 75931618 2061 - pseudogene predicted gene 9209
Kctd4 14 75955003 to 75965217 10214 + protein coding gene potassium channel tetramerisation domain containing 4
Tssr126694 14 75955011 to 75955016 5 + TSS region transcription start site region 126694
Tssr126695 14 75955050 to 75955063 13 + TSS region transcription start site region 126695
Tssr129796 14 75958428 to 75958432 4 - TSS region transcription start site region 129796
Tssr126696 14 75962390 to 75962401 11 + TSS region transcription start site region 126696
Tssr126697 14 75962415 to 75962447 32 + TSS region transcription start site region 126697
Tssr126698 14 75962456 to 75962484 28 + TSS region transcription start site region 126698
Gm41213 14 75969636 to 75974202 4566 + lncRNA gene predicted gene, 41213
Gm25517 14 75972486 to 75972619 133 - snoRNA gene predicted gene, 25517
Cpgi6747 14 76010436 to 76011096 660 CpG island CpG island 6747
Tssr129797 14 76010617 to 76010631 14 - TSS region transcription start site region 129797
Tssr129798 14 76010835 to 76010862 27 - TSS region transcription start site region 129798
Tssr129799 14 76010863 to 76010931 68 - TSS region transcription start site region 129799
Gm36429 14 76011005 to 76012112 1107 + lncRNA gene predicted gene, 36429
Tssr126699 14 76026088 to 76026128 40 + TSS region transcription start site region 126699
Gm36477 14 76033485 to 76054372 20887 + lncRNA gene predicted gene, 36477
Tssr129800 14 76050205 to 76050206 1 - TSS region transcription start site region 129800
Tssr126700 14 76081692 to 76081696 4 + TSS region transcription start site region 126700
Tssr126701 14 76084381 to 76084420 39 + TSS region transcription start site region 126701
Gpalpp1 14 76086236 to 76110760 24524 - protein coding gene GPALPP motifs containing 1
Tssr129801 14 76098536 to 76098546 10 - TSS region transcription start site region 129801
Tssr129802 14 76104761 to 76104765 4 - TSS region transcription start site region 129802
Tssr129803 14 76109034 to 76109064 30 - TSS region transcription start site region 129803
Cpgi6748 14 76110320 to 76111467 1147 CpG island CpG island 6748
Tssr129804 14 76110720 to 76110731 11 - TSS region transcription start site region 129804
Tssr129805 14 76110760 to 76110818 58 - TSS region transcription start site region 129805
Tssr129806 14 76110820 to 76110831 11 - TSS region transcription start site region 129806
Tssr126702 14 76110885 to 76110928 43 + TSS region transcription start site region 126702
Nufip1 14 76110891 to 76137379 26488 + protein coding gene nuclear fragile X mental retardation protein interacting protein 1
Tssr126703 14 76114813 to 76114860 47 + TSS region transcription start site region 126703
Cpgi6749 14 76152073 to 76152852 779 CpG island CpG island 6749
Tssr129807 14 76152645 to 76152666 21 - TSS region transcription start site region 129807
n-TEttc6 14 76152774 to 76152845 71 + tRNA gene nuclear encoded tRNA glutamic acid 6 (anticodon TTC)
Gm36534 14 76164570 to 76202581 38011 + lncRNA gene predicted gene, 36534
Cpgi6750 14 76165009 to 76165167 158 CpG island CpG island 6750
Gm41214 14 76201997 to 76205198 3201 - lncRNA gene predicted gene, 41214
Gm36583 14 76225446 to 76245183 19737 - lncRNA gene predicted gene, 36583
Rps2-ps6 14 76236691 to 76237545 854 - pseudogene ribosomal protein S2, pseudogene 6
Tssr129808 14 76237570 to 76237575 5 - TSS region transcription start site region 129808
2900040C04Rik 14 76251457 to 76252327 870 + lincRNA gene RIKEN cDNA 2900040C04 gene
Tssr126704 14 76251475 to 76251486 11 + TSS region transcription start site region 126704
Tssr126705 14 76251491 to 76251494 3 + TSS region transcription start site region 126705
Tssr126706 14 76251562 to 76251569 7 + TSS region transcription start site region 126706
Cpgi6751 14 76255059 to 76255355 296 CpG island CpG island 6751
Cpgi6752 14 76279509 to 76279732 223 CpG island CpG island 6752
Tssr126707 14 76312255 to 76312264 9 + TSS region transcription start site region 126707
D14Mit240 14 76329096 to 76329192 96 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 240
Gm41215 14 76367085 to 76369988 2903 - lncRNA gene predicted gene, 41215
Cpgi6753 14 76368085 to 76368306 221 CpG island CpG island 6753
Cpgi6754 14 76413833 to 76416841 3008 CpG island CpG island 6754
Tssr126708 14 76414732 to 76414793 61 + TSS region transcription start site region 126708
Tssr126709 14 76414794 to 76414823 29 + TSS region transcription start site region 126709
Tssr126710 14 76414929 to 76414974 45 + TSS region transcription start site region 126710
Tsc22d1 14 76414961 to 76507765 92804 + protein coding gene TSC22 domain family, member 1
Tssr126711 14 76414977 to 76414996 19 + TSS region transcription start site region 126711
Tssr126712 14 76415076 to 76415091 15 + TSS region transcription start site region 126712
Tssr126713 14 76415349 to 76415374 25 + TSS region transcription start site region 126713
Tssr126714 14 76427313 to 76427321 8 + TSS region transcription start site region 126714
D430022A14Rik 14 76430959 to 76435158 4199 unclassified gene RIKEN cDNA D430022A14 gene
Tssr126715 14 76433178 to 76433182 4 + TSS region transcription start site region 126715
Tssr126716 14 76436256 to 76436305 49 + TSS region transcription start site region 126716
Tssr126717 14 76438412 to 76438417 5 + TSS region transcription start site region 126717
Tssr126718 14 76442709 to 76442714 5 + TSS region transcription start site region 126718
Cpgi6755 14 76471372 to 76471701 329 CpG island CpG island 6755
Tssr126719 14 76476888 to 76476905 17 + TSS region transcription start site region 126719
Tssr126720 14 76476913 to 76476930 17 + TSS region transcription start site region 126720
Tssr126721 14 76477105 to 76477140 35 + TSS region transcription start site region 126721
Tssr126722 14 76479296 to 76479307 11 + TSS region transcription start site region 126722
Tssr126723 14 76487719 to 76487748 29 + TSS region transcription start site region 126723
Tssr126724 14 76487759 to 76487772 13 + TSS region transcription start site region 126724
Tssr126725 14 76488537 to 76488541 4 + TSS region transcription start site region 126725
Cpgi6756 14 76504096 to 76504676 580 CpG island CpG island 6756
Tssr126726 14 76504185 to 76504249 64 + TSS region transcription start site region 126726
Tssr126727 14 76504506 to 76504521 15 + TSS region transcription start site region 126727
Tssr126728 14 76504549 to 76504560 11 + TSS region transcription start site region 126728
Cpgi6757 14 76505776 to 76506030 254 CpG island CpG island 6757
Tssr129809 14 76506475 to 76506508 33 - TSS region transcription start site region 129809
Tssr129810 14 76506621 to 76506632 11 - TSS region transcription start site region 129810
Tssr126729 14 76507145 to 76507164 19 + TSS region transcription start site region 126729
Tssr126730 14 76507421 to 76507443 22 + TSS region transcription start site region 126730