Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:75286763-79591760

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463 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbconq1 14 64700000 to 77100000 12400000 QTL trabecular bone connectivity QTL 1
Zc3h13 14 75284373 to 75344426 60053 + protein coding gene zinc finger CCCH type containing 13
Tssr126674 14 75315963 to 75315968 5 + TSS region transcription start site region 126674
Gm46470 14 75320216 to 75320626 410 - pseudogene predicted gene, 46470
Tssr126675 14 75323846 to 75323851 5 + TSS region transcription start site region 126675
Tssr126676 14 75327369 to 75327383 14 + TSS region transcription start site region 126676
Cpgi6740 14 75327700 to 75328081 381 CpG island CpG island 6740
Tssr129774 14 75327839 to 75327929 90 - TSS region transcription start site region 129774
Tssr129775 14 75328032 to 75328079 47 - TSS region transcription start site region 129775
Tssr126677 14 75330421 to 75330439 18 + TSS region transcription start site region 126677
Tssr126678 14 75330957 to 75330978 21 + TSS region transcription start site region 126678
Tssr126679 14 75331775 to 75331793 18 + TSS region transcription start site region 126679
Gm49200 14 75358982 to 75400446 41464 - lincRNA gene predicted gene, 49200
Tssr126680 14 75446667 to 75446671 4 + TSS region transcription start site region 126680
Gm41212 14 75452217 to 75456807 4590 - lncRNA gene predicted gene, 41212
Tssr126681 14 75455921 to 75455954 33 + TSS region transcription start site region 126681
Tssr126682 14 75455957 to 75455996 39 + TSS region transcription start site region 126682
Siah3 14 75455982 to 75526141 70159 + protein coding gene siah E3 ubiquitin protein ligase family member 3
Gm35966 14 75519418 to 75525772 6354 - lncRNA gene predicted gene, 35966
Cpgi6741 14 75525744 to 75526154 410 CpG island CpG island 6741
Gm36060 14 75549326 to 75553049 3723 - lncRNA gene predicted gene, 36060
Spert 14 75582877 to 75593116 10239 - protein coding gene spermatid associated
Tssr129776 14 75591970 to 75591989 19 - TSS region transcription start site region 129776
Tssr129777 14 75593010 to 75593019 9 - TSS region transcription start site region 129777
Tssr129778 14 75593021 to 75593041 20 - TSS region transcription start site region 129778
Tssr129779 14 75593119 to 75593158 39 - TSS region transcription start site region 129779
Tssr129780 14 75593184 to 75593192 8 - TSS region transcription start site region 129780
Gm36219 14 75638841 to 75645645 6804 - lncRNA gene predicted gene, 36219
Erich6b 14 75642259 to 75667137 24878 + protein coding gene glutamate rich 6B
Gm23622 14 75651423 to 75651529 106 - snRNA gene predicted gene, 23622
Tssr129781 14 75671053 to 75671064 11 - TSS region transcription start site region 129781
Cog3 14 75702350 to 75754517 52167 - protein coding gene component of oligomeric golgi complex 3
Gm11054 14 75709180 to 75712252 3072 unclassified gene predicted gene 11054
Gm24876 14 75745849 to 75745940 91 - rRNA gene predicted gene, 24876
Cpgi6742 14 75753816 to 75754718 902 CpG island CpG island 6742
Gm9914 14 75754137 to 75755900 1763 protein coding gene predicted gene 9914
Tssr129782 14 75754445 to 75754462 17 - TSS region transcription start site region 129782
Tssr129783 14 75754475 to 75754563 88 - TSS region transcription start site region 129783
Slc25a30 14 75760117 to 75787037 26920 - protein coding gene solute carrier family 25, member 30
Tssr129784 14 75760963 to 75760971 8 - TSS region transcription start site region 129784
Tssr129785 14 75761147 to 75761163 16 - TSS region transcription start site region 129785
Tssr129786 14 75761190 to 75761233 43 - TSS region transcription start site region 129786
Tssr129787 14 75761380 to 75761407 27 - TSS region transcription start site region 129787
Tssr129788 14 75775494 to 75775498 4 - TSS region transcription start site region 129788
Cpgi6743 14 75786576 to 75787330 754 CpG island CpG island 6743
Tssr129789 14 75786966 to 75786980 14 - TSS region transcription start site region 129789
Tssr129790 14 75786991 to 75787011 20 - TSS region transcription start site region 129790
Tssr129791 14 75787031 to 75787042 11 - TSS region transcription start site region 129791
Gm36271 14 75802439 to 75804324 1885 - lncRNA gene predicted gene, 36271
Cpgi6744 14 75828915 to 75829153 238 CpG island CpG island 6744
Cpgi6745 14 75829456 to 75829708 252 CpG island CpG island 6745
D14Mit116 14 75833892 to 75834031 139 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 116
Tssr126683 14 75834489 to 75834512 23 + TSS region transcription start site region 126683
Tssr129792 14 75834829 to 75834837 8 - TSS region transcription start site region 129792
Tssr129793 14 75834841 to 75834872 31 - TSS region transcription start site region 129793
Tssr126684 14 75834953 to 75834967 14 + TSS region transcription start site region 126684
Gm48931 14 75841486 to 75841714 228 + pseudogene predicted gene, 48931
Gm4285 14 75843379 to 75844964 1585 - antisense lncRNA gene predicted gene 4285
Cpgi6746 14 75844707 to 75846102 1395 CpG island CpG island 6746
Tssr129794 14 75844935 to 75844948 13 - TSS region transcription start site region 129794
Tssr129795 14 75844952 to 75844998 46 - TSS region transcription start site region 129795
Tssr126685 14 75845103 to 75845130 27 + TSS region transcription start site region 126685
Tssr126686 14 75845137 to 75845165 28 + TSS region transcription start site region 126686
Tssr4483 14 75845156 to 75845175 19 - TSS region transcription start site region 4483
Tpt1 14 75845256 to 75848303 3047 + protein coding gene tumor protein, translationally-controlled 1
Tssr126687 14 75845279 to 75845286 7 + TSS region transcription start site region 126687
Tssr126688 14 75845296 to 75845307 11 + TSS region transcription start site region 126688
Tssr126689 14 75845321 to 75845347 26 + TSS region transcription start site region 126689
Tssr126690 14 75845899 to 75845943 44 + TSS region transcription start site region 126690
Tssr126691 14 75845961 to 75845970 9 + TSS region transcription start site region 126691
Tssr126692 14 75846143 to 75846147 4 + TSS region transcription start site region 126692
Snora31 14 75847923 to 75848034 111 + snoRNA gene small nucleolar RNA, H/ACA box 31
Tssr126693 14 75849562 to 75849563 1 + TSS region transcription start site region 126693
Gtf2f2 14 75896937 to 76010865 113928 - protein coding gene general transcription factor IIF, polypeptide 2
Gm9209 14 75929557 to 75931618 2061 - pseudogene predicted gene 9209
Kctd4 14 75955003 to 75965217 10214 + protein coding gene potassium channel tetramerisation domain containing 4
Tssr126694 14 75955011 to 75955016 5 + TSS region transcription start site region 126694
Tssr126695 14 75955050 to 75955063 13 + TSS region transcription start site region 126695
Tssr129796 14 75958428 to 75958432 4 - TSS region transcription start site region 129796
Tssr126696 14 75962390 to 75962401 11 + TSS region transcription start site region 126696
Tssr126697 14 75962415 to 75962447 32 + TSS region transcription start site region 126697
Tssr126698 14 75962456 to 75962484 28 + TSS region transcription start site region 126698
Gm41213 14 75969636 to 75974202 4566 + lncRNA gene predicted gene, 41213
Gm25517 14 75972486 to 75972619 133 - snoRNA gene predicted gene, 25517
Cpgi6747 14 76010436 to 76011096 660 CpG island CpG island 6747
Tssr129797 14 76010617 to 76010631 14 - TSS region transcription start site region 129797
Tssr129798 14 76010835 to 76010862 27 - TSS region transcription start site region 129798
Tssr129799 14 76010863 to 76010931 68 - TSS region transcription start site region 129799
Gm36429 14 76011005 to 76012112 1107 + lncRNA gene predicted gene, 36429
Tssr126699 14 76026088 to 76026128 40 + TSS region transcription start site region 126699
Gm36477 14 76033485 to 76054372 20887 + lncRNA gene predicted gene, 36477
Tssr129800 14 76050205 to 76050206 1 - TSS region transcription start site region 129800
Tssr126700 14 76081692 to 76081696 4 + TSS region transcription start site region 126700
Tssr126701 14 76084381 to 76084420 39 + TSS region transcription start site region 126701
Gpalpp1 14 76086236 to 76110760 24524 - protein coding gene GPALPP motifs containing 1
Tssr129801 14 76098536 to 76098546 10 - TSS region transcription start site region 129801
Tssr129802 14 76104761 to 76104765 4 - TSS region transcription start site region 129802
Tssr129803 14 76109034 to 76109064 30 - TSS region transcription start site region 129803
Cpgi6748 14 76110320 to 76111467 1147 CpG island CpG island 6748
Tssr129804 14 76110720 to 76110731 11 - TSS region transcription start site region 129804
Tssr129805 14 76110760 to 76110818 58 - TSS region transcription start site region 129805
Tssr129806 14 76110820 to 76110831 11 - TSS region transcription start site region 129806
Tssr126702 14 76110885 to 76110928 43 + TSS region transcription start site region 126702
Nufip1 14 76110891 to 76137379 26488 + protein coding gene nuclear fragile X mental retardation protein interacting protein 1
Tssr126703 14 76114813 to 76114860 47 + TSS region transcription start site region 126703
Cpgi6749 14 76152073 to 76152852 779 CpG island CpG island 6749
Tssr129807 14 76152645 to 76152666 21 - TSS region transcription start site region 129807
n-TEttc6 14 76152774 to 76152845 71 + tRNA gene nuclear encoded tRNA glutamic acid 6 (anticodon TTC)
Gm36534 14 76164570 to 76202581 38011 + lncRNA gene predicted gene, 36534
Cpgi6750 14 76165009 to 76165167 158 CpG island CpG island 6750
Gm41214 14 76201997 to 76205198 3201 - lncRNA gene predicted gene, 41214
Gm36583 14 76225446 to 76245183 19737 - lncRNA gene predicted gene, 36583
Rps2-ps6 14 76236691 to 76237545 854 - pseudogene ribosomal protein S2, pseudogene 6
Tssr129808 14 76237570 to 76237575 5 - TSS region transcription start site region 129808
2900040C04Rik 14 76251457 to 76252327 870 + lincRNA gene RIKEN cDNA 2900040C04 gene
Tssr126704 14 76251475 to 76251486 11 + TSS region transcription start site region 126704
Tssr126705 14 76251491 to 76251494 3 + TSS region transcription start site region 126705
Tssr126706 14 76251562 to 76251569 7 + TSS region transcription start site region 126706
Cpgi6751 14 76255059 to 76255355 296 CpG island CpG island 6751
Cpgi6752 14 76279509 to 76279732 223 CpG island CpG island 6752
Tssr126707 14 76312255 to 76312264 9 + TSS region transcription start site region 126707
D14Mit240 14 76329096 to 76329192 96 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 240
Gm41215 14 76367085 to 76369988 2903 - lncRNA gene predicted gene, 41215
Cpgi6753 14 76368085 to 76368306 221 CpG island CpG island 6753
Cpgi6754 14 76413833 to 76416841 3008 CpG island CpG island 6754
Tssr126708 14 76414732 to 76414793 61 + TSS region transcription start site region 126708
Tssr126709 14 76414794 to 76414823 29 + TSS region transcription start site region 126709
Tssr126710 14 76414929 to 76414974 45 + TSS region transcription start site region 126710
Tsc22d1 14 76414961 to 76507765 92804 + protein coding gene TSC22 domain family, member 1
Tssr126711 14 76414977 to 76414996 19 + TSS region transcription start site region 126711
Tssr126712 14 76415076 to 76415091 15 + TSS region transcription start site region 126712
Tssr126713 14 76415349 to 76415374 25 + TSS region transcription start site region 126713
Tssr126714 14 76427313 to 76427321 8 + TSS region transcription start site region 126714
D430022A14Rik 14 76430959 to 76435158 4199 unclassified gene RIKEN cDNA D430022A14 gene
Tssr126715 14 76433178 to 76433182 4 + TSS region transcription start site region 126715
Tssr126716 14 76436256 to 76436305 49 + TSS region transcription start site region 126716
Tssr126717 14 76438412 to 76438417 5 + TSS region transcription start site region 126717
Tssr126718 14 76442709 to 76442714 5 + TSS region transcription start site region 126718
Cpgi6755 14 76471372 to 76471701 329 CpG island CpG island 6755
Tssr126719 14 76476888 to 76476905 17 + TSS region transcription start site region 126719
Tssr126720 14 76476913 to 76476930 17 + TSS region transcription start site region 126720
Tssr126721 14 76477105 to 76477140 35 + TSS region transcription start site region 126721
Tssr126722 14 76479296 to 76479307 11 + TSS region transcription start site region 126722
Tssr126723 14 76487719 to 76487748 29 + TSS region transcription start site region 126723
Tssr126724 14 76487759 to 76487772 13 + TSS region transcription start site region 126724
Tssr126725 14 76488537 to 76488541 4 + TSS region transcription start site region 126725
Cpgi6756 14 76504096 to 76504676 580 CpG island CpG island 6756
Tssr126726 14 76504185 to 76504249 64 + TSS region transcription start site region 126726
Tssr126727 14 76504506 to 76504521 15 + TSS region transcription start site region 126727
Tssr126728 14 76504549 to 76504560 11 + TSS region transcription start site region 126728
Cpgi6757 14 76505776 to 76506030 254 CpG island CpG island 6757
Tssr129809 14 76506475 to 76506508 33 - TSS region transcription start site region 129809
Tssr129810 14 76506621 to 76506632 11 - TSS region transcription start site region 129810
Tssr126729 14 76507145 to 76507164 19 + TSS region transcription start site region 126729
Tssr126730 14 76507421 to 76507443 22 + TSS region transcription start site region 126730
4930444M15Rik 14 76514558 to 76520855 6297 - lincRNA gene RIKEN cDNA 4930444M15 gene
Tssr129811 14 76515485 to 76515506 21 - TSS region transcription start site region 129811
Tssr129812 14 76515520 to 76515535 15 - TSS region transcription start site region 129812
Tssr126731 14 76515942 to 76515953 11 + TSS region transcription start site region 126731
Tssr126732 14 76515976 to 76515997 21 + TSS region transcription start site region 126732
Tssr129813 14 76520809 to 76520820 11 - TSS region transcription start site region 129813
Tssr129814 14 76520850 to 76520862 12 - TSS region transcription start site region 129814
E130202H07Rik 14 76526592 to 76530746 4154 + lincRNA gene RIKEN cDNA E130202H07 gene
Serp2 14 76532814 to 76556889 24075 - protein coding gene stress-associated endoplasmic reticulum protein family member 2
Gm36845 14 76533240 to 76534206 966 + lncRNA gene predicted gene, 36845
Cpgi6758 14 76556125 to 76557447 1322 CpG island CpG island 6758
Tssr129815 14 76556642 to 76556653 11 - TSS region transcription start site region 129815
Tssr129816 14 76556662 to 76556716 54 - TSS region transcription start site region 129816
Tssr4484 14 76556854 to 76556865 11 - TSS region transcription start site region 4484
Tssr129817 14 76556883 to 76556890 7 - TSS region transcription start site region 129817
Tssr129818 14 76556907 to 76556918 11 - TSS region transcription start site region 129818
Tssr129819 14 76575970 to 76576006 36 - TSS region transcription start site region 129819
D14Mit91 14 76590424 to 76590572 148 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 91
Tssr126733 14 76599750 to 76599760 10 + TSS region transcription start site region 126733
Tssr4485 14 76610565 to 76610573 8 - TSS region transcription start site region 4485
D14Mit69 14 76624124 to 76624266 142 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 69
Fkbp1a-ps1 14 76636537 to 76636864 327 - pseudogene FK506 binding protein 1a, pseudogene 1
1700105F02Rik 14 76642032 to 76677362 35330 - lncRNA gene RIKEN cDNA 1700105F02 gene
Tssr126734 14 76645657 to 76645668 11 + TSS region transcription start site region 126734
Tssr4486 14 76671660 to 76671665 5 + TSS region transcription start site region 4486
Tssr129820 14 76673844 to 76673865 21 - TSS region transcription start site region 129820
Tssr126735 14 76674294 to 76674308 14 + TSS region transcription start site region 126735
Tssr126736 14 76674348 to 76674362 14 + TSS region transcription start site region 126736
1700108F19Rik 14 76677568 to 76687108 9540 + lncRNA gene RIKEN cDNA 1700108F19 gene
Tssr126737 14 76677573 to 76677594 21 + TSS region transcription start site region 126737
Tssr126738 14 76687286 to 76687301 15 + TSS region transcription start site region 126738
Tssr126739 14 76690624 to 76690629 5 + TSS region transcription start site region 126739
Tssr129821 14 76693788 to 76693798 10 - TSS region transcription start site region 129821
Tssr4487 14 76693979 to 76693991 12 - TSS region transcription start site region 4487
Tssr126740 14 76694194 to 76694210 16 + TSS region transcription start site region 126740
Tssr126741 14 76694227 to 76694241 14 + TSS region transcription start site region 126741
Tssr129822 14 76695025 to 76695033 8 - TSS region transcription start site region 129822
Tssr126742 14 76722086 to 76722104 18 + TSS region transcription start site region 126742
Tssr126743 14 76735376 to 76735381 5 + TSS region transcription start site region 126743
4930431P22Rik 14 76760131 to 76762217 2086 + lincRNA gene RIKEN cDNA 4930431P22 gene
Tssr126744 14 76780800 to 76780829 29 + TSS region transcription start site region 126744
Gm30246 14 76780827 to 76784212 3385 + lincRNA gene predicted gene, 30246
Tssr126745 14 76780837 to 76780840 3 + TSS region transcription start site region 126745
Tssr126746 14 76780849 to 76780857 8 + TSS region transcription start site region 126746
Tssr129823 14 76821740 to 76821753 13 - TSS region transcription start site region 129823