Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:7278930-8269201

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120 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm3739 14 7293648 to 7315049 21401 - protein coding gene predicted gene 3739
Cpgi6149 14 7315155 to 7315350 195 CpG island CpG island 6149
Gm5797 14 7323988 to 7332395 8407 - protein coding gene predicted gene 5797
Gm8374 14 7362097 to 7365134 3037 - protein coding gene predicted gene 8374
4930521O11Rik 14 7362101 to 7412447 50346 - unclassified gene RIKEN cDNA 4930521O11 gene
Gm10339 14 7374667 to 7412375 37708 - lincRNA gene predicted gene 10339
Gm41090 14 7377677 to 7399572 21895 + lncRNA gene predicted gene, 41090
4933406F09Rik 14 7412473 to 7422685 10212 + lincRNA gene RIKEN cDNA 4933406F09 gene
Gm8379 14 7418908 to 7420099 1191 + pseudogene predicted gene 8379
Gm18575 14 7437314 to 7438448 1134 + pseudogene predicted gene, 18575
Gm3755 14 7440924 to 7450917 9993 - protein coding gene predicted gene 3755
Gm3752 14 7467424 to 7477425 10001 - protein coding gene predicted gene 3752
Gm3760 14 7498713 to 7506148 7435 - pseudogene predicted gene 3760
Gm46467 14 7536187 to 7537066 879 - lncRNA gene predicted gene, 46467
Gm3558 14 7545151 to 7568566 23415 - protein coding gene predicted gene 3558
Gm17121 14 7565260 to 7566106 846 + pseudogene predicted gene 17121
Gm10338 14 7581699 to 7595529 13830 - protein coding gene predicted gene 10338
Gm47876 14 7627888 to 7628386 498 + pseudogene predicted gene, 47876
Gm10128 14 7640895 to 7643972 3077 - pseudogene predicted gene 10128
Gm38418 14 7643088 to 7658948 15860 - protein coding gene predicted gene, 38418
Gm16741 14 7749945 to 7775528 25583 + lincRNA gene predicted gene, 16741
Gm10044 14 7755325 to 7792342 37017 - unclassified non-coding RNA gene predicted gene 10044
Cpgi6150 14 7773930 to 7774201 271 CpG island CpG island 6150
Cpgi6151 14 7791347 to 7792090 743 CpG island CpG island 6151
Tssr124205 14 7791415 to 7791422 7 + TSS region transcription start site region 124205
Tssr124206 14 7791428 to 7791433 5 + TSS region transcription start site region 124206
Tssr124207 14 7791439 to 7791442 3 + TSS region transcription start site region 124207
Tssr124208 14 7791451 to 7791487 36 + TSS region transcription start site region 124208
Tssr124209 14 7791488 to 7791493 5 + TSS region transcription start site region 124209
Tssr124210 14 7791514 to 7791515 1 + TSS region transcription start site region 124210
Gm26661 14 7791587 to 7792057 470 + protein coding gene predicted gene, 26661
Tssr127381 14 7791768 to 7791778 10 - TSS region transcription start site region 127381
Cpgi6152 14 7801136 to 7801391 255 CpG island CpG island 6152
Tssr124211 14 7801141 to 7801145 4 + TSS region transcription start site region 124211
Gm8396 14 7801208 to 7802030 822 + pseudogene predicted gene 8396
Tssr127382 14 7808308 to 7808317 9 - TSS region transcription start site region 127382
Cpgi6153 14 7817713 to 7819061 1348 CpG island CpG island 6153
Flnb 14 7817957 to 7951588 133631 + protein coding gene filamin, beta
Tssr124212 14 7817974 to 7817994 20 + TSS region transcription start site region 124212
Tssr124213 14 7818004 to 7818018 14 + TSS region transcription start site region 124213
Tssr124214 14 7818055 to 7818064 9 + TSS region transcription start site region 124214
Tssr127383 14 7843107 to 7843120 13 - TSS region transcription start site region 127383
Tssr124215 14 7847896 to 7847930 34 + TSS region transcription start site region 124215
Tssr127384 14 7851535 to 7851564 29 - TSS region transcription start site region 127384
Tssr127385 14 7858509 to 7858540 31 - TSS region transcription start site region 127385
Tssr124216 14 7858610 to 7858656 46 + TSS region transcription start site region 124216
Tssr124217 14 7890615 to 7890624 9 + TSS region transcription start site region 124217
Tssr124218 14 7924235 to 7924246 11 + TSS region transcription start site region 124218
Tssr124219 14 7937286 to 7937297 11 + TSS region transcription start site region 124219
Tssr124220 14 7941648 to 7941659 11 + TSS region transcription start site region 124220
Tssr124221 14 7951192 to 7951222 30 + TSS region transcription start site region 124221
Gm45521 14 7957288 to 7960636 3348 + protein coding gene predicted gene 45521
Tssr124222 14 7957289 to 7957304 15 + TSS region transcription start site region 124222
Dnase1l3 14 7965187 to 7994765 29578 - protein coding gene deoxyribonuclease 1-like 3
Tssr127386 14 7967408 to 7967419 11 - TSS region transcription start site region 127386
Tssr127387 14 7967712 to 7967727 15 - TSS region transcription start site region 127387
Tssr127388 14 7994005 to 7994020 15 - TSS region transcription start site region 127388
Tssr127389 14 7994135 to 7994150 15 - TSS region transcription start site region 127389
Tssr127390 14 7994191 to 7994217 26 - TSS region transcription start site region 127390
Tssr127391 14 7994222 to 7994227 5 - TSS region transcription start site region 127391
Tssr127392 14 7994537 to 7994554 17 - TSS region transcription start site region 127392
Tssr127393 14 7994563 to 7994584 21 - TSS region transcription start site region 127393
Tssr127394 14 7994587 to 7994596 9 - TSS region transcription start site region 127394
Gm30244 14 7996943 to 8004255 7312 - lncRNA gene predicted gene, 30244
Cpgi6154 14 8002557 to 8003339 782 CpG island CpG island 6154
Tssr124223 14 8002890 to 8002946 56 + TSS region transcription start site region 124223
Abhd6 14 8002902 to 8056763 53861 + protein coding gene abhydrolase domain containing 6
Tssr124224 14 8002949 to 8002979 30 + TSS region transcription start site region 124224
Tssr127395 14 8004036 to 8004045 9 - TSS region transcription start site region 127395
Tssr127396 14 8004050 to 8004057 7 - TSS region transcription start site region 127396
Tssr124225 14 8006532 to 8006541 9 + TSS region transcription start site region 124225
Tssr124226 14 8006590 to 8006602 12 + TSS region transcription start site region 124226
Tssr124227 14 8016534 to 8016549 15 + TSS region transcription start site region 124227
Tssr124228 14 8016560 to 8016588 28 + TSS region transcription start site region 124228
Tssr124229 14 8016634 to 8016680 46 + TSS region transcription start site region 124229
Tssr124230 14 8049540 to 8049544 4 + TSS region transcription start site region 124230
Gm41094 14 8054018 to 8055505 1487 - lncRNA gene predicted gene, 41094
Tssr124231 14 8063241 to 8063261 20 + TSS region transcription start site region 124231
A230065C20Rik 14 8063259 to 8065244 1985 unclassified non-coding RNA gene RIKEN cDNA A230065C20 gene
Cpgi6155 14 8080138 to 8080956 818 CpG island CpG island 6155
Tssr124232 14 8080315 to 8080385 70 + TSS region transcription start site region 124232
Rpp14 14 8080367 to 8091834 11467 + protein coding gene ribonuclease P 14 subunit
Tssr124233 14 8080386 to 8080399 13 + TSS region transcription start site region 124233
Tssr124234 14 8095770 to 8095817 47 + TSS region transcription start site region 124234
Cpgi6156 14 8097884 to 8098798 914 CpG island CpG island 6156
Tssr124235 14 8098196 to 8098296 100 + TSS region transcription start site region 124235
Pxk 14 8098211 to 8165117 66906 + protein coding gene PX domain containing serine/threonine kinase
Tssr4245 14 8099599 to 8099614 15 - TSS region transcription start site region 4245
Tssr127397 14 8114396 to 8114436 40 - TSS region transcription start site region 127397
Tssr124236 14 8118160 to 8118171 11 + TSS region transcription start site region 124236
Tssr124237 14 8118172 to 8118187 15 + TSS region transcription start site region 124237
Tssr124238 14 8118213 to 8118220 7 + TSS region transcription start site region 124238
Tssr124239 14 8125243 to 8125245 2 + TSS region transcription start site region 124239
Gm18144 14 8125246 to 8125905 659 + pseudogene predicted gene, 18144
D14Mit110 14 8159438 to 8159575 137 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 110
Pdhb 14 8165991 to 8172992 7001 - protein coding gene pyruvate dehydrogenase (lipoamide) beta
Cpgi6157 14 8172448 to 8173438 990 CpG island CpG island 6157
Tssr127398 14 8172958 to 8172977 19 - TSS region transcription start site region 127398
Tssr127399 14 8172986 to 8173003 17 - TSS region transcription start site region 127399
Cpgi6158 14 8213645 to 8214861 1216 CpG island CpG island 6158
Tssr124240 14 8213997 to 8214039 42 + TSS region transcription start site region 124240
Tssr124241 14 8214135 to 8214181 46 + TSS region transcription start site region 124241
Kctd6 14 8214140 to 8223563 9423 + protein coding gene potassium channel tetramerisation domain containing 6
Tssr124242 14 8214199 to 8214209 10 + TSS region transcription start site region 124242
Acox2 14 8225511 to 8259019 33508 - protein coding gene acyl-Coenzyme A oxidase 2, branched chain
D14Mit276 14 8241582 to 8241700 118 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-276
D14Dcr14 14 8250914 to 8251015 101 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 14
Tssr127400 14 8258037 to 8258062 25 - TSS region transcription start site region 127400
Tssr127401 14 8258068 to 8258098 30 - TSS region transcription start site region 127401
Tssr127402 14 8258800 to 8258813 13 - TSS region transcription start site region 127402
Tssr4246 14 8258835 to 8258840 5 - TSS region transcription start site region 4246
Tssr127403 14 8258881 to 8258903 22 - TSS region transcription start site region 127403
Tssr127404 14 8258910 to 8258954 44 - TSS region transcription start site region 127404
Tssr127405 14 8258961 to 8258977 16 - TSS region transcription start site region 127405
Tssr127406 14 8258979 to 8258991 12 - TSS region transcription start site region 127406
Tssr127407 14 8258996 to 8259001 5 - TSS region transcription start site region 127407
Tssr127408 14 8259007 to 8259024 17 - TSS region transcription start site region 127408
Tssr127409 14 8259262 to 8259283 21 - TSS region transcription start site region 127409
Tssr127410 14 8259291 to 8259313 22 - TSS region transcription start site region 127410
Tssr127411 14 8259325 to 8259378 53 - TSS region transcription start site region 127411