Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:75306147-76216163

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110 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zc3h13 14 75284373 to 75344426 60053 + protein coding gene zinc finger CCCH type containing 13
Tssr126674 14 75315963 to 75315968 5 + TSS region transcription start site region 126674
Gm46470 14 75320216 to 75320626 410 - pseudogene predicted gene, 46470
Tssr126675 14 75323846 to 75323851 5 + TSS region transcription start site region 126675
Tssr126676 14 75327369 to 75327383 14 + TSS region transcription start site region 126676
Cpgi6740 14 75327700 to 75328081 381 CpG island CpG island 6740
Tssr129774 14 75327839 to 75327929 90 - TSS region transcription start site region 129774
Tssr129775 14 75328032 to 75328079 47 - TSS region transcription start site region 129775
Tssr126677 14 75330421 to 75330439 18 + TSS region transcription start site region 126677
Tssr126678 14 75330957 to 75330978 21 + TSS region transcription start site region 126678
Tssr126679 14 75331775 to 75331793 18 + TSS region transcription start site region 126679
Gm49200 14 75358982 to 75400446 41464 - lincRNA gene predicted gene, 49200
Tssr126680 14 75446667 to 75446671 4 + TSS region transcription start site region 126680
Gm41212 14 75452217 to 75456807 4590 - lncRNA gene predicted gene, 41212
Tssr126681 14 75455921 to 75455954 33 + TSS region transcription start site region 126681
Tssr126682 14 75455957 to 75455996 39 + TSS region transcription start site region 126682
Siah3 14 75455982 to 75526141 70159 + protein coding gene siah E3 ubiquitin protein ligase family member 3
Gm35966 14 75519418 to 75525772 6354 - lncRNA gene predicted gene, 35966
Cpgi6741 14 75525744 to 75526154 410 CpG island CpG island 6741
Gm36060 14 75549326 to 75553049 3723 - lncRNA gene predicted gene, 36060
Spert 14 75582877 to 75593116 10239 - protein coding gene spermatid associated
Tssr129776 14 75591970 to 75591989 19 - TSS region transcription start site region 129776
Tssr129777 14 75593010 to 75593019 9 - TSS region transcription start site region 129777
Tssr129778 14 75593021 to 75593041 20 - TSS region transcription start site region 129778
Tssr129779 14 75593119 to 75593158 39 - TSS region transcription start site region 129779
Tssr129780 14 75593184 to 75593192 8 - TSS region transcription start site region 129780
Gm36219 14 75638841 to 75645645 6804 - lncRNA gene predicted gene, 36219
Erich6b 14 75642259 to 75667137 24878 + protein coding gene glutamate rich 6B
Gm23622 14 75651423 to 75651529 106 - snRNA gene predicted gene, 23622
Tssr129781 14 75671053 to 75671064 11 - TSS region transcription start site region 129781
Cog3 14 75702350 to 75754517 52167 - protein coding gene component of oligomeric golgi complex 3
Gm11054 14 75709180 to 75712252 3072 unclassified gene predicted gene 11054
Gm24876 14 75745849 to 75745940 91 - rRNA gene predicted gene, 24876
Cpgi6742 14 75753816 to 75754718 902 CpG island CpG island 6742
Gm9914 14 75754137 to 75755900 1763 protein coding gene predicted gene 9914
Tssr129782 14 75754445 to 75754462 17 - TSS region transcription start site region 129782
Tssr129783 14 75754475 to 75754563 88 - TSS region transcription start site region 129783
Slc25a30 14 75760117 to 75787037 26920 - protein coding gene solute carrier family 25, member 30
Tssr129784 14 75760963 to 75760971 8 - TSS region transcription start site region 129784
Tssr129785 14 75761147 to 75761163 16 - TSS region transcription start site region 129785
Tssr129786 14 75761190 to 75761233 43 - TSS region transcription start site region 129786
Tssr129787 14 75761380 to 75761407 27 - TSS region transcription start site region 129787
Tssr129788 14 75775494 to 75775498 4 - TSS region transcription start site region 129788
Cpgi6743 14 75786576 to 75787330 754 CpG island CpG island 6743
Tssr129789 14 75786966 to 75786980 14 - TSS region transcription start site region 129789
Tssr129790 14 75786991 to 75787011 20 - TSS region transcription start site region 129790
Tssr129791 14 75787031 to 75787042 11 - TSS region transcription start site region 129791
Gm36271 14 75802439 to 75804324 1885 - lncRNA gene predicted gene, 36271
Cpgi6744 14 75828915 to 75829153 238 CpG island CpG island 6744
Cpgi6745 14 75829456 to 75829708 252 CpG island CpG island 6745
D14Mit116 14 75833892 to 75834031 139 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 116
Tssr126683 14 75834489 to 75834512 23 + TSS region transcription start site region 126683
Tssr129792 14 75834829 to 75834837 8 - TSS region transcription start site region 129792
Tssr129793 14 75834841 to 75834872 31 - TSS region transcription start site region 129793
Tssr126684 14 75834953 to 75834967 14 + TSS region transcription start site region 126684
Gm48931 14 75841486 to 75841714 228 + pseudogene predicted gene, 48931
Gm4285 14 75843379 to 75844964 1585 - antisense lncRNA gene predicted gene 4285
Cpgi6746 14 75844707 to 75846102 1395 CpG island CpG island 6746
Tssr129794 14 75844935 to 75844948 13 - TSS region transcription start site region 129794
Tssr129795 14 75844952 to 75844998 46 - TSS region transcription start site region 129795
Tssr126685 14 75845103 to 75845130 27 + TSS region transcription start site region 126685
Tssr126686 14 75845137 to 75845165 28 + TSS region transcription start site region 126686
Tssr4483 14 75845156 to 75845175 19 - TSS region transcription start site region 4483
Tpt1 14 75845256 to 75848303 3047 + protein coding gene tumor protein, translationally-controlled 1
Tssr126687 14 75845279 to 75845286 7 + TSS region transcription start site region 126687
Tssr126688 14 75845296 to 75845307 11 + TSS region transcription start site region 126688
Tssr126689 14 75845321 to 75845347 26 + TSS region transcription start site region 126689
Tssr126690 14 75845899 to 75845943 44 + TSS region transcription start site region 126690
Tssr126691 14 75845961 to 75845970 9 + TSS region transcription start site region 126691
Tssr126692 14 75846143 to 75846147 4 + TSS region transcription start site region 126692
Snora31 14 75847923 to 75848034 111 + snoRNA gene small nucleolar RNA, H/ACA box 31
Tssr126693 14 75849562 to 75849563 1 + TSS region transcription start site region 126693
Gtf2f2 14 75896937 to 76010865 113928 - protein coding gene general transcription factor IIF, polypeptide 2
Gm9209 14 75929557 to 75931618 2061 - pseudogene predicted gene 9209
Kctd4 14 75955003 to 75965217 10214 + protein coding gene potassium channel tetramerisation domain containing 4
Tssr126694 14 75955011 to 75955016 5 + TSS region transcription start site region 126694
Tssr126695 14 75955050 to 75955063 13 + TSS region transcription start site region 126695
Tssr129796 14 75958428 to 75958432 4 - TSS region transcription start site region 129796
Tssr126696 14 75962390 to 75962401 11 + TSS region transcription start site region 126696
Tssr126697 14 75962415 to 75962447 32 + TSS region transcription start site region 126697
Tssr126698 14 75962456 to 75962484 28 + TSS region transcription start site region 126698
Gm41213 14 75969636 to 75974202 4566 + lncRNA gene predicted gene, 41213
Gm25517 14 75972486 to 75972619 133 - snoRNA gene predicted gene, 25517
Cpgi6747 14 76010436 to 76011096 660 CpG island CpG island 6747
Tssr129797 14 76010617 to 76010631 14 - TSS region transcription start site region 129797
Tssr129798 14 76010835 to 76010862 27 - TSS region transcription start site region 129798
Tssr129799 14 76010863 to 76010931 68 - TSS region transcription start site region 129799
Gm36429 14 76011005 to 76012112 1107 + lncRNA gene predicted gene, 36429
Tssr126699 14 76026088 to 76026128 40 + TSS region transcription start site region 126699
Gm36477 14 76033485 to 76054372 20887 + lncRNA gene predicted gene, 36477
Tssr129800 14 76050205 to 76050206 1 - TSS region transcription start site region 129800
Tssr126700 14 76081692 to 76081696 4 + TSS region transcription start site region 126700
Tssr126701 14 76084381 to 76084420 39 + TSS region transcription start site region 126701
Gpalpp1 14 76086236 to 76110760 24524 - protein coding gene GPALPP motifs containing 1
Tssr129801 14 76098536 to 76098546 10 - TSS region transcription start site region 129801
Tssr129802 14 76104761 to 76104765 4 - TSS region transcription start site region 129802
Tssr129803 14 76109034 to 76109064 30 - TSS region transcription start site region 129803
Cpgi6748 14 76110320 to 76111467 1147 CpG island CpG island 6748
Tssr129804 14 76110720 to 76110731 11 - TSS region transcription start site region 129804
Tssr129805 14 76110760 to 76110818 58 - TSS region transcription start site region 129805
Tssr129806 14 76110820 to 76110831 11 - TSS region transcription start site region 129806
Tssr126702 14 76110885 to 76110928 43 + TSS region transcription start site region 126702
Nufip1 14 76110891 to 76137379 26488 + protein coding gene nuclear fragile X mental retardation protein interacting protein 1
Tssr126703 14 76114813 to 76114860 47 + TSS region transcription start site region 126703
Cpgi6749 14 76152073 to 76152852 779 CpG island CpG island 6749
Tssr129807 14 76152645 to 76152666 21 - TSS region transcription start site region 129807
n-TEttc6 14 76152774 to 76152845 71 + tRNA gene nuclear encoded tRNA glutamic acid 6 (anticodon TTC)
Gm36534 14 76164570 to 76202581 38011 + lncRNA gene predicted gene, 36534
Cpgi6750 14 76165009 to 76165167 158 CpG island CpG island 6750
Gm41214 14 76201997 to 76205198 3201 - lncRNA gene predicted gene, 41214