Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:70523387-72315467

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188 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epfpq1 14 21012382 to 71648361 50635979 QTL epididymal fat percentage QTL 1
Sftpc 14 70520949 to 70524081 3132 - protein coding gene surfactant associated protein C
D14Mit33 14 70523236 to 70523528 292 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 33
Tssr129607 14 70523385 to 70523405 20 - TSS region transcription start site region 129607
Tssr129608 14 70523433 to 70523444 11 - TSS region transcription start site region 129608
Tssr129609 14 70523453 to 70523462 9 - TSS region transcription start site region 129609
Lbm10 14 70523856 to 70524089 233 QTL lean body mass 10
D14Mit32 14 70523856 to 70524089 233 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 32
Tssr129610 14 70524068 to 70524084 16 - TSS region transcription start site region 129610
Tssr126438 14 70528505 to 70528546 41 + TSS region transcription start site region 126438
Cpgi6697 14 70530386 to 70531473 1087 CpG island CpG island 6697
Tssr126439 14 70530560 to 70530571 11 + TSS region transcription start site region 126439
Tssr126440 14 70530581 to 70530599 18 + TSS region transcription start site region 126440
Tssr126441 14 70530611 to 70530624 13 + TSS region transcription start site region 126441
Tssr126442 14 70530660 to 70530691 31 + TSS region transcription start site region 126442
Tssr126443 14 70530819 to 70530847 28 + TSS region transcription start site region 126443
Lgi3 14 70530821 to 70538324 7503 + protein coding gene leucine-rich repeat LGI family, member 3
Tssr126444 14 70530849 to 70530879 30 + TSS region transcription start site region 126444
Tssr126445 14 70530899 to 70530910 11 + TSS region transcription start site region 126445
Tssr126446 14 70530996 to 70531003 7 + TSS region transcription start site region 126446
Tssr126447 14 70531620 to 70531630 10 + TSS region transcription start site region 126447
Tssr126448 14 70531652 to 70531673 21 + TSS region transcription start site region 126448
Tssr126449 14 70531677 to 70531693 16 + TSS region transcription start site region 126449
Tssr126450 14 70531701 to 70531712 11 + TSS region transcription start site region 126450
Tssr126451 14 70534409 to 70534421 12 + TSS region transcription start site region 126451
Tssr129611 14 70536084 to 70536128 44 - TSS region transcription start site region 129611
Tssr126452 14 70536204 to 70536228 24 + TSS region transcription start site region 126452
Cpgi6698 14 70536318 to 70536821 503 CpG island CpG island 6698
Tssr129612 14 70540776 to 70540787 11 - TSS region transcription start site region 129612
Tssr126453 14 70544630 to 70544665 35 + TSS region transcription start site region 126453
Cpgi6699 14 70545085 to 70545733 648 CpG island CpG island 6699
Tssr126454 14 70545219 to 70545236 17 + TSS region transcription start site region 126454
Reep4 14 70545251 to 70548933 3682 + protein coding gene receptor accessory protein 4
Tssr126455 14 70545261 to 70545269 8 + TSS region transcription start site region 126455
Tssr126456 14 70545283 to 70545340 57 + TSS region transcription start site region 126456
Tssr126457 14 70545348 to 70545359 11 + TSS region transcription start site region 126457
Tssr126458 14 70545385 to 70545394 9 + TSS region transcription start site region 126458
Tssr126459 14 70545440 to 70545457 17 + TSS region transcription start site region 126459
Tssr126460 14 70546475 to 70546486 11 + TSS region transcription start site region 126460
Tssr126461 14 70552190 to 70552230 40 + TSS region transcription start site region 126461
Tssr126462 14 70552239 to 70552252 13 + TSS region transcription start site region 126462
Tssr126463 14 70552255 to 70552264 9 + TSS region transcription start site region 126463
Cpgi6700 14 70554040 to 70555542 1502 CpG island CpG island 6700
Hr 14 70554056 to 70573548 19492 + protein coding gene lysine demethylase and nuclear receptor corepressor
Tssr126464 14 70554228 to 70554239 11 + TSS region transcription start site region 126464
Tssr126465 14 70554393 to 70554402 9 + TSS region transcription start site region 126465
Tssr126466 14 70554498 to 70554503 5 + TSS region transcription start site region 126466
Tssr126467 14 70554523 to 70554528 5 + TSS region transcription start site region 126467
Tssr126468 14 70554542 to 70554560 18 + TSS region transcription start site region 126468
Tssr126469 14 70563473 to 70563507 34 + TSS region transcription start site region 126469
Tssr126470 14 70571122 to 70571130 8 + TSS region transcription start site region 126470
Tssr126471 14 70573843 to 70573847 4 + TSS region transcription start site region 126471
Cpgi6701 14 70577375 to 70578409 1034 CpG island CpG island 6701
Tssr126472 14 70577810 to 70577838 28 + TSS region transcription start site region 126472
Nudt18 14 70577837 to 70582571 4734 + protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 18
Tssr126473 14 70577839 to 70577891 52 + TSS region transcription start site region 126473
Fam160b2 14 70583296 to 70599835 16539 - protein coding gene family with sequence similarity 160, member B2
Cpgi6702 14 70599088 to 70600066 978 CpG island CpG island 6702
B930095I24Rik 14 70599414 to 70600261 847 protein coding gene RIKEN cDNA B930095I24Rik gene
Tssr4471 14 70599558 to 70599569 11 - TSS region transcription start site region 4471
Tssr129613 14 70599801 to 70599812 11 - TSS region transcription start site region 129613
Tssr129614 14 70599813 to 70599831 18 - TSS region transcription start site region 129614
Tssr129615 14 70599832 to 70599887 55 - TSS region transcription start site region 129615
Dmtn 14 70602184 to 70636048 33864 - protein coding gene dematin actin binding protein
Cpgi6703 14 70604504 to 70604859 355 CpG island CpG island 6703
Tssr129616 14 70617714 to 70617719 5 - TSS region transcription start site region 129616
Cpgi6704 14 70617930 to 70618631 701 CpG island CpG island 6704
Tssr129617 14 70618540 to 70618574 34 - TSS region transcription start site region 129617
Tssr129618 14 70618631 to 70618641 10 - TSS region transcription start site region 129618
Tssr126474 14 70619127 to 70619159 32 + TSS region transcription start site region 126474
Tssr129619 14 70619970 to 70619971 1 - TSS region transcription start site region 129619
Tssr129620 14 70626838 to 70626849 11 - TSS region transcription start site region 129620
Tssr129621 14 70626865 to 70626899 34 - TSS region transcription start site region 129621
Tssr129622 14 70627008 to 70627070 62 - TSS region transcription start site region 129622
Cpgi6705 14 70627069 to 70627364 295 CpG island CpG island 6705
Tssr129623 14 70627081 to 70627086 5 - TSS region transcription start site region 129623
Tssr129624 14 70627091 to 70627098 7 - TSS region transcription start site region 129624
Tssr129625 14 70627225 to 70627236 11 - TSS region transcription start site region 129625
Tssr129626 14 70627443 to 70627466 23 - TSS region transcription start site region 129626
Tssr129627 14 70628945 to 70629031 86 - TSS region transcription start site region 129627
Tssr129628 14 70629050 to 70629061 11 - TSS region transcription start site region 129628
Tssr129629 14 70630149 to 70630185 36 - TSS region transcription start site region 129629
Tssr129630 14 70630195 to 70630206 11 - TSS region transcription start site region 129630
Tssr126475 14 70635207 to 70635214 7 + TSS region transcription start site region 126475
Cpgi6706 14 70635695 to 70636020 325 CpG island CpG island 6706
Tssr129631 14 70635853 to 70635879 26 - TSS region transcription start site region 129631
Tssr129632 14 70635946 to 70635969 23 - TSS region transcription start site region 129632
Gm38605 14 70636058 to 70638564 2506 + lncRNA gene predicted gene, 38605
Tssr126476 14 70636110 to 70636123 13 + TSS region transcription start site region 126476
Fgf17 14 70636203 to 70642268 6065 - protein coding gene fibroblast growth factor 17
Cpgi6707 14 70636693 to 70637052 359 CpG island CpG island 6707
Cpgi6708 14 70641889 to 70642314 425 CpG island CpG island 6708
Tssr129633 14 70642156 to 70642188 32 - TSS region transcription start site region 129633
Tssr129634 14 70642262 to 70642285 23 - TSS region transcription start site region 129634
Tssr129635 14 70642300 to 70642323 23 - TSS region transcription start site region 129635
Npm2 14 70647302 to 70659244 11942 - protein coding gene nucleophosmin/nucleoplasmin 2
Tssr129636 14 70653081 to 70653086 5 - TSS region transcription start site region 129636
Xpo7 14 70654246 to 70766628 112382 - protein coding gene exportin 7
Cpgi6709 14 70659153 to 70659719 566 CpG island CpG island 6709
Tssr126477 14 70659360 to 70659386 26 + TSS region transcription start site region 126477
Tssr129637 14 70659781 to 70659791 10 - TSS region transcription start site region 129637
Tssr129638 14 70659799 to 70659811 12 - TSS region transcription start site region 129638
Gm49244 14 70674450 to 70674891 441 + pseudogene predicted gene, 49244
Tssr129639 14 70677334 to 70677340 6 - TSS region transcription start site region 129639
Fgf23lq3 14 70700000 to 70700000 0 QTL FGF23 serum level QTL 3
Tssr4472 14 70707978 to 70707986 8 - TSS region transcription start site region 4472
Tssr129640 14 70707994 to 70708011 17 - TSS region transcription start site region 129640
Tssr129641 14 70708017 to 70708030 13 - TSS region transcription start site region 129641
Tssr129642 14 70708034 to 70708037 3 - TSS region transcription start site region 129642
Gm9171 14 70722825 to 70725124 2299 - pseudogene predicted gene 9171
Tssr129643 14 70754555 to 70754556 1 - TSS region transcription start site region 129643
Cpgi6710 14 70765768 to 70767412 1644 CpG island CpG island 6710
Dok2 14 70766037 to 70778494 12457 + protein coding gene docking protein 2
Tssr129644 14 70766534 to 70766564 30 - TSS region transcription start site region 129644
Tssr129645 14 70766598 to 70766644 46 - TSS region transcription start site region 129645
Tssr126478 14 70773247 to 70773258 11 + TSS region transcription start site region 126478
Tssr126479 14 70773262 to 70773301 39 + TSS region transcription start site region 126479
F630201L12Rik 14 70773752 to 70777140 3388 unclassified gene RIKEN cDNA F630201L12 gene
Tssr126480 14 70774338 to 70774353 15 + TSS region transcription start site region 126480
Tssr126481 14 70774356 to 70774370 14 + TSS region transcription start site region 126481
Tssr126482 14 70774375 to 70774401 26 + TSS region transcription start site region 126482
Tssr126483 14 70774412 to 70774423 11 + TSS region transcription start site region 126483
Tssr126484 14 70774601 to 70774610 9 + TSS region transcription start site region 126484
Tssr126485 14 70774973 to 70774984 11 + TSS region transcription start site region 126485
Tssr126486 14 70776171 to 70776178 7 + TSS region transcription start site region 126486
Tssr126487 14 70776222 to 70776231 9 + TSS region transcription start site region 126487
Tssr129646 14 70777853 to 70777860 7 - TSS region transcription start site region 129646
Cpgi6711 14 70780994 to 70781162 168 CpG island CpG island 6711
Gm34442 14 70790574 to 70801984 11410 + lncRNA gene predicted gene, 34442
Gm34500 14 70828405 to 70850391 21986 - lncRNA gene predicted gene, 34500
2410012E07Rik 14 70852933 to 70873954 21021 + lincRNA gene RIKEN cDNA 2410012E07 gene
Cpgi6712 14 70888593 to 70888821 228 CpG island CpG island 6712
Cpgi6713 14 70889511 to 70890721 1210 CpG island CpG island 6713
Tssr126488 14 70890031 to 70890038 7 + TSS region transcription start site region 126488
Tssr126489 14 70890099 to 70890130 31 + TSS region transcription start site region 126489
Gfra2 14 70890120 to 70979838 89718 + protein coding gene glial cell line derived neurotrophic factor family receptor alpha 2
Tssr126490 14 70890287 to 70890290 3 + TSS region transcription start site region 126490
Tssr126491 14 70890436 to 70890467 31 + TSS region transcription start site region 126491
Tssr126492 14 70890660 to 70890711 51 + TSS region transcription start site region 126492
Cpgi6714 14 70890895 to 70891478 583 CpG island CpG island 6714
Tssr129647 14 70924164 to 70924169 5 - TSS region transcription start site region 129647
Gm34588 14 70924205 to 70941905 17700 - lncRNA gene predicted gene, 34588
Cpgi6715 14 70925632 to 70926138 506 CpG island CpG island 6715
Tssr129648 14 70925824 to 70925858 34 - TSS region transcription start site region 129648
Tssr126493 14 70925891 to 70925904 13 + TSS region transcription start site region 126493
Tssr126494 14 70941880 to 70941908 28 + TSS region transcription start site region 126494
Tssr126495 14 70941909 to 70941916 7 + TSS region transcription start site region 126495
Tssr126496 14 70965543 to 70965568 25 + TSS region transcription start site region 126496
Tssr126497 14 70977263 to 70977273 10 + TSS region transcription start site region 126497
Tssr126498 14 70978478 to 70978505 27 + TSS region transcription start site region 126498
Tssr126499 14 70978508 to 70978545 37 + TSS region transcription start site region 126499
Gm34703 14 70993868 to 70994717 849 - lncRNA gene predicted gene, 34703
Tssr129649 14 70994412 to 70994423 11 - TSS region transcription start site region 129649
Tssr4473 14 70994436 to 70994463 27 - TSS region transcription start site region 4473
Tssr129650 14 70994486 to 70994497 11 - TSS region transcription start site region 129650
Tssr129651 14 70994597 to 70994607 10 - TSS region transcription start site region 129651
Tssr129652 14 70994621 to 70994632 11 - TSS region transcription start site region 129652
Gm49289 14 71087270 to 71147008 59738 + lincRNA gene predicted gene, 49289
Gm34757 14 71163830 to 71167244 3414 - lncRNA gene predicted gene, 34757
Tssr126500 14 71237389 to 71237392 3 + TSS region transcription start site region 126500
Tssr126501 14 71251264 to 71251284 20 + TSS region transcription start site region 126501
Gm4251 14 71251273 to 71271051 19778 + lincRNA gene predicted gene 4251
Tssr4474 14 71263770 to 71263773 3 - TSS region transcription start site region 4474
Gm37455 14 71371002 to 71371530 528 - unclassified gene predicted gene, 37455
Gm41203 14 71418387 to 71420467 2080 - lncRNA gene predicted gene, 41203
Tssr4475 14 71420991 to 71420995 4 + TSS region transcription start site region 4475
Tssr126502 14 71421006 to 71421017 11 + TSS region transcription start site region 126502
4930429C20Rik 14 71421012 to 71421611 599 + lincRNA gene RIKEN cDNA 4930429C20 gene
D14Mit193 14 71521620 to 71521737 117 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 193
Gm34819 14 71620507 to 71733827 113320 + lncRNA gene predicted gene, 34819
D14Mit34 14 71648206 to 71648361 155 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 34
Gm34998 14 71769931 to 71839271 69340 + lncRNA gene predicted gene, 34998
Gm9192 14 71819567 to 71820551 984 - pseudogene predicted gene 9192
4921504P05Rik 14 71844422 to 71845694 1272 unclassified gene RIKEN cDNA 4921504P05 gene
4930434J06Rik 14 71856709 to 71920438 63729 + lincRNA gene RIKEN cDNA 4930434J06 gene
Tssr126503 14 71856710 to 71856717 7 + TSS region transcription start site region 126503
Tssr126504 14 71880681 to 71880715 34 + TSS region transcription start site region 126504
Tssr126505 14 71903640 to 71903646 6 + TSS region transcription start site region 126505
D14Mit192 14 71917404 to 71917665 261 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 192
1700003K11Rik 14 71946793 to 71947212 419 unclassified gene RIKEN cDNA 1700003K11 gene
Cpgi6716 14 71967001 to 71967442 441 CpG island CpG island 6716
Gm35079 14 72039792 to 72042936 3144 - lncRNA gene predicted gene, 35079
Gm41204 14 72115878 to 72131897 16019 - lncRNA gene predicted gene, 41204
Gm23735 14 72131088 to 72131221 133 + snRNA gene predicted gene, 23735
Gm41205 14 72158560 to 72184524 25964 - lncRNA gene predicted gene, 41205
Gm49290 14 72195317 to 72195696 379 - pseudogene predicted gene, 49290
D14Mit90 14 72275767 to 72275854 87 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 90
Tssr129653 14 72284518 to 72284528 10 - TSS region transcription start site region 129653